EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000002875 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 73784 bases
Position: chrJH603267.1:2789693-2863476
Accession: 101818436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000002994	UvrD-helicase	PF00580.21	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003007	TRANK1-201	11519	-	ENSFALP00000002994	2970 (aa)	XP_005041356	U3JJP0

Gene Model

Click here to download ENSFALG00000002875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000002875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000002875	TRANK1	84	78.896	ENSAPLG00000010356	TRANK1	100	78.896	Anas_platyrhynchos
ENSFALG00000002875	TRANK1	54	58.449	ENSCAFG00020001387	TRANK1	99	58.449	Canis_lupus_dingo
ENSFALG00000002875	TRANK1	99	56.551	ENSTSYG00000025860	TRANK1	99	56.528	Carlito_syrichta
ENSFALG00000002875	TRANK1	99	56.155	ENSCLAG00000003643	TRANK1	99	56.026	Chinchilla_lanigera
ENSFALG00000002875	TRANK1	98	66.556	ENSCPBG00000013529	TRANK1	100	66.667	Chrysemys_picta_bellii
ENSFALG00000002875	TRANK1	99	57.409	ENSCANG00000039915	TRANK1	99	57.506	Colobus_angolensis_palliatus
ENSFALG00000002875	TRANK1	98	57.080	ENSDNOG00000003573	TRANK1	99	57.056	Dasypus_novemcinctus
ENSFALG00000002875	TRANK1	99	57.219	ENSEASG00005007374	TRANK1	99	60.192	Equus_asinus_asinus
ENSFALG00000002875	TRANK1	99	57.532	ENSECAG00000018264	TRANK1	99	57.571	Equus_caballus
ENSFALG00000002875	TRANK1	81	57.079	ENSEEUG00000008528	TRANK1	99	57.242	Erinaceus_europaeus
ENSFALG00000002875	TRANK1	74	79.915	ENSGALG00000037629	TRANK1	100	80.189	Gallus_gallus
ENSFALG00000002875	TRANK1	90	65.885	ENSGAGG00000009012	TRANK1	99	65.864	Gopherus_agassizii
ENSFALG00000002875	TRANK1	99	45.696	ENSLOCG00000004808	TRANK1	99	45.898	Lepisosteus_oculatus
ENSFALG00000002875	TRANK1	99	78.625	ENSMGAG00000011934	TRANK1	99	78.625	Meleagris_gallopavo
ENSFALG00000002875	TRANK1	99	56.925	ENSMLUG00000003537	TRANK1	99	56.925	Myotis_lucifugus
ENSFALG00000002875	TRANK1	98	56.233	ENSODEG00000003882	TRANK1	97	56.203	Octodon_degus
ENSFALG00000002875	TRANK1	99	64.099	ENSPSIG00000010217	TRANK1	100	64.088	Pelodiscus_sinensis
ENSFALG00000002875	TRANK1	65	60.840	ENSPCAG00000002172	-	87	60.840	Procavia_capensis
ENSFALG00000002875	TRANK1	80	55.203	ENSPVAG00000004199	TRANK1	99	55.044	Pteropus_vampyrus
ENSFALG00000002875	TRANK1	99	57.361	ENSRBIG00000012281	TRANK1	99	57.506	Rhinopithecus_bieti
ENSFALG00000002875	TRANK1	99	57.327	ENSRROG00000044487	TRANK1	99	57.472	Rhinopithecus_roxellana
ENSFALG00000002875	TRANK1	60	62.999	ENSSARG00000007861	-	74	62.910	Sorex_araneus
ENSFALG00000002875	TRANK1	72	66.283	ENSSPUG00000015974	TRANK1	92	74.957	Sphenodon_punctatus
ENSFALG00000002875	TRANK1	83	93.000	ENSTGUG00000005694	TRANK1	100	93.000	Taeniopygia_guttata
ENSFALG00000002875	TRANK1	54	58.977	ENSUAMG00000027609	-	99	59.221	Ursus_americanus
ENSFALG00000002875	TRANK1	54	59.155	ENSUMAG00000006416	TRANK1	99	59.400	Ursus_maritimus
ENSFALG00000002875	TRANK1	54	58.100	ENSVVUG00000007788	TRANK1	99	58.100	Vulpes_vulpes