EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003411	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003425	-	1553	-	ENSFALP00000003411	211 (aa)	-	U3JKV7

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000003276	-	82	33.696	ENSFALG00000010052	RAB11A	88	33.696
ENSFALG00000003276	-	83	32.609	ENSFALG00000007652	RAB35	86	32.065
ENSFALG00000003276	-	98	32.579	ENSFALG00000004886	RAB33B	86	32.512
ENSFALG00000003276	-	91	35.678	ENSFALG00000008011	RAB6A	96	35.678
ENSFALG00000003276	-	87	30.769	ENSFALG00000009213	NKIRAS1	95	30.769
ENSFALG00000003276	-	79	30.539	ENSFALG00000009239	RAB5A	78	30.539
ENSFALG00000003276	-	75	33.540	ENSFALG00000000201	RAB39B	76	33.540
ENSFALG00000003276	-	85	32.787	ENSFALG00000011828	-	84	32.787
ENSFALG00000003276	-	84	33.146	ENSFALG00000012783	RAB17	83	33.146
ENSFALG00000003276	-	75	34.969	ENSFALG00000001373	-	74	34.810
ENSFALG00000003276	-	83	33.880	ENSFALG00000007930	RAB7A	87	33.880
ENSFALG00000003276	-	93	32.683	ENSFALG00000013624	RAB1A	99	32.683
ENSFALG00000003276	-	74	39.375	ENSFALG00000007160	RAB18	77	39.375
ENSFALG00000003276	-	73	34.839	ENSFALG00000007765	RAB30	76	34.839
ENSFALG00000003276	-	86	30.769	ENSFALG00000003709	RAB19	84	30.769
ENSFALG00000003276	-	86	32.796	ENSFALG00000005613	RAB2A	88	32.796
ENSFALG00000003276	-	80	37.647	ENSFALG00000002594	-	65	37.255
ENSFALG00000003276	-	74	35.032	ENSFALG00000002597	RAB25	62	35.032
ENSFALG00000003276	-	89	37.931	ENSFALG00000001205	RAB15	96	37.931
ENSFALG00000003276	-	73	33.962	ENSFALG00000011581	RAB33A	91	31.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003276	-	87	62.434	ENSACAG00000016658	-	99	61.702	Anolis_carolinensis
ENSFALG00000003276	-	65	55.782	ENSETEG00000008991	-	95	55.782	Echinops_telfairi
ENSFALG00000003276	-	90	52.105	ENSGMOG00000018741	-	90	52.105	Gadus_morhua
ENSFALG00000003276	-	90	50.526	ENSGACG00000019767	-	96	50.526	Gasterosteus_aculeatus
ENSFALG00000003276	-	73	63.871	ENSLAFG00000000202	-	89	63.871	Loxodonta_africana
ENSFALG00000003276	-	99	73.246	ENSMGAG00000002516	-	96	74.537	Meleagris_gallopavo
ENSFALG00000003276	-	99	57.547	ENSMUSG00000064147	Rab44	70	60.428	Mus_musculus
ENSFALG00000003276	-	100	57.075	ENSMPUG00000014188	-	80	58.883	Mustela_putorius_furo
ENSFALG00000003276	-	72	59.603	ENSMLUG00000010706	-	83	59.603	Myotis_lucifugus
ENSFALG00000003276	-	67	62.000	ENSMEUG00000004712	-	100	62.000	Notamacropus_eugenii
ENSFALG00000003276	-	52	54.237	ENSOPRG00000006034	-	99	54.237	Ochotona_princeps
ENSFALG00000003276	-	77	53.704	ENSONIG00000011542	-	100	53.704	Oreochromis_niloticus
ENSFALG00000003276	-	72	78.947	ENSPSIG00000002522	-	98	78.947	Pelodiscus_sinensis
ENSFALG00000003276	-	67	60.000	ENSPVAG00000014624	-	98	60.000	Pteropus_vampyrus
ENSFALG00000003276	-	100	90.521	ENSTGUG00000017468	-	95	92.000	Taeniopygia_guttata
ENSFALG00000003276	-	78	51.829	ENSTNIG00000001448	-	98	51.829	Tetraodon_nigroviridis
ENSFALG00000003276	-	76	58.750	ENSTNIG00000008784	-	99	58.750	Tetraodon_nigroviridis