EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003047 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 32236 bases
Position: chrJH603197.1:6990449-7022684
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003174	EST1	PF10374.9	3.2e-25	1	1
ENSFALP00000003174	EST1_DNA_bind	PF10373.9	1.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003187	SMG7-201	6022	-	ENSFALP00000003174	1135 (aa)	-	U3JK70

Gene Model

Click here to download ENSFALG00000003047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003047	SMG7	98	86.024	ENSG00000116698	SMG7	100	86.111	Homo_sapiens
ENSFALG00000003047	SMG7	76	74.847	ENSAPOG00000009611	smg7	80	74.847	Acanthochromis_polyacanthus
ENSFALG00000003047	SMG7	98	85.764	ENSAMEG00000002357	SMG7	100	85.764	Ailuropoda_melanoleuca
ENSFALG00000003047	SMG7	79	73.246	ENSACIG00000015152	smg7	97	71.500	Amphilophus_citrinellus
ENSFALG00000003047	SMG7	61	74.037	ENSAOCG00000013538	smg7	99	65.008	Amphiprion_ocellaris
ENSFALG00000003047	SMG7	61	73.894	ENSAPEG00000007851	smg7	99	65.062	Amphiprion_percula
ENSFALG00000003047	SMG7	100	61.360	ENSATEG00000006931	smg7	99	61.653	Anabas_testudineus
ENSFALG00000003047	SMG7	100	89.608	ENSAPLG00000015811	SMG7	98	89.608	Anas_platyrhynchos
ENSFALG00000003047	SMG7	100	85.763	ENSACAG00000014989	SMG7	98	86.271	Anolis_carolinensis
ENSFALG00000003047	SMG7	100	86.468	ENSANAG00000028114	SMG7	98	86.553	Aotus_nancymaae
ENSFALG00000003047	SMG7	100	64.304	ENSACLG00000022079	smg7	99	63.826	Astatotilapia_calliptera
ENSFALG00000003047	SMG7	61	76.335	ENSAMXG00000020809	smg7	99	66.779	Astyanax_mexicanus
ENSFALG00000003047	SMG7	100	82.283	ENSBTAG00000008003	SMG7	98	81.090	Bos_taurus
ENSFALG00000003047	SMG7	100	86.298	ENSCJAG00000005135	SMG7	99	85.872	Callithrix_jacchus
ENSFALG00000003047	SMG7	100	83.078	ENSCAFG00000013276	SMG7	96	82.738	Canis_familiaris
ENSFALG00000003047	SMG7	100	85.969	ENSCAFG00020015475	SMG7	98	85.629	Canis_lupus_dingo
ENSFALG00000003047	SMG7	100	82.283	ENSCHIG00000018192	SMG7	98	82.483	Capra_hircus
ENSFALG00000003047	SMG7	98	85.764	ENSTSYG00000002667	SMG7	100	85.764	Carlito_syrichta
ENSFALG00000003047	SMG7	100	82.568	ENSCPOG00000008906	SMG7	99	82.908	Cavia_porcellus
ENSFALG00000003047	SMG7	98	86.186	ENSCCAG00000028596	SMG7	100	86.273	Cebus_capucinus
ENSFALG00000003047	SMG7	98	86.111	ENSCATG00000011063	SMG7	100	86.198	Cercocebus_atys
ENSFALG00000003047	SMG7	100	82.908	ENSCLAG00000010751	SMG7	98	82.908	Chinchilla_lanigera
ENSFALG00000003047	SMG7	100	83.163	ENSCSAG00000012654	SMG7	96	83.248	Chlorocebus_sabaeus
ENSFALG00000003047	SMG7	93	74.909	ENSCHOG00000010522	SMG7	93	75.364	Choloepus_hoffmanni
ENSFALG00000003047	SMG7	100	89.541	ENSCPBG00000015724	SMG7	98	89.541	Chrysemys_picta_bellii
ENSFALG00000003047	SMG7	98	86.024	ENSCANG00000015680	SMG7	100	86.111	Colobus_angolensis_palliatus
ENSFALG00000003047	SMG7	100	82.568	ENSCGRG00001013705	Smg7	98	82.653	Cricetulus_griseus_chok1gshd
ENSFALG00000003047	SMG7	100	82.568	ENSCGRG00000018401	Smg7	98	82.653	Cricetulus_griseus_crigri
ENSFALG00000003047	SMG7	100	62.500	ENSCVAG00000011842	smg7	97	67.000	Cyprinodon_variegatus
ENSFALG00000003047	SMG7	100	61.564	ENSDARG00000060767	smg7	99	65.714	Danio_rerio
ENSFALG00000003047	SMG7	100	82.228	ENSDORG00000007331	Smg7	98	82.313	Dipodomys_ordii
ENSFALG00000003047	SMG7	97	82.177	ENSETEG00000002654	SMG7	98	82.704	Echinops_telfairi
ENSFALG00000003047	SMG7	100	83.418	ENSEASG00005006524	SMG7	98	83.503	Equus_asinus_asinus
ENSFALG00000003047	SMG7	93	98.119	ENSECAG00000004313	SMG7	96	97.819	Equus_caballus
ENSFALG00000003047	SMG7	96	82.322	ENSEEUG00000002024	SMG7	92	82.058	Erinaceus_europaeus
ENSFALG00000003047	SMG7	100	66.027	ENSELUG00000010293	smg7	99	66.027	Esox_lucius
ENSFALG00000003047	SMG7	100	83.418	ENSFCAG00000010900	SMG7	98	88.442	Felis_catus
ENSFALG00000003047	SMG7	100	82.398	ENSFDAG00000012121	SMG7	99	82.809	Fukomys_damarensis
ENSFALG00000003047	SMG7	100	60.873	ENSFHEG00000011073	smg7	99	59.866	Fundulus_heteroclitus
ENSFALG00000003047	SMG7	83	73.786	ENSGMOG00000004916	smg7	85	73.786	Gadus_morhua
ENSFALG00000003047	SMG7	100	89.021	ENSGALG00000004667	SMG7	98	88.766	Gallus_gallus
ENSFALG00000003047	SMG7	100	60.892	ENSGAFG00000019000	smg7	99	60.135	Gambusia_affinis
ENSFALG00000003047	SMG7	98	60.580	ENSGACG00000001634	smg7	94	65.517	Gasterosteus_aculeatus
ENSFALG00000003047	SMG7	98	86.111	ENSGGOG00000002342	SMG7	100	86.198	Gorilla_gorilla
ENSFALG00000003047	SMG7	100	64.304	ENSHBUG00000003726	smg7	96	70.558	Haplochromis_burtoni
ENSFALG00000003047	SMG7	99	82.638	ENSHGLG00000009353	SMG7	100	83.149	Heterocephalus_glaber_female
ENSFALG00000003047	SMG7	100	81.548	ENSHGLG00100009637	-	100	81.447	Heterocephalus_glaber_male
ENSFALG00000003047	SMG7	99	75.574	ENSHGLG00100004878	-	98	75.660	Heterocephalus_glaber_male
ENSFALG00000003047	SMG7	100	65.620	ENSIPUG00000016997	smg7	99	66.610	Ictalurus_punctatus
ENSFALG00000003047	SMG7	100	83.759	ENSSTOG00000000401	SMG7	98	83.759	Ictidomys_tridecemlineatus
ENSFALG00000003047	SMG7	100	82.128	ENSJJAG00000012351	Smg7	98	82.128	Jaculus_jaculus
ENSFALG00000003047	SMG7	100	61.326	ENSLBEG00000002983	smg7	98	61.055	Labrus_bergylta
ENSFALG00000003047	SMG7	53	61.857	ENSLBEG00000005220	-	75	61.857	Labrus_bergylta
ENSFALG00000003047	SMG7	100	72.636	ENSLACG00000000972	SMG7	98	72.148	Latimeria_chalumnae
ENSFALG00000003047	SMG7	100	68.997	ENSLOCG00000002010	smg7	98	68.913	Lepisosteus_oculatus
ENSFALG00000003047	SMG7	100	82.794	ENSLAFG00000008186	SMG7	98	82.993	Loxodonta_africana
ENSFALG00000003047	SMG7	98	86.198	ENSMFAG00000031653	SMG7	100	86.285	Macaca_fascicularis
ENSFALG00000003047	SMG7	99	86.286	ENSMMUG00000018458	SMG7	98	86.371	Macaca_mulatta
ENSFALG00000003047	SMG7	98	86.111	ENSMNEG00000034798	SMG7	100	86.198	Macaca_nemestrina
ENSFALG00000003047	SMG7	98	86.111	ENSMLEG00000037170	SMG7	100	86.198	Mandrillus_leucophaeus
ENSFALG00000003047	SMG7	61	73.466	ENSMAMG00000018733	smg7	84	62.172	Mastacembelus_armatus
ENSFALG00000003047	SMG7	100	64.304	ENSMZEG00005015247	smg7	99	63.826	Maylandia_zebra
ENSFALG00000003047	SMG7	99	88.993	ENSMGAG00000001561	SMG7	99	88.993	Meleagris_gallopavo
ENSFALG00000003047	SMG7	100	82.738	ENSMAUG00000019484	Smg7	99	82.794	Mesocricetus_auratus
ENSFALG00000003047	SMG7	100	85.034	ENSMICG00000007145	SMG7	96	88.384	Microcebus_murinus
ENSFALG00000003047	SMG7	100	81.857	ENSMOCG00000020748	Smg7	98	82.398	Microtus_ochrogaster
ENSFALG00000003047	SMG7	92	68.636	ENSMMOG00000001524	smg7	94	69.500	Mola_mola
ENSFALG00000003047	SMG7	92	82.185	ENSMODG00000007139	SMG7	98	82.185	Monodelphis_domestica
ENSFALG00000003047	SMG7	97	70.149	ENSMALG00000000061	smg7	91	69.652	Monopterus_albus
ENSFALG00000003047	SMG7	100	82.423	MGP_CAROLIEiJ_G0014704	Smg7	98	82.794	Mus_caroli
ENSFALG00000003047	SMG7	100	82.398	ENSMUSG00000042772	Smg7	98	82.483	Mus_musculus
ENSFALG00000003047	SMG7	100	82.398	MGP_PahariEiJ_G0027940	Smg7	98	82.483	Mus_pahari
ENSFALG00000003047	SMG7	100	82.483	MGP_SPRETEiJ_G0015511	Smg7	98	82.568	Mus_spretus
ENSFALG00000003047	SMG7	99	83.064	ENSMPUG00000011732	SMG7	97	83.745	Mustela_putorius_furo
ENSFALG00000003047	SMG7	100	82.143	ENSMLUG00000015417	SMG7	98	82.228	Myotis_lucifugus
ENSFALG00000003047	SMG7	100	82.653	ENSNGAG00000009836	Smg7	99	81.841	Nannospalax_galili
ENSFALG00000003047	SMG7	99	57.890	ENSNBRG00000024343	smg7	97	69.849	Neolamprologus_brichardi
ENSFALG00000003047	SMG7	98	86.198	ENSNLEG00000018018	SMG7	100	86.285	Nomascus_leucogenys
ENSFALG00000003047	SMG7	70	90.650	ENSMEUG00000004681	SMG7	72	90.650	Notamacropus_eugenii
ENSFALG00000003047	SMG7	97	74.425	ENSOPRG00000013942	SMG7	95	74.159	Ochotona_princeps
ENSFALG00000003047	SMG7	100	82.653	ENSODEG00000010390	SMG7	98	83.078	Octodon_degus
ENSFALG00000003047	SMG7	100	61.571	ENSONIG00000000277	smg7	99	61.153	Oreochromis_niloticus
ENSFALG00000003047	SMG7	100	83.022	ENSOANG00000000994	SMG7	100	83.616	Ornithorhynchus_anatinus
ENSFALG00000003047	SMG7	100	77.551	ENSOCUG00000005887	SMG7	91	77.806	Oryctolagus_cuniculus
ENSFALG00000003047	SMG7	100	63.203	ENSORLG00000007314	smg7	99	62.596	Oryzias_latipes
ENSFALG00000003047	SMG7	100	63.458	ENSORLG00020015779	smg7	99	62.852	Oryzias_latipes_hni
ENSFALG00000003047	SMG7	100	63.721	ENSORLG00015012289	smg7	99	62.681	Oryzias_latipes_hsok
ENSFALG00000003047	SMG7	100	63.621	ENSOMEG00000002328	smg7	99	63.104	Oryzias_melastigma
ENSFALG00000003047	SMG7	97	82.513	ENSOGAG00000003107	SMG7	92	83.128	Otolemur_garnettii
ENSFALG00000003047	SMG7	100	82.368	ENSOARG00000001352	SMG7	96	82.568	Ovis_aries
ENSFALG00000003047	SMG7	98	86.198	ENSPPAG00000031619	SMG7	100	86.285	Pan_paniscus
ENSFALG00000003047	SMG7	100	83.588	ENSPPRG00000011222	SMG7	98	82.398	Panthera_pardus
ENSFALG00000003047	SMG7	98	86.372	ENSPTIG00000007242	SMG7	100	86.285	Panthera_tigris_altaica
ENSFALG00000003047	SMG7	98	86.198	ENSPTRG00000001764	SMG7	100	86.285	Pan_troglodytes
ENSFALG00000003047	SMG7	100	83.333	ENSPANG00000004520	SMG7	98	82.228	Papio_anubis
ENSFALG00000003047	SMG7	100	65.897	ENSPKIG00000007242	smg7	98	68.528	Paramormyrops_kingsleyae
ENSFALG00000003047	SMG7	100	85.580	ENSPSIG00000012201	SMG7	99	85.690	Pelodiscus_sinensis
ENSFALG00000003047	SMG7	57	55.051	ENSPMGG00000021833	smg7	91	52.736	Periophthalmus_magnuspinnatus
ENSFALG00000003047	SMG7	100	82.143	ENSPEMG00000011315	Smg7	98	82.228	Peromyscus_maniculatus_bairdii
ENSFALG00000003047	SMG7	100	86.650	ENSPCIG00000003786	SMG7	98	88.945	Phascolarctos_cinereus
ENSFALG00000003047	SMG7	100	62.636	ENSPFOG00000019219	smg7	99	62.385	Poecilia_formosa
ENSFALG00000003047	SMG7	100	60.840	ENSPLAG00000001446	smg7	99	59.916	Poecilia_latipinna
ENSFALG00000003047	SMG7	97	59.931	ENSPMEG00000005218	smg7	98	58.977	Poecilia_mexicana
ENSFALG00000003047	SMG7	87	61.591	ENSPREG00000019039	smg7	92	59.981	Poecilia_reticulata
ENSFALG00000003047	SMG7	100	82.228	ENSPPYG00000000427	SMG7	98	82.313	Pongo_abelii
ENSFALG00000003047	SMG7	96	72.647	ENSPCAG00000008360	SMG7	94	72.647	Procavia_capensis
ENSFALG00000003047	SMG7	100	83.673	ENSPCOG00000011996	SMG7	98	82.823	Propithecus_coquereli
ENSFALG00000003047	SMG7	92	77.819	ENSPVAG00000000851	SMG7	88	78.281	Pteropus_vampyrus
ENSFALG00000003047	SMG7	100	64.495	ENSPNYG00000007643	smg7	99	63.933	Pundamilia_nyererei
ENSFALG00000003047	SMG7	79	73.267	ENSPNAG00000011374	smg7	97	72.727	Pygocentrus_nattereri
ENSFALG00000003047	SMG7	100	82.413	ENSRNOG00000027962	Smg7	100	84.389	Rattus_norvegicus
ENSFALG00000003047	SMG7	98	86.024	ENSRBIG00000036316	SMG7	100	86.111	Rhinopithecus_bieti
ENSFALG00000003047	SMG7	98	86.024	ENSRROG00000035719	SMG7	100	86.111	Rhinopithecus_roxellana
ENSFALG00000003047	SMG7	98	86.099	ENSSBOG00000023454	SMG7	100	86.186	Saimiri_boliviensis_boliviensis
ENSFALG00000003047	SMG7	100	81.973	ENSSHAG00000013147	SMG7	98	81.903	Sarcophilus_harrisii
ENSFALG00000003047	SMG7	93	77.604	ENSSFOG00015017252	smg7	99	77.604	Scleropages_formosus
ENSFALG00000003047	SMG7	100	64.726	ENSSMAG00000006067	smg7	94	70.500	Scophthalmus_maximus
ENSFALG00000003047	SMG7	98	72.831	ENSSDUG00000017543	smg7	99	60.281	Seriola_dumerili
ENSFALG00000003047	SMG7	100	84.014	ENSSPUG00000002064	SMG7	98	84.014	Sphenodon_punctatus
ENSFALG00000003047	SMG7	99	62.394	ENSSPAG00000008733	smg7	95	71.144	Stegastes_partitus
ENSFALG00000003047	SMG7	100	83.163	ENSSSCG00000015558	SMG7	98	83.248	Sus_scrofa
ENSFALG00000003047	SMG7	100	91.056	ENSTGUG00000003928	SMG7	99	91.056	Taeniopygia_guttata
ENSFALG00000003047	SMG7	100	59.852	ENSTNIG00000002802	smg7	99	59.457	Tetraodon_nigroviridis
ENSFALG00000003047	SMG7	78	89.496	ENSTBEG00000003220	SMG7	74	89.496	Tupaia_belangeri
ENSFALG00000003047	SMG7	97	82.002	ENSTTRG00000014778	SMG7	93	81.651	Tursiops_truncatus
ENSFALG00000003047	SMG7	98	78.559	ENSUAMG00000017473	SMG7	100	78.559	Ursus_americanus
ENSFALG00000003047	SMG7	98	82.726	ENSUMAG00000016389	SMG7	100	82.726	Ursus_maritimus
ENSFALG00000003047	SMG7	100	83.163	ENSVVUG00000008976	SMG7	98	85.930	Vulpes_vulpes
ENSFALG00000003047	SMG7	100	66.049	ENSXETG00000012528	smg7	99	65.767	Xenopus_tropicalis
ENSFALG00000003047	SMG7	100	61.144	ENSXMAG00000007123	smg7	99	60.134	Xiphophorus_maculatus