EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003319 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 2914 bases
Position: chrJH603325.1:1509540-1512453
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003472	RRM_1	PF00076.22	6.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003486	PABPN1L-201	714	-	ENSFALP00000003472	237 (aa)	-	U3JL18

Gene Model

Click here to download ENSFALG00000003319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003319	PABPN1L	80	55.721	ENSG00000205022	PABPN1L	72	55.721	Homo_sapiens
ENSFALG00000003319	PABPN1L	63	57.595	ENSAPOG00000000685	PABPN1L	51	57.595	Acanthochromis_polyacanthus
ENSFALG00000003319	PABPN1L	63	58.000	ENSACIG00000021400	PABPN1L	79	61.538	Amphilophus_citrinellus
ENSFALG00000003319	PABPN1L	60	57.047	ENSAOCG00000019844	PABPN1L	59	60.000	Amphiprion_ocellaris
ENSFALG00000003319	PABPN1L	60	57.047	ENSAPEG00000019534	PABPN1L	59	60.000	Amphiprion_percula
ENSFALG00000003319	PABPN1L	63	56.410	ENSATEG00000011646	PABPN1L	62	58.974	Anabas_testudineus
ENSFALG00000003319	PABPN1L	50	88.136	ENSAPLG00000009174	PABPN1L	100	88.136	Anas_platyrhynchos
ENSFALG00000003319	PABPN1L	77	72.581	ENSACAG00000013250	PABPN1L	98	72.581	Anolis_carolinensis
ENSFALG00000003319	PABPN1L	80	53.769	ENSANAG00000038178	PABPN1L	71	54.082	Aotus_nancymaae
ENSFALG00000003319	PABPN1L	65	58.491	ENSACLG00000025147	PABPN1L	61	61.635	Astatotilapia_calliptera
ENSFALG00000003319	PABPN1L	58	62.143	ENSAMXG00000010873	PABPN1L	69	55.135	Astyanax_mexicanus
ENSFALG00000003319	PABPN1L	59	69.065	ENSBTAG00000006727	-	85	71.429	Bos_taurus
ENSFALG00000003319	PABPN1L	80	53.093	ENSBTAG00000023752	-	72	54.872	Bos_taurus
ENSFALG00000003319	PABPN1L	82	54.808	ENSCJAG00000045284	PABPN1L	74	54.808	Callithrix_jacchus
ENSFALG00000003319	PABPN1L	80	50.962	ENSCHIG00000013987	PABPN1L	76	51.456	Capra_hircus
ENSFALG00000003319	PABPN1L	63	59.375	ENSCAPG00000007240	PABPN1L	60	60.625	Cavia_aperea
ENSFALG00000003319	PABPN1L	64	59.259	ENSCPOG00000025951	PABPN1L	71	55.838	Cavia_porcellus
ENSFALG00000003319	PABPN1L	80	55.224	ENSCCAG00000027631	PABPN1L	71	55.556	Cebus_capucinus
ENSFALG00000003319	PABPN1L	80	56.219	ENSCATG00000031060	PABPN1L	73	56.716	Cercocebus_atys
ENSFALG00000003319	PABPN1L	78	55.051	ENSCLAG00000000704	PABPN1L	72	57.286	Chinchilla_lanigera
ENSFALG00000003319	PABPN1L	80	53.456	ENSCSAG00000002881	PABPN1L	74	53.456	Chlorocebus_sabaeus
ENSFALG00000003319	PABPN1L	77	78.495	ENSCPBG00000023441	PABPN1L	60	78.495	Chrysemys_picta_bellii
ENSFALG00000003319	PABPN1L	82	54.106	ENSCANG00000039336	PABPN1L	56	64.744	Colobus_angolensis_palliatus
ENSFALG00000003319	PABPN1L	81	53.623	ENSCGRG00001013211	Pabpn1l	75	54.106	Cricetulus_griseus_chok1gshd
ENSFALG00000003319	PABPN1L	81	53.623	ENSCGRG00000015868	Pabpn1l	75	54.106	Cricetulus_griseus_crigri
ENSFALG00000003319	PABPN1L	62	60.667	ENSCSEG00000001142	pabpn1l	64	59.524	Cynoglossus_semilaevis
ENSFALG00000003319	PABPN1L	59	59.459	ENSCVAG00000015547	PABPN1L	60	61.250	Cyprinodon_variegatus
ENSFALG00000003319	PABPN1L	85	52.133	ENSDNOG00000034677	PABPN1L	75	52.778	Dasypus_novemcinctus
ENSFALG00000003319	PABPN1L	80	55.882	ENSEASG00005000777	PABPN1L	74	55.882	Equus_asinus_asinus
ENSFALG00000003319	PABPN1L	80	56.373	ENSECAG00000000378	PABPN1L	74	56.373	Equus_caballus
ENSFALG00000003319	PABPN1L	81	55.440	ENSEEUG00000004747	PABPN1L	81	55.440	Erinaceus_europaeus
ENSFALG00000003319	PABPN1L	60	64.828	ENSELUG00000018385	PABPN1L	59	64.901	Esox_lucius
ENSFALG00000003319	PABPN1L	78	54.592	ENSFCAG00000010465	PABPN1L	71	56.853	Felis_catus
ENSFALG00000003319	PABPN1L	80	52.683	ENSFDAG00000021067	PABPN1L	72	54.726	Fukomys_damarensis
ENSFALG00000003319	PABPN1L	61	57.616	ENSFHEG00000018295	PABPN1L	62	58.896	Fundulus_heteroclitus
ENSFALG00000003319	PABPN1L	59	55.629	ENSGMOG00000001475	PABPN1L	62	56.442	Gadus_morhua
ENSFALG00000003319	PABPN1L	73	80.114	ENSGALG00000006242	PABPN1L	100	80.114	Gallus_gallus
ENSFALG00000003319	PABPN1L	59	59.459	ENSGAFG00000012565	PABPN1L	60	61.250	Gambusia_affinis
ENSFALG00000003319	PABPN1L	59	55.263	ENSGACG00000015428	PABPN1L	60	57.233	Gasterosteus_aculeatus
ENSFALG00000003319	PABPN1L	72	78.613	ENSGAGG00000010613	PABPN1L	60	78.613	Gopherus_agassizii
ENSFALG00000003319	PABPN1L	80	55.721	ENSGGOG00000012670	PABPN1L	73	55.721	Gorilla_gorilla
ENSFALG00000003319	PABPN1L	65	58.750	ENSHBUG00000002388	PABPN1L	61	60.625	Haplochromis_burtoni
ENSFALG00000003319	PABPN1L	60	63.399	ENSHGLG00000014207	PABPN1L	61	62.821	Heterocephalus_glaber_female
ENSFALG00000003319	PABPN1L	60	63.399	ENSHGLG00100005230	PABPN1L	61	62.821	Heterocephalus_glaber_male
ENSFALG00000003319	PABPN1L	61	54.777	ENSHCOG00000004151	PABPN1L	67	56.522	Hippocampus_comes
ENSFALG00000003319	PABPN1L	78	55.838	ENSSTOG00000020814	PABPN1L	72	55.224	Ictidomys_tridecemlineatus
ENSFALG00000003319	PABPN1L	82	55.340	ENSJJAG00000006433	Pabpn1l	74	55.340	Jaculus_jaculus
ENSFALG00000003319	PABPN1L	51	60.833	ENSKMAG00000001112	PABPN1L	61	59.155	Kryptolebias_marmoratus
ENSFALG00000003319	PABPN1L	61	56.579	ENSLBEG00000011647	PABPN1L	67	57.143	Labrus_bergylta
ENSFALG00000003319	PABPN1L	96	51.240	ENSLAFG00000025902	-	77	57.868	Loxodonta_africana
ENSFALG00000003319	PABPN1L	80	56.219	ENSMFAG00000002924	PABPN1L	73	56.219	Macaca_fascicularis
ENSFALG00000003319	PABPN1L	80	57.000	ENSMMUG00000012438	PABPN1L	73	57.000	Macaca_mulatta
ENSFALG00000003319	PABPN1L	80	56.219	ENSMNEG00000044808	PABPN1L	73	56.219	Macaca_nemestrina
ENSFALG00000003319	PABPN1L	80	56.219	ENSMLEG00000032667	PABPN1L	73	56.219	Mandrillus_leucophaeus
ENSFALG00000003319	PABPN1L	65	58.491	ENSMZEG00005002186	PABPN1L	61	61.635	Maylandia_zebra
ENSFALG00000003319	PABPN1L	82	51.905	ENSMAUG00000014032	Pabpn1l	77	52.657	Mesocricetus_auratus
ENSFALG00000003319	PABPN1L	80	55.024	ENSMICG00000028179	PABPN1L	73	55.024	Microcebus_murinus
ENSFALG00000003319	PABPN1L	97	49.593	ENSMOCG00000007955	Pabpn1l	73	54.000	Microtus_ochrogaster
ENSFALG00000003319	PABPN1L	77	55.612	ENSMODG00000003873	-	73	55.612	Monodelphis_domestica
ENSFALG00000003319	PABPN1L	71	52.571	ENSMALG00000016926	PABPN1L	63	55.249	Monopterus_albus
ENSFALG00000003319	PABPN1L	90	46.341	MGP_CAROLIEiJ_G0031670	Pabpn1l	72	52.792	Mus_caroli
ENSFALG00000003319	PABPN1L	79	52.792	ENSMUSG00000069867	Pabpn1l	72	52.792	Mus_musculus
ENSFALG00000003319	PABPN1L	90	49.145	MGP_PahariEiJ_G0023268	Pabpn1l	72	53.731	Mus_pahari
ENSFALG00000003319	PABPN1L	79	52.792	MGP_SPRETEiJ_G0032788	Pabpn1l	72	52.792	Mus_spretus
ENSFALG00000003319	PABPN1L	77	44.500	ENSMLUG00000003228	PABPN1L	69	44.162	Myotis_lucifugus
ENSFALG00000003319	PABPN1L	98	49.603	ENSNGAG00000023992	Pabpn1l	72	56.784	Nannospalax_galili
ENSFALG00000003319	PABPN1L	53	63.780	ENSNBRG00000017078	PABPN1L	65	60.645	Neolamprologus_brichardi
ENSFALG00000003319	PABPN1L	79	57.071	ENSOPRG00000005597	PABPN1L	73	57.071	Ochotona_princeps
ENSFALG00000003319	PABPN1L	77	54.167	ENSODEG00000004649	PABPN1L	66	54.688	Octodon_degus
ENSFALG00000003319	PABPN1L	77	70.588	ENSOANG00000013901	PABPN1L	72	70.588	Ornithorhynchus_anatinus
ENSFALG00000003319	PABPN1L	65	61.538	ENSORLG00000026560	PABPN1L	60	61.538	Oryzias_latipes
ENSFALG00000003319	PABPN1L	65	61.538	ENSORLG00020015068	PABPN1L	60	61.538	Oryzias_latipes_hni
ENSFALG00000003319	PABPN1L	65	61.538	ENSORLG00015000397	PABPN1L	60	61.538	Oryzias_latipes_hsok
ENSFALG00000003319	PABPN1L	80	58.500	ENSOGAG00000000433	PABPN1L	73	58.500	Otolemur_garnettii
ENSFALG00000003319	PABPN1L	77	54.726	ENSOARG00000013682	PABPN1L	67	56.436	Ovis_aries
ENSFALG00000003319	PABPN1L	80	54.229	ENSPPAG00000028866	PABPN1L	72	54.726	Pan_paniscus
ENSFALG00000003319	PABPN1L	78	55.612	ENSPPRG00000015106	PABPN1L	71	57.868	Panthera_pardus
ENSFALG00000003319	PABPN1L	65	62.025	ENSPTIG00000015606	PABPN1L	61	62.025	Panthera_tigris_altaica
ENSFALG00000003319	PABPN1L	80	54.229	ENSPTRG00000031120	PABPN1L	72	54.726	Pan_troglodytes
ENSFALG00000003319	PABPN1L	80	56.219	ENSPANG00000026039	PABPN1L	73	56.436	Papio_anubis
ENSFALG00000003319	PABPN1L	77	73.158	ENSPSIG00000003404	PABPN1L	100	73.684	Pelodiscus_sinensis
ENSFALG00000003319	PABPN1L	51	62.295	ENSPMGG00000013927	PABPN1L	59	71.287	Periophthalmus_magnuspinnatus
ENSFALG00000003319	PABPN1L	80	55.665	ENSPEMG00000016624	Pabpn1l	75	55.665	Peromyscus_maniculatus_bairdii
ENSFALG00000003319	PABPN1L	60	63.636	ENSPCIG00000007038	-	99	63.636	Phascolarctos_cinereus
ENSFALG00000003319	PABPN1L	59	59.459	ENSPFOG00000007001	PABPN1L	80	47.222	Poecilia_formosa
ENSFALG00000003319	PABPN1L	59	59.459	ENSPLAG00000018431	PABPN1L	60	61.250	Poecilia_latipinna
ENSFALG00000003319	PABPN1L	59	59.459	ENSPMEG00000009108	PABPN1L	60	61.250	Poecilia_mexicana
ENSFALG00000003319	PABPN1L	80	55.721	ENSPPYG00000007655	PABPN1L	72	55.721	Pongo_abelii
ENSFALG00000003319	PABPN1L	80	57.143	ENSPCOG00000024077	PABPN1L	73	57.143	Propithecus_coquereli
ENSFALG00000003319	PABPN1L	80	56.931	ENSPVAG00000002716	PABPN1L	72	56.931	Pteropus_vampyrus
ENSFALG00000003319	PABPN1L	65	58.491	ENSPNYG00000004803	PABPN1L	61	61.635	Pundamilia_nyererei
ENSFALG00000003319	PABPN1L	79	54.545	ENSRNOG00000029558	Pabpn1l	73	54.545	Rattus_norvegicus
ENSFALG00000003319	PABPN1L	80	55.721	ENSRBIG00000030740	PABPN1L	73	55.941	Rhinopithecus_bieti
ENSFALG00000003319	PABPN1L	80	56.219	ENSRROG00000032240	-	73	56.436	Rhinopithecus_roxellana
ENSFALG00000003319	PABPN1L	80	56.500	ENSRROG00000035483	-	72	56.500	Rhinopithecus_roxellana
ENSFALG00000003319	PABPN1L	80	54.774	ENSSBOG00000018410	PABPN1L	71	55.102	Saimiri_boliviensis_boliviensis
ENSFALG00000003319	PABPN1L	77	55.172	ENSSHAG00000010001	-	71	55.172	Sarcophilus_harrisii
ENSFALG00000003319	PABPN1L	61	57.333	ENSSMAG00000021348	PABPN1L	64	55.738	Scophthalmus_maximus
ENSFALG00000003319	PABPN1L	60	54.902	ENSSDUG00000006986	PABPN1L	61	59.627	Seriola_dumerili
ENSFALG00000003319	PABPN1L	61	54.487	ENSSLDG00000021845	PABPN1L	62	59.146	Seriola_lalandi_dorsalis
ENSFALG00000003319	PABPN1L	70	50.303	ENSSARG00000005178	-	71	50.303	Sorex_araneus
ENSFALG00000003319	PABPN1L	77	75.410	ENSSPUG00000007031	PABPN1L	84	75.543	Sphenodon_punctatus
ENSFALG00000003319	PABPN1L	66	55.952	ENSSPAG00000017978	PABPN1L	62	59.146	Stegastes_partitus
ENSFALG00000003319	PABPN1L	77	57.513	ENSSSCG00000036367	PABPN1L	74	58.621	Sus_scrofa
ENSFALG00000003319	PABPN1L	62	55.769	ENSTRUG00000024725	PABPN1L	78	55.026	Takifugu_rubripes
ENSFALG00000003319	PABPN1L	80	55.446	ENSTTRG00000004691	PABPN1L	73	58.416	Tursiops_truncatus
ENSFALG00000003319	PABPN1L	62	60.123	ENSXETG00000011258	pabpn1l	97	55.708	Xenopus_tropicalis