EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003320 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 12023 bases
Position: chrJH603293.1:1865951-1877973
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003468	Nucleoplasmin	PF03066.15	1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003482	-	967	-	ENSFALP00000003468	294 (aa)	-	U3JL14

Gene Model

Click here to download ENSFALG00000003320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003320	-	94	45.455	ENSAPOG00000004268	npm1b	94	43.706	Acanthochromis_polyacanthus
ENSFALG00000003320	-	94	45.804	ENSAOCG00000012549	npm1b	94	44.755	Amphiprion_ocellaris
ENSFALG00000003320	-	94	46.809	ENSAPEG00000000868	npm1b	94	44.681	Amphiprion_percula
ENSFALG00000003320	-	94	41.667	ENSATEG00000006254	npm1b	94	44.710	Anabas_testudineus
ENSFALG00000003320	-	94	71.930	ENSACAG00000015626	-	95	71.930	Anolis_carolinensis
ENSFALG00000003320	-	94	44.056	ENSAMXG00000042148	npm1b	95	44.599	Astyanax_mexicanus
ENSFALG00000003320	-	82	46.586	ENSCAFG00000023359	-	93	45.902	Canis_familiaris
ENSFALG00000003320	-	96	74.386	ENSCPBG00000021221	-	57	75.445	Chrysemys_picta_bellii
ENSFALG00000003320	-	94	46.341	ENSCSEG00000004530	npm1b	94	46.341	Cynoglossus_semilaevis
ENSFALG00000003320	-	94	42.361	ENSCVAG00000013016	npm1b	94	41.958	Cyprinodon_variegatus
ENSFALG00000003320	-	94	45.645	ENSDARG00000037675	npm1b	95	46.154	Danio_rerio
ENSFALG00000003320	-	94	41.096	ENSELUG00000022123	npm1b	94	40.068	Esox_lucius
ENSFALG00000003320	-	94	43.448	ENSFHEG00000020794	npm1b	94	42.361	Fundulus_heteroclitus
ENSFALG00000003320	-	94	44.251	ENSGMOG00000002689	npm1b	95	42.756	Gadus_morhua
ENSFALG00000003320	-	94	91.667	ENSGALG00000002197	-	68	91.667	Gallus_gallus
ENSFALG00000003320	-	94	41.781	ENSGAFG00000017709	npm1b	94	44.027	Gambusia_affinis
ENSFALG00000003320	-	94	44.681	ENSGACG00000016706	npm1b	95	46.021	Gasterosteus_aculeatus
ENSFALG00000003320	-	94	73.310	ENSGAGG00000020250	-	94	72.954	Gopherus_agassizii
ENSFALG00000003320	-	94	43.750	ENSHBUG00000019903	npm1b	89	46.021	Haplochromis_burtoni
ENSFALG00000003320	-	94	44.014	ENSHCOG00000003895	npm1b	94	44.014	Hippocampus_comes
ENSFALG00000003320	-	94	45.704	ENSIPUG00000020165	npm1b	95	45.704	Ictalurus_punctatus
ENSFALG00000003320	-	94	45.105	ENSKMAG00000008260	npm1b	95	45.105	Kryptolebias_marmoratus
ENSFALG00000003320	-	89	42.254	ENSLACG00000001779	-	99	41.696	Latimeria_chalumnae
ENSFALG00000003320	-	94	48.736	ENSLACG00000013460	-	94	49.640	Latimeria_chalumnae
ENSFALG00000003320	-	93	37.584	ENSLOCG00000001942	npm1b	99	37.584	Lepisosteus_oculatus
ENSFALG00000003320	-	70	43.182	ENSMAMG00000015335	npm1b	97	43.182	Mastacembelus_armatus
ENSFALG00000003320	-	93	91.941	ENSMGAG00000001591	-	100	91.941	Meleagris_gallopavo
ENSFALG00000003320	-	80	41.803	ENSMALG00000015383	npm1b	98	43.852	Monopterus_albus
ENSFALG00000003320	-	94	40.909	ENSONIG00000001397	npm1b	93	42.466	Oreochromis_niloticus
ENSFALG00000003320	-	93	39.209	ENSOMEG00000003414	npm1b	93	39.925	Oryzias_melastigma
ENSFALG00000003320	-	94	44.369	ENSPKIG00000020050	npm1b	94	44.710	Paramormyrops_kingsleyae
ENSFALG00000003320	-	95	75.618	ENSPSIG00000011204	-	91	76.325	Pelodiscus_sinensis
ENSFALG00000003320	-	93	40.714	ENSPMAG00000004930	npm1b	99	41.007	Petromyzon_marinus
ENSFALG00000003320	-	94	43.007	ENSPFOG00000018357	npm1b	94	42.657	Poecilia_formosa
ENSFALG00000003320	-	94	45.455	ENSPNAG00000005498	npm1b	95	45.455	Pygocentrus_nattereri
ENSFALG00000003320	-	94	43.060	ENSSFOG00015005064	npm1b	95	43.060	Scleropages_formosus
ENSFALG00000003320	-	94	44.366	ENSSMAG00000008088	npm1b	94	44.366	Scophthalmus_maximus
ENSFALG00000003320	-	94	46.875	ENSSDUG00000007726	npm1b	94	45.833	Seriola_dumerili
ENSFALG00000003320	-	94	47.222	ENSSLDG00000021396	npm1b	94	46.181	Seriola_lalandi_dorsalis
ENSFALG00000003320	-	94	44.406	ENSSPAG00000011152	npm1b	94	45.296	Stegastes_partitus
ENSFALG00000003320	-	93	93.841	ENSTGUG00000014970	-	100	92.029	Taeniopygia_guttata
ENSFALG00000003320	-	94	46.429	ENSTRUG00000008105	npm1b	89	45.965	Takifugu_rubripes
ENSFALG00000003320	-	94	42.807	ENSTNIG00000013057	npm1b	94	41.463	Tetraodon_nigroviridis
ENSFALG00000003320	-	95	60.839	ENSXETG00000008403	npm1	94	61.888	Xenopus_tropicalis
ENSFALG00000003320	-	94	40.210	ENSXMAG00000001986	npm1b	94	43.299	Xiphophorus_maculatus