EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003211 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2446 bases
Position: chrJH603203.1:200252-202697
Accession: 101820881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003345	PseudoU_synth_2	PF00849.22	8.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003358	RPUSD1-201	1086	-	ENSFALP00000003345	300 (aa)	XP_016157481	U3JKP1

Gene Model

Click here to download ENSFALG00000003211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003211	RPUSD1	100	63.666	ENSG00000007376	RPUSD1	100	76.190	Homo_sapiens
ENSFALG00000003211	RPUSD1	99	62.126	ENSAPOG00000022221	rpusd1	98	62.458	Acanthochromis_polyacanthus
ENSFALG00000003211	RPUSD1	100	68.212	ENSAMEG00000007461	RPUSD1	99	68.212	Ailuropoda_melanoleuca
ENSFALG00000003211	RPUSD1	99	64.590	ENSACIG00000015863	rpusd1	98	64.590	Amphilophus_citrinellus
ENSFALG00000003211	RPUSD1	99	62.829	ENSAOCG00000021975	rpusd1	95	63.816	Amphiprion_ocellaris
ENSFALG00000003211	RPUSD1	99	63.158	ENSAPEG00000001316	rpusd1	95	64.145	Amphiprion_percula
ENSFALG00000003211	RPUSD1	99	62.500	ENSATEG00000002984	rpusd1	98	65.132	Anabas_testudineus
ENSFALG00000003211	RPUSD1	78	81.092	ENSAPLG00000012316	RPUSD1	98	81.092	Anas_platyrhynchos
ENSFALG00000003211	RPUSD1	100	77.000	ENSACAG00000008953	RPUSD1	100	77.000	Anolis_carolinensis
ENSFALG00000003211	RPUSD1	100	64.839	ENSANAG00000024709	RPUSD1	99	65.385	Aotus_nancymaae
ENSFALG00000003211	RPUSD1	99	62.300	ENSACLG00000013692	rpusd1	98	63.399	Astatotilapia_calliptera
ENSFALG00000003211	RPUSD1	100	62.667	ENSAMXG00000019802	rpusd1	100	62.667	Astyanax_mexicanus
ENSFALG00000003211	RPUSD1	100	67.213	ENSBTAG00000000179	RPUSD1	99	67.213	Bos_taurus
ENSFALG00000003211	RPUSD1	100	64.516	ENSCJAG00000012253	RPUSD1	99	64.516	Callithrix_jacchus
ENSFALG00000003211	RPUSD1	100	66.887	ENSCAFG00000019614	RPUSD1	99	66.887	Canis_familiaris
ENSFALG00000003211	RPUSD1	100	66.887	ENSCAFG00020008891	RPUSD1	99	66.887	Canis_lupus_dingo
ENSFALG00000003211	RPUSD1	100	67.869	ENSCHIG00000012872	RPUSD1	99	67.869	Capra_hircus
ENSFALG00000003211	RPUSD1	100	64.590	ENSTSYG00000036934	RPUSD1	100	70.229	Carlito_syrichta
ENSFALG00000003211	RPUSD1	100	65.677	ENSCAPG00000014219	RPUSD1	99	65.677	Cavia_aperea
ENSFALG00000003211	RPUSD1	100	65.677	ENSCPOG00000034604	RPUSD1	99	65.677	Cavia_porcellus
ENSFALG00000003211	RPUSD1	100	64.194	ENSCCAG00000034385	RPUSD1	99	64.630	Cebus_capucinus
ENSFALG00000003211	RPUSD1	100	64.194	ENSCATG00000042983	RPUSD1	89	78.448	Cercocebus_atys
ENSFALG00000003211	RPUSD1	100	65.574	ENSCLAG00000013966	RPUSD1	99	65.902	Chinchilla_lanigera
ENSFALG00000003211	RPUSD1	100	64.078	ENSCSAG00000012121	RPUSD1	99	64.078	Chlorocebus_sabaeus
ENSFALG00000003211	RPUSD1	99	82.450	ENSCPBG00000021101	RPUSD1	99	82.450	Chrysemys_picta_bellii
ENSFALG00000003211	RPUSD1	84	72.157	ENSCANG00000028576	RPUSD1	89	78.448	Colobus_angolensis_palliatus
ENSFALG00000003211	RPUSD1	100	68.301	ENSCGRG00001014253	Rpusd1	99	68.301	Cricetulus_griseus_chok1gshd
ENSFALG00000003211	RPUSD1	100	68.301	ENSCGRG00000017995	Rpusd1	99	68.301	Cricetulus_griseus_crigri
ENSFALG00000003211	RPUSD1	100	63.333	ENSCSEG00000018512	rpusd1	100	63.333	Cynoglossus_semilaevis
ENSFALG00000003211	RPUSD1	99	65.886	ENSCVAG00000022746	rpusd1	98	65.886	Cyprinodon_variegatus
ENSFALG00000003211	RPUSD1	100	69.637	ENSDARG00000060192	rpusd1	100	69.637	Danio_rerio
ENSFALG00000003211	RPUSD1	100	64.918	ENSDNOG00000003721	RPUSD1	99	65.049	Dasypus_novemcinctus
ENSFALG00000003211	RPUSD1	100	65.894	ENSDORG00000026656	Rpusd1	99	67.763	Dipodomys_ordii
ENSFALG00000003211	RPUSD1	98	46.926	ENSEBUG00000008767	rpusd1	93	46.926	Eptatretus_burgeri
ENSFALG00000003211	RPUSD1	100	64.217	ENSEASG00005018421	RPUSD1	75	64.217	Equus_asinus_asinus
ENSFALG00000003211	RPUSD1	99	62.171	ENSELUG00000014307	rpusd1	88	63.158	Esox_lucius
ENSFALG00000003211	RPUSD1	100	66.225	ENSFCAG00000010359	RPUSD1	99	66.225	Felis_catus
ENSFALG00000003211	RPUSD1	100	65.347	ENSFDAG00000013398	RPUSD1	99	65.347	Fukomys_damarensis
ENSFALG00000003211	RPUSD1	99	63.907	ENSFHEG00000004736	rpusd1	98	63.934	Fundulus_heteroclitus
ENSFALG00000003211	RPUSD1	99	60.984	ENSGMOG00000010756	rpusd1	99	62.295	Gadus_morhua
ENSFALG00000003211	RPUSD1	100	84.158	ENSGALG00000005315	RPUSD1	100	84.158	Gallus_gallus
ENSFALG00000003211	RPUSD1	99	64.548	ENSGAFG00000009886	rpusd1	98	64.548	Gambusia_affinis
ENSFALG00000003211	RPUSD1	98	63.036	ENSGACG00000014276	rpusd1	98	64.901	Gasterosteus_aculeatus
ENSFALG00000003211	RPUSD1	99	81.788	ENSGAGG00000004181	RPUSD1	99	81.788	Gopherus_agassizii
ENSFALG00000003211	RPUSD1	100	63.987	ENSGGOG00000013997	RPUSD1	89	76.724	Gorilla_gorilla
ENSFALG00000003211	RPUSD1	99	61.981	ENSHBUG00000023728	rpusd1	98	63.072	Haplochromis_burtoni
ENSFALG00000003211	RPUSD1	100	66.230	ENSHGLG00000002595	RPUSD1	99	66.230	Heterocephalus_glaber_female
ENSFALG00000003211	RPUSD1	100	66.230	ENSHGLG00100014303	RPUSD1	99	66.230	Heterocephalus_glaber_male
ENSFALG00000003211	RPUSD1	99	63.455	ENSHCOG00000002390	rpusd1	99	63.455	Hippocampus_comes
ENSFALG00000003211	RPUSD1	99	64.784	ENSIPUG00000001570	rpusd1	99	65.116	Ictalurus_punctatus
ENSFALG00000003211	RPUSD1	100	67.541	ENSSTOG00000004276	RPUSD1	99	67.541	Ictidomys_tridecemlineatus
ENSFALG00000003211	RPUSD1	100	66.007	ENSJJAG00000015696	Rpusd1	99	66.230	Jaculus_jaculus
ENSFALG00000003211	RPUSD1	99	64.214	ENSKMAG00000017287	rpusd1	98	64.214	Kryptolebias_marmoratus
ENSFALG00000003211	RPUSD1	99	63.158	ENSLBEG00000013354	RPUSD1	98	64.145	Labrus_bergylta
ENSFALG00000003211	RPUSD1	99	63.158	ENSLBEG00000022502	rpusd1	98	64.145	Labrus_bergylta
ENSFALG00000003211	RPUSD1	99	73.000	ENSLACG00000008869	RPUSD1	99	73.000	Latimeria_chalumnae
ENSFALG00000003211	RPUSD1	71	80.841	ENSLOCG00000005682	rpusd1	99	80.841	Lepisosteus_oculatus
ENSFALG00000003211	RPUSD1	100	64.590	ENSLAFG00000002115	RPUSD1	99	64.590	Loxodonta_africana
ENSFALG00000003211	RPUSD1	100	64.194	ENSMFAG00000003961	RPUSD1	89	78.448	Macaca_fascicularis
ENSFALG00000003211	RPUSD1	100	64.194	ENSMMUG00000000842	RPUSD1	89	78.448	Macaca_mulatta
ENSFALG00000003211	RPUSD1	100	64.194	ENSMNEG00000042712	RPUSD1	89	78.448	Macaca_nemestrina
ENSFALG00000003211	RPUSD1	100	64.194	ENSMLEG00000030591	RPUSD1	89	78.448	Mandrillus_leucophaeus
ENSFALG00000003211	RPUSD1	99	63.934	ENSMAMG00000004735	rpusd1	98	65.246	Mastacembelus_armatus
ENSFALG00000003211	RPUSD1	99	62.300	ENSMZEG00005003214	rpusd1	98	63.399	Maylandia_zebra
ENSFALG00000003211	RPUSD1	98	82.886	ENSMGAG00000005447	RPUSD1	99	82.886	Meleagris_gallopavo
ENSFALG00000003211	RPUSD1	84	67.843	ENSMAUG00000019998	Rpusd1	97	67.843	Mesocricetus_auratus
ENSFALG00000003211	RPUSD1	100	64.803	ENSMICG00000017561	RPUSD1	92	77.500	Microcebus_murinus
ENSFALG00000003211	RPUSD1	100	67.987	ENSMOCG00000014082	Rpusd1	99	68.647	Microtus_ochrogaster
ENSFALG00000003211	RPUSD1	99	60.586	ENSMMOG00000012569	rpusd1	99	62.416	Mola_mola
ENSFALG00000003211	RPUSD1	100	75.329	ENSMODG00000016882	RPUSD1	99	75.329	Monodelphis_domestica
ENSFALG00000003211	RPUSD1	99	62.951	ENSMALG00000017818	rpusd1	98	64.262	Monopterus_albus
ENSFALG00000003211	RPUSD1	100	67.657	MGP_CAROLIEiJ_G0021244	Rpusd1	99	68.317	Mus_caroli
ENSFALG00000003211	RPUSD1	100	67.327	ENSMUSG00000041199	Rpusd1	99	67.987	Mus_musculus
ENSFALG00000003211	RPUSD1	100	66.230	MGP_PahariEiJ_G0023562	Rpusd1	99	66.775	Mus_pahari
ENSFALG00000003211	RPUSD1	100	67.327	MGP_SPRETEiJ_G0022155	Rpusd1	99	67.987	Mus_spretus
ENSFALG00000003211	RPUSD1	100	64.570	ENSMPUG00000015897	RPUSD1	99	64.901	Mustela_putorius_furo
ENSFALG00000003211	RPUSD1	100	66.558	ENSMLUG00000001089	RPUSD1	99	66.558	Myotis_lucifugus
ENSFALG00000003211	RPUSD1	100	66.337	ENSNGAG00000003595	Rpusd1	99	66.667	Nannospalax_galili
ENSFALG00000003211	RPUSD1	99	65.101	ENSNBRG00000006457	rpusd1	98	65.436	Neolamprologus_brichardi
ENSFALG00000003211	RPUSD1	54	53.714	ENSNLEG00000008424	-	98	54.286	Nomascus_leucogenys
ENSFALG00000003211	RPUSD1	100	76.000	ENSMEUG00000016049	RPUSD1	99	76.000	Notamacropus_eugenii
ENSFALG00000003211	RPUSD1	100	60.265	ENSOPRG00000008340	RPUSD1	99	60.265	Ochotona_princeps
ENSFALG00000003211	RPUSD1	100	66.007	ENSODEG00000016945	RPUSD1	99	66.007	Octodon_degus
ENSFALG00000003211	RPUSD1	99	62.179	ENSONIG00000015672	rpusd1	99	64.262	Oreochromis_niloticus
ENSFALG00000003211	RPUSD1	99	64.000	ENSORLG00000013009	rpusd1	99	64.000	Oryzias_latipes
ENSFALG00000003211	RPUSD1	99	63.667	ENSORLG00020010382	rpusd1	99	63.667	Oryzias_latipes_hni
ENSFALG00000003211	RPUSD1	99	63.333	ENSORLG00015021354	rpusd1	99	63.333	Oryzias_latipes_hsok
ENSFALG00000003211	RPUSD1	99	65.436	ENSOMEG00000021426	rpusd1	98	65.436	Oryzias_melastigma
ENSFALG00000003211	RPUSD1	100	65.696	ENSOGAG00000003795	RPUSD1	99	65.696	Otolemur_garnettii
ENSFALG00000003211	RPUSD1	100	67.869	ENSOARG00000014254	RPUSD1	99	67.869	Ovis_aries
ENSFALG00000003211	RPUSD1	100	63.344	ENSPPAG00000034797	RPUSD1	89	76.724	Pan_paniscus
ENSFALG00000003211	RPUSD1	100	66.667	ENSPPRG00000012389	RPUSD1	91	75.833	Panthera_pardus
ENSFALG00000003211	RPUSD1	100	66.225	ENSPTIG00000008545	RPUSD1	91	75.833	Panthera_tigris_altaica
ENSFALG00000003211	RPUSD1	100	63.344	ENSPTRG00000007565	RPUSD1	89	76.724	Pan_troglodytes
ENSFALG00000003211	RPUSD1	100	63.871	ENSPANG00000024401	RPUSD1	89	78.448	Papio_anubis
ENSFALG00000003211	RPUSD1	100	68.543	ENSPKIG00000018890	rpusd1	91	68.543	Paramormyrops_kingsleyae
ENSFALG00000003211	RPUSD1	100	83.168	ENSPSIG00000013945	RPUSD1	100	83.168	Pelodiscus_sinensis
ENSFALG00000003211	RPUSD1	99	62.500	ENSPMGG00000014950	rpusd1	99	62.500	Periophthalmus_magnuspinnatus
ENSFALG00000003211	RPUSD1	100	67.869	ENSPEMG00000000497	Rpusd1	99	67.987	Peromyscus_maniculatus_bairdii
ENSFALG00000003211	RPUSD1	99	51.757	ENSPMAG00000001563	rpusd1	99	53.311	Petromyzon_marinus
ENSFALG00000003211	RPUSD1	100	77.000	ENSPCIG00000021216	-	93	77.000	Phascolarctos_cinereus
ENSFALG00000003211	RPUSD1	99	66.107	ENSPFOG00000007946	rpusd1	98	66.107	Poecilia_formosa
ENSFALG00000003211	RPUSD1	99	66.107	ENSPLAG00000011925	rpusd1	98	66.107	Poecilia_latipinna
ENSFALG00000003211	RPUSD1	99	65.772	ENSPMEG00000002910	rpusd1	98	65.772	Poecilia_mexicana
ENSFALG00000003211	RPUSD1	99	65.886	ENSPREG00000019851	rpusd1	98	65.886	Poecilia_reticulata
ENSFALG00000003211	RPUSD1	100	52.131	ENSPCAG00000002258	RPUSD1	99	52.131	Procavia_capensis
ENSFALG00000003211	RPUSD1	100	64.078	ENSPCOG00000022582	RPUSD1	92	78.333	Propithecus_coquereli
ENSFALG00000003211	RPUSD1	100	62.460	ENSPVAG00000013104	RPUSD1	99	63.107	Pteropus_vampyrus
ENSFALG00000003211	RPUSD1	99	61.981	ENSPNYG00000024076	rpusd1	98	63.072	Pundamilia_nyererei
ENSFALG00000003211	RPUSD1	100	62.333	ENSPNAG00000013806	rpusd1	100	62.333	Pygocentrus_nattereri
ENSFALG00000003211	RPUSD1	100	67.327	ENSRNOG00000023639	Rpusd1	99	67.987	Rattus_norvegicus
ENSFALG00000003211	RPUSD1	100	64.516	ENSRBIG00000030238	RPUSD1	89	78.448	Rhinopithecus_bieti
ENSFALG00000003211	RPUSD1	100	64.516	ENSRROG00000036663	RPUSD1	89	78.448	Rhinopithecus_roxellana
ENSFALG00000003211	RPUSD1	100	65.677	ENSSBOG00000033063	RPUSD1	99	66.337	Saimiri_boliviensis_boliviensis
ENSFALG00000003211	RPUSD1	100	76.333	ENSSHAG00000013500	RPUSD1	99	76.333	Sarcophilus_harrisii
ENSFALG00000003211	RPUSD1	99	69.565	ENSSFOG00015014394	rpusd1	99	69.565	Scleropages_formosus
ENSFALG00000003211	RPUSD1	99	63.158	ENSSMAG00000008045	rpusd1	91	63.816	Scophthalmus_maximus
ENSFALG00000003211	RPUSD1	85	69.685	ENSSDUG00000001829	rpusd1	95	64.474	Seriola_dumerili
ENSFALG00000003211	RPUSD1	85	69.685	ENSSLDG00000020853	rpusd1	95	64.474	Seriola_lalandi_dorsalis
ENSFALG00000003211	RPUSD1	55	78.443	ENSSARG00000011187	-	100	78.443	Sorex_araneus
ENSFALG00000003211	RPUSD1	63	72.396	ENSSPUG00000005119	-	100	72.396	Sphenodon_punctatus
ENSFALG00000003211	RPUSD1	99	63.816	ENSSPAG00000012708	rpusd1	98	64.803	Stegastes_partitus
ENSFALG00000003211	RPUSD1	100	65.696	ENSSSCG00000008000	RPUSD1	98	73.228	Sus_scrofa
ENSFALG00000003211	RPUSD1	84	96.047	ENSTGUG00000015375	RPUSD1	100	96.047	Taeniopygia_guttata
ENSFALG00000003211	RPUSD1	99	62.171	ENSTRUG00000003041	rpusd1	98	63.816	Takifugu_rubripes
ENSFALG00000003211	RPUSD1	99	60.943	ENSTNIG00000002660	rpusd1	99	60.943	Tetraodon_nigroviridis
ENSFALG00000003211	RPUSD1	100	65.696	ENSTTRG00000010167	RPUSD1	99	66.667	Tursiops_truncatus
ENSFALG00000003211	RPUSD1	100	66.887	ENSUAMG00000012736	RPUSD1	99	66.887	Ursus_americanus
ENSFALG00000003211	RPUSD1	100	66.887	ENSUMAG00000021174	RPUSD1	99	67.550	Ursus_maritimus
ENSFALG00000003211	RPUSD1	100	67.219	ENSVVUG00000012357	RPUSD1	99	67.219	Vulpes_vulpes
ENSFALG00000003211	RPUSD1	100	70.667	ENSXETG00000007184	rpusd1	99	70.667	Xenopus_tropicalis
ENSFALG00000003211	RPUSD1	99	64.883	ENSXCOG00000017930	rpusd1	98	64.883	Xiphophorus_couchianus
ENSFALG00000003211	RPUSD1	99	64.883	ENSXMAG00000024084	rpusd1	98	64.883	Xiphophorus_maculatus