EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSFALG00000003407 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Plus strand
Length
16778 bases
Position
chrJH603249.1:2843359-2860136
Accession
101813264
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000003548CSDPF00313.228.2e-8415
ENSFALP00000003548CSDPF00313.228.2e-8425
ENSFALP00000003548CSDPF00313.228.2e-8435
ENSFALP00000003548CSDPF00313.228.2e-8445
ENSFALP00000003548CSDPF00313.228.2e-8455
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000003562CSDE1-2013104-ENSFALP00000003548796 (aa)XP_005059464U3JL94
Gene Model
Click here to download ENSFALG00000003407's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003407's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000003407CSDE110091.980ENSG00000009307CSDE1100100.000Homo_sapiens
ENSFALG00000003407CSDE110077.045ENSAPOG00000015538csde110076.671Acanthochromis_polyacanthus
ENSFALG00000003407CSDE110087.218ENSAMEG00000017129CSDE19487.218Ailuropoda_melanoleuca
ENSFALG00000003407CSDE18780.000ENSACIG00000015175csde110080.000Amphilophus_citrinellus
ENSFALG00000003407CSDE110077.045ENSAOCG00000011510csde110076.250Amphiprion_ocellaris
ENSFALG00000003407CSDE110078.875ENSAPEG00000007194csde110077.045Amphiprion_percula
ENSFALG00000003407CSDE110075.780ENSATEG00000003864csde110075.780Anabas_testudineus
ENSFALG00000003407CSDE110094.724ENSAPLG00000008797CSDE110094.724Anas_platyrhynchos
ENSFALG00000003407CSDE110095.854ENSACAG00000003120CSDE110095.854Anolis_carolinensis
ENSFALG00000003407CSDE110091.980ENSANAG00000024665CSDE19591.980Aotus_nancymaae
ENSFALG00000003407CSDE17872.109ENSANAG00000028396-9172.109Aotus_nancymaae
ENSFALG00000003407CSDE110078.500ENSACLG00000013296csde110078.500Astatotilapia_calliptera
ENSFALG00000003407CSDE110074.813ENSAMXG00000007436csde110074.813Astyanax_mexicanus
ENSFALG00000003407CSDE110091.479ENSBTAG00000000678CSDE110087.594Bos_taurus
ENSFALG00000003407CSDE110092.105ENSCJAG00000012565CSDE19592.105Callithrix_jacchus
ENSFALG00000003407CSDE19887.852ENSCAFG00000009618CSDE19487.852Canis_familiaris
ENSFALG00000003407CSDE110087.970ENSCAFG00020000481CSDE110087.970Canis_lupus_dingo
ENSFALG00000003407CSDE110091.604ENSCHIG00000017250CSDE110087.719Capra_hircus
ENSFALG00000003407CSDE110092.231ENSTSYG00000003747CSDE110092.231Carlito_syrichta
ENSFALG00000003407CSDE110095.706ENSCAPG00000015128CSDE110095.706Cavia_aperea
ENSFALG00000003407CSDE110087.218ENSCPOG00000040388CSDE110087.218Cavia_porcellus
ENSFALG00000003407CSDE110092.105ENSCCAG00000036794CSDE110092.105Cebus_capucinus
ENSFALG00000003407CSDE19565.842ENSCCAG00000033677-9965.796Cebus_capucinus
ENSFALG00000003407CSDE19765.256ENSCCAG00000030878-9165.256Cebus_capucinus
ENSFALG00000003407CSDE110091.980ENSCATG00000036962CSDE19591.980Cercocebus_atys
ENSFALG00000003407CSDE110092.356ENSCLAG00000006618CSDE110092.356Chinchilla_lanigera
ENSFALG00000003407CSDE110091.980ENSCSAG00000001658CSDE19591.980Chlorocebus_sabaeus
ENSFALG00000003407CSDE110096.117ENSCHOG00000000918CSDE18596.117Choloepus_hoffmanni
ENSFALG00000003407CSDE110095.477ENSCPBG00000016547CSDE110095.477Chrysemys_picta_bellii
ENSFALG00000003407CSDE19742.962ENSCING00000014465-9842.962Ciona_intestinalis
ENSFALG00000003407CSDE19642.164ENSCSAVG00000008100-9842.164Ciona_savignyi
ENSFALG00000003407CSDE19093.208ENSCANG00000031069-9393.208Colobus_angolensis_palliatus
ENSFALG00000003407CSDE110091.980ENSCANG00000035096CSDE19591.980Colobus_angolensis_palliatus
ENSFALG00000003407CSDE110091.604ENSCGRG00001016833-10091.604Cricetulus_griseus_chok1gshd
ENSFALG00000003407CSDE110072.932ENSCGRG00001014011-10072.932Cricetulus_griseus_chok1gshd
ENSFALG00000003407CSDE110073.946ENSCGRG00000005831-10073.946Cricetulus_griseus_crigri
ENSFALG00000003407CSDE19787.305ENSCGRG00000002225-10087.305Cricetulus_griseus_crigri
ENSFALG00000003407CSDE110075.577ENSCSEG00000002620csde110075.125Cynoglossus_semilaevis
ENSFALG00000003407CSDE110079.000ENSCVAG00000001344csde110078.607Cyprinodon_variegatus
ENSFALG00000003407CSDE110079.401ENSDARG00000074758csde110079.401Danio_rerio
ENSFALG00000003407CSDE110088.235ENSDNOG00000010287-9388.235Dasypus_novemcinctus
ENSFALG00000003407CSDE110091.479ENSDORG00000011609Csde110091.479Dipodomys_ordii
ENSFALG00000003407CSDE19549.170FBgn0263352Unr7548.394Drosophila_melanogaster
ENSFALG00000003407CSDE19995.041ENSETEG00000002491-7495.041Echinops_telfairi
ENSFALG00000003407CSDE19078.281ENSETEG00000006280-10078.281Echinops_telfairi
ENSFALG00000003407CSDE17663.742ENSETEG00000007109-9963.742Echinops_telfairi
ENSFALG00000003407CSDE19969.472ENSETEG00000013678-9969.472Echinops_telfairi
ENSFALG00000003407CSDE19955.651ENSEBUG00000008647csde19953.929Eptatretus_burgeri
ENSFALG00000003407CSDE110092.105ENSEASG00005006284CSDE110092.105Equus_asinus_asinus
ENSFALG00000003407CSDE110092.105ENSECAG00000020885CSDE110092.105Equus_caballus
ENSFALG00000003407CSDE19292.670ENSEEUG00000006286CSDE16892.670Erinaceus_europaeus
ENSFALG00000003407CSDE110075.000ENSELUG00000015507csde110073.756Esox_lucius
ENSFALG00000003407CSDE110091.980ENSFCAG00000029266CSDE110088.095Felis_catus
ENSFALG00000003407CSDE110091.855ENSFDAG00000007882CSDE110091.855Fukomys_damarensis
ENSFALG00000003407CSDE110078.901ENSFHEG00000010799csde110078.901Fundulus_heteroclitus
ENSFALG00000003407CSDE19977.847ENSGMOG00000012731csde110077.847Gadus_morhua
ENSFALG00000003407CSDE19898.592ENSGALG00000002139CSDE19898.592Gallus_gallus
ENSFALG00000003407CSDE19375.837ENSGAFG00000005241csde19575.837Gambusia_affinis
ENSFALG00000003407CSDE19979.375ENSGACG00000004544csde110079.375Gasterosteus_aculeatus
ENSFALG00000003407CSDE110095.352ENSGAGG00000017685CSDE110095.352Gopherus_agassizii
ENSFALG00000003407CSDE110091.980ENSGGOG00000002164CSDE110088.095Gorilla_gorilla
ENSFALG00000003407CSDE110077.861ENSHBUG00000020315csde110075.875Haplochromis_burtoni
ENSFALG00000003407CSDE110077.193ENSHGLG00000019549-10077.193Heterocephalus_glaber_female
ENSFALG00000003407CSDE19977.146ENSHGLG00000007471-9877.146Heterocephalus_glaber_female
ENSFALG00000003407CSDE19981.175ENSHGLG00000008555-9981.175Heterocephalus_glaber_female
ENSFALG00000003407CSDE19678.842ENSHGLG00000010039-10078.842Heterocephalus_glaber_female
ENSFALG00000003407CSDE110083.333ENSHGLG00000009620-10083.584Heterocephalus_glaber_female
ENSFALG00000003407CSDE110079.198ENSHGLG00000003829-10079.198Heterocephalus_glaber_female
ENSFALG00000003407CSDE19974.279ENSHGLG00000000650-9974.279Heterocephalus_glaber_female
ENSFALG00000003407CSDE19772.160ENSHGLG00100004833-10072.160Heterocephalus_glaber_male
ENSFALG00000003407CSDE110072.180ENSHGLG00100001846-10072.180Heterocephalus_glaber_male
ENSFALG00000003407CSDE110091.980ENSHGLG00100019438-10091.980Heterocephalus_glaber_male
ENSFALG00000003407CSDE19474.799ENSHGLG00100004195-10074.799Heterocephalus_glaber_male
ENSFALG00000003407CSDE19679.065ENSHGLG00100006910-10079.065Heterocephalus_glaber_male
ENSFALG00000003407CSDE19974.905ENSHGLG00100007287-9874.905Heterocephalus_glaber_male
ENSFALG00000003407CSDE19978.598ENSHGLG00100002245-9978.598Heterocephalus_glaber_male
ENSFALG00000003407CSDE110074.812ENSHGLG00100012072-10074.879Heterocephalus_glaber_male
ENSFALG00000003407CSDE110076.875ENSHCOG00000004158csde110074.250Hippocampus_comes
ENSFALG00000003407CSDE110074.938ENSIPUG00000000355csde110074.938Ictalurus_punctatus
ENSFALG00000003407CSDE18677.956ENSSTOG00000032722-9877.956Ictidomys_tridecemlineatus
ENSFALG00000003407CSDE110075.000ENSSTOG00000030994-10075.000Ictidomys_tridecemlineatus
ENSFALG00000003407CSDE110091.604ENSJJAG00000019571Csde110091.604Jaculus_jaculus
ENSFALG00000003407CSDE110077.888ENSKMAG00000005685csde110077.503Kryptolebias_marmoratus
ENSFALG00000003407CSDE110077.195ENSLBEG00000014770csde110076.404Labrus_bergylta
ENSFALG00000003407CSDE110080.149ENSLACG00000018452CSDE19480.149Latimeria_chalumnae
ENSFALG00000003407CSDE110081.430ENSLOCG00000010413csde19481.430Lepisosteus_oculatus
ENSFALG00000003407CSDE110087.594ENSLAFG00000007150CSDE19687.594Loxodonta_africana
ENSFALG00000003407CSDE110091.980ENSMFAG00000003674CSDE110088.095Macaca_fascicularis
ENSFALG00000003407CSDE110091.980ENSMMUG00000001974CSDE110088.095Macaca_mulatta
ENSFALG00000003407CSDE110091.980ENSMNEG00000045247CSDE19591.980Macaca_nemestrina
ENSFALG00000003407CSDE110091.729ENSMLEG00000038673CSDE19591.729Mandrillus_leucophaeus
ENSFALG00000003407CSDE110077.778ENSMAMG00000008821csde110076.875Mastacembelus_armatus
ENSFALG00000003407CSDE110078.500ENSMZEG00005021675csde110075.875Maylandia_zebra
ENSFALG00000003407CSDE19898.464ENSMGAG00000016381CSDE19898.464Meleagris_gallopavo
ENSFALG00000003407CSDE110091.604ENSMAUG00000014031Csde110091.604Mesocricetus_auratus
ENSFALG00000003407CSDE110091.479ENSMICG00000002050CSDE19987.723Microcebus_murinus
ENSFALG00000003407CSDE110091.479ENSMOCG00000018960Csde110091.479Microtus_ochrogaster
ENSFALG00000003407CSDE110076.030ENSMMOG00000015075csde110076.030Mola_mola
ENSFALG00000003407CSDE110092.982ENSMODG00000004685CSDE110092.982Monodelphis_domestica
ENSFALG00000003407CSDE110076.309ENSMALG00000007132csde110076.309Monopterus_albus
ENSFALG00000003407CSDE110091.729MGP_CAROLIEiJ_G0025444Csde19797.945Mus_caroli
ENSFALG00000003407CSDE110091.604ENSMUSG00000068823Csde19797.945Mus_musculus
ENSFALG00000003407CSDE110091.604MGP_PahariEiJ_G0026888Csde19797.945Mus_pahari
ENSFALG00000003407CSDE110091.604MGP_SPRETEiJ_G0026394Csde19797.945Mus_spretus
ENSFALG00000003407CSDE19891.944ENSMPUG00000005753CSDE19991.944Mustela_putorius_furo
ENSFALG00000003407CSDE110087.343ENSMLUG00000005681CSDE19487.343Myotis_lucifugus
ENSFALG00000003407CSDE19762.806ENSNGAG00000012599-10062.806Nannospalax_galili
ENSFALG00000003407CSDE110091.479ENSNGAG00000021929Csde110091.479Nannospalax_galili
ENSFALG00000003407CSDE110075.875ENSNBRG00000020808csde110075.875Neolamprologus_brichardi
ENSFALG00000003407CSDE110091.855ENSNLEG00000004842CSDE19591.855Nomascus_leucogenys
ENSFALG00000003407CSDE19898.058ENSMEUG00000002677CSDE19598.058Notamacropus_eugenii
ENSFALG00000003407CSDE19896.117ENSOPRG00000005002CSDE17696.117Ochotona_princeps
ENSFALG00000003407CSDE19760.619ENSODEG00000005979-9860.619Octodon_degus
ENSFALG00000003407CSDE110091.980ENSODEG00000007383-10091.980Octodon_degus
ENSFALG00000003407CSDE110076.679ENSONIG00000009309csde110076.679Oreochromis_niloticus
ENSFALG00000003407CSDE110077.681ENSOANG00000003346-10077.681Ornithorhynchus_anatinus
ENSFALG00000003407CSDE110091.353ENSOCUG00000016438CSDE19591.353Oryctolagus_cuniculus
ENSFALG00000003407CSDE110076.895ENSORLG00000000707csde110076.895Oryzias_latipes
ENSFALG00000003407CSDE110078.473ENSORLG00020005148csde110076.650Oryzias_latipes_hni
ENSFALG00000003407CSDE110078.473ENSORLG00015019415csde110076.650Oryzias_latipes_hsok
ENSFALG00000003407CSDE110078.500ENSOMEG00000015656csde110076.679Oryzias_melastigma
ENSFALG00000003407CSDE110088.221ENSOGAG00000012127CSDE19488.221Otolemur_garnettii
ENSFALG00000003407CSDE110087.719ENSOARG00000020034CSDE19487.719Ovis_aries
ENSFALG00000003407CSDE110091.980ENSPPAG00000025861CSDE110088.095Pan_paniscus
ENSFALG00000003407CSDE110091.980ENSPPRG00000006747CSDE19591.980Panthera_pardus
ENSFALG00000003407CSDE110091.980ENSPTIG00000015468CSDE110091.980Panthera_tigris_altaica
ENSFALG00000003407CSDE110091.980ENSPTRG00000033721CSDE110091.980Pan_troglodytes
ENSFALG00000003407CSDE110091.980ENSPANG00000018873CSDE110088.095Papio_anubis
ENSFALG00000003407CSDE110074.969ENSPKIG00000009459csde110074.969Paramormyrops_kingsleyae
ENSFALG00000003407CSDE19596.000ENSPSIG00000003823CSDE19696.000Pelodiscus_sinensis
ENSFALG00000003407CSDE110075.125ENSPMGG00000000772csde110075.125Periophthalmus_magnuspinnatus
ENSFALG00000003407CSDE110091.729ENSPEMG00000020357-10091.729Peromyscus_maniculatus_bairdii
ENSFALG00000003407CSDE110093.233ENSPCIG00000022587CSDE110093.233Phascolarctos_cinereus
ENSFALG00000003407CSDE19978.261ENSPFOG00000012664csde110078.727Poecilia_formosa
ENSFALG00000003407CSDE19774.080ENSPLAG00000017680csde19374.080Poecilia_latipinna
ENSFALG00000003407CSDE19873.748ENSPMEG00000005094csde19673.748Poecilia_mexicana
ENSFALG00000003407CSDE110078.607ENSPREG00000011631csde110076.351Poecilia_reticulata
ENSFALG00000003407CSDE110091.855ENSPPYG00000000996CSDE110091.855Pongo_abelii
ENSFALG00000003407CSDE110097.087ENSPCAG00000014368CSDE19097.087Procavia_capensis
ENSFALG00000003407CSDE19082.090ENSPCOG00000008223-9082.090Propithecus_coquereli
ENSFALG00000003407CSDE110091.729ENSPCOG00000017893CSDE110091.729Propithecus_coquereli
ENSFALG00000003407CSDE110083.333ENSPVAG00000008225CSDE19583.333Pteropus_vampyrus
ENSFALG00000003407CSDE110077.861ENSPNYG00000013745csde110075.875Pundamilia_nyererei
ENSFALG00000003407CSDE110077.903ENSPNAG00000001958csde110075.156Pygocentrus_nattereri
ENSFALG00000003407CSDE110091.479ENSRNOG00000061058Csde110091.479Rattus_norvegicus
ENSFALG00000003407CSDE110088.596ENSRBIG00000038088-9987.766Rhinopithecus_bieti
ENSFALG00000003407CSDE110086.534ENSRBIG00000038966-9486.658Rhinopithecus_bieti
ENSFALG00000003407CSDE110091.980ENSRROG00000043101CSDE19591.980Rhinopithecus_roxellana
ENSFALG00000003407CSDE110092.105ENSSBOG00000035592CSDE19592.105Saimiri_boliviensis_boliviensis
ENSFALG00000003407CSDE110089.223ENSSHAG00000009831CSDE110089.223Sarcophilus_harrisii
ENSFALG00000003407CSDE110078.607ENSSFOG00015007498csde110078.856Scleropages_formosus
ENSFALG00000003407CSDE110076.923ENSSMAG00000007203csde110076.923Scophthalmus_maximus
ENSFALG00000003407CSDE110077.045ENSSDUG00000015380csde110076.250Seriola_dumerili
ENSFALG00000003407CSDE110078.875ENSSLDG00000008819csde110078.875Seriola_lalandi_dorsalis
ENSFALG00000003407CSDE110088.221ENSSARG00000000738CSDE19488.221Sorex_araneus
ENSFALG00000003407CSDE110096.608ENSSPUG00000008714CSDE110096.608Sphenodon_punctatus
ENSFALG00000003407CSDE110079.125ENSSPAG00000000716csde110076.500Stegastes_partitus
ENSFALG00000003407CSDE110091.980ENSSSCG00000006752CSDE110088.095Sus_scrofa
ENSFALG00000003407CSDE110098.622ENSTGUG00000000972CSDE110098.622Taeniopygia_guttata
ENSFALG00000003407CSDE110073.810ENSTRUG00000007996csde110073.810Takifugu_rubripes
ENSFALG00000003407CSDE19382.510ENSTNIG00000010878csde110082.510Tetraodon_nigroviridis
ENSFALG00000003407CSDE18994.872ENSTBEG00000011880-6094.872Tupaia_belangeri
ENSFALG00000003407CSDE110087.594ENSTTRG00000015583CSDE19487.594Tursiops_truncatus
ENSFALG00000003407CSDE18695.050ENSUAMG00000021779-9795.050Ursus_americanus
ENSFALG00000003407CSDE19082.822ENSUAMG00000024289-9982.822Ursus_americanus
ENSFALG00000003407CSDE19787.173ENSUMAG00000011714-9987.173Ursus_maritimus
ENSFALG00000003407CSDE110081.328ENSUMAG00000009720-9781.328Ursus_maritimus
ENSFALG00000003407CSDE110092.019ENSVPAG00000000749CSDE17992.019Vicugna_pacos
ENSFALG00000003407CSDE19091.520ENSVVUG00000009890CSDE19491.520Vulpes_vulpes
ENSFALG00000003407CSDE110086.267ENSXETG00000021448csde110086.267Xenopus_tropicalis
ENSFALG00000003407CSDE19287.273ENSXCOG00000000035csde18587.273Xiphophorus_couchianus
ENSFALG00000003407CSDE110079.625ENSXMAG00000009080csde110077.427Xiphophorus_maculatus

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