EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000003612 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 974 bases
Position: chrJH603193.1:3723156-3724129
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003761	PRP38	PF03371.15	2.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003776	-	900	-	ENSFALP00000003761	300 (aa)	-	U3JLV7

Gene Model

Click here to download ENSFALG00000003612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000003612	-	63	93.158	ENSFALG00000005598	-	99	86.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003612	-	77	90.043	ENSG00000134748	PRPF38A	99	84.887	Homo_sapiens
ENSFALG00000003612	-	73	84.862	ENSAPOG00000011652	prpf38a	99	76.452	Acanthochromis_polyacanthus
ENSFALG00000003612	-	77	90.043	ENSAMEG00000009319	PRPF38A	99	84.887	Ailuropoda_melanoleuca
ENSFALG00000003612	-	73	82.110	ENSACIG00000012292	prpf38a	99	74.510	Amphilophus_citrinellus
ENSFALG00000003612	-	73	84.862	ENSAOCG00000018004	prpf38a	99	76.452	Amphiprion_ocellaris
ENSFALG00000003612	-	73	84.862	ENSAPEG00000021414	prpf38a	99	76.452	Amphiprion_percula
ENSFALG00000003612	-	62	87.701	ENSATEG00000004608	prpf38a	99	75.484	Anabas_testudineus
ENSFALG00000003612	-	55	92.169	ENSAPLG00000005827	PRPF38A	99	84.959	Anas_platyrhynchos
ENSFALG00000003612	-	77	87.879	ENSACAG00000008249	PRPF38A	99	83.280	Anolis_carolinensis
ENSFALG00000003612	-	77	90.043	ENSANAG00000027839	PRPF38A	99	84.887	Aotus_nancymaae
ENSFALG00000003612	-	99	61.039	ENSANAG00000029204	-	99	60.443	Aotus_nancymaae
ENSFALG00000003612	-	73	83.028	ENSACLG00000021595	prpf38a	99	75.484	Astatotilapia_calliptera
ENSFALG00000003612	-	73	81.818	ENSAMXG00000029274	prpf38a	99	72.930	Astyanax_mexicanus
ENSFALG00000003612	-	83	85.659	ENSBTAG00000002720	PRPF38A	99	84.887	Bos_taurus
ENSFALG00000003612	-	65	61.026	WBGene00008380	prp-38	59	62.766	Caenorhabditis_elegans
ENSFALG00000003612	-	83	84.496	ENSCJAG00000021594	PRPF38A	99	84.887	Callithrix_jacchus
ENSFALG00000003612	-	77	90.043	ENSCAFG00000003740	PRPF38A	99	84.887	Canis_familiaris
ENSFALG00000003612	-	77	90.043	ENSCAFG00020010939	PRPF38A	99	84.887	Canis_lupus_dingo
ENSFALG00000003612	-	77	90.043	ENSCHIG00000024730	PRPF38A	99	84.887	Capra_hircus
ENSFALG00000003612	-	63	88.830	ENSTSYG00000031994	-	95	83.209	Carlito_syrichta
ENSFALG00000003612	-	77	90.043	ENSTSYG00000009868	-	99	84.887	Carlito_syrichta
ENSFALG00000003612	-	99	83.495	ENSCPOG00000005079	PRPF38A	99	85.437	Cavia_porcellus
ENSFALG00000003612	-	77	90.043	ENSCCAG00000026502	PRPF38A	99	85.161	Cebus_capucinus
ENSFALG00000003612	-	94	55.903	ENSCATG00000044190	-	99	55.627	Cercocebus_atys
ENSFALG00000003612	-	77	90.043	ENSCATG00000032296	PRPF38A	99	84.887	Cercocebus_atys
ENSFALG00000003612	-	77	90.043	ENSCLAG00000005816	PRPF38A	99	84.887	Chinchilla_lanigera
ENSFALG00000003612	-	55	88.542	ENSCHOG00000008388	PRPF38A	77	88.542	Choloepus_hoffmanni
ENSFALG00000003612	-	77	90.476	ENSCPBG00000014791	PRPF38A	99	85.209	Chrysemys_picta_bellii
ENSFALG00000003612	-	75	68.750	ENSCSAVG00000009580	-	62	73.936	Ciona_savignyi
ENSFALG00000003612	-	77	90.043	ENSCANG00000032608	PRPF38A	100	85.284	Colobus_angolensis_palliatus
ENSFALG00000003612	-	77	76.623	ENSCGRG00001002557	-	91	70.775	Cricetulus_griseus_chok1gshd
ENSFALG00000003612	-	77	90.043	ENSCGRG00001018502	-	99	84.887	Cricetulus_griseus_chok1gshd
ENSFALG00000003612	-	77	90.043	ENSCGRG00000014868	Prpf38a	99	84.887	Cricetulus_griseus_crigri
ENSFALG00000003612	-	73	83.486	ENSCSEG00000001269	prpf38a	100	76.109	Cynoglossus_semilaevis
ENSFALG00000003612	-	73	84.862	ENSCVAG00000012305	prpf38a	99	76.452	Cyprinodon_variegatus
ENSFALG00000003612	-	73	81.818	ENSDARG00000039213	prpf38a	99	72.930	Danio_rerio
ENSFALG00000003612	-	77	90.043	ENSDNOG00000042326	PRPF38A	99	84.887	Dasypus_novemcinctus
ENSFALG00000003612	-	85	75.954	ENSDORG00000023691	-	79	81.579	Dipodomys_ordii
ENSFALG00000003612	-	77	72.727	ENSDORG00000023857	-	99	72.026	Dipodomys_ordii
ENSFALG00000003612	-	85	75.954	ENSDORG00000025371	-	79	81.579	Dipodomys_ordii
ENSFALG00000003612	-	66	71.066	FBgn0050342	Prp38	57	71.809	Drosophila_melanogaster
ENSFALG00000003612	-	79	76.050	ENSEBUG00000012588	prpf38a	99	70.645	Eptatretus_burgeri
ENSFALG00000003612	-	77	90.043	ENSEASG00005014427	PRPF38A	99	84.887	Equus_asinus_asinus
ENSFALG00000003612	-	77	90.043	ENSECAG00000022628	PRPF38A	99	84.887	Equus_caballus
ENSFALG00000003612	-	73	80.734	ENSELUG00000021094	prpf38a	100	74.411	Esox_lucius
ENSFALG00000003612	-	77	90.043	ENSFCAG00000002518	PRPF38A	99	84.887	Felis_catus
ENSFALG00000003612	-	99	84.740	ENSFDAG00000011287	PRPF38A	99	84.740	Fukomys_damarensis
ENSFALG00000003612	-	72	83.871	ENSFHEG00000014317	prpf38a	100	76.431	Fundulus_heteroclitus
ENSFALG00000003612	-	55	89.759	ENSGMOG00000011384	prpf38a	54	89.759	Gadus_morhua
ENSFALG00000003612	-	77	91.775	ENSGALG00000010627	PRPF38A	99	86.174	Gallus_gallus
ENSFALG00000003612	-	73	85.780	ENSGAFG00000012422	prpf38a	99	77.419	Gambusia_affinis
ENSFALG00000003612	-	73	82.273	ENSGACG00000005423	prpf38a	99	75.321	Gasterosteus_aculeatus
ENSFALG00000003612	-	77	90.476	ENSGAGG00000020547	PRPF38A	99	85.209	Gopherus_agassizii
ENSFALG00000003612	-	77	90.043	ENSGGOG00000003940	PRPF38A	99	84.887	Gorilla_gorilla
ENSFALG00000003612	-	63	86.772	ENSHBUG00000020572	prpf38a	80	86.702	Haplochromis_burtoni
ENSFALG00000003612	-	99	74.342	ENSHGLG00000007918	-	99	73.684	Heterocephalus_glaber_female
ENSFALG00000003612	-	77	90.043	ENSHGLG00000000475	PRPF38A	99	84.887	Heterocephalus_glaber_female
ENSFALG00000003612	-	77	90.043	ENSHGLG00100008935	PRPF38A	99	84.887	Heterocephalus_glaber_male
ENSFALG00000003612	-	99	74.342	ENSHGLG00100003928	-	99	73.684	Heterocephalus_glaber_male
ENSFALG00000003612	-	61	87.363	ENSHCOG00000020781	prpf38a	71	76.754	Hippocampus_comes
ENSFALG00000003612	-	77	80.603	ENSIPUG00000005757	prpf38a	100	72.524	Ictalurus_punctatus
ENSFALG00000003612	-	77	90.043	ENSSTOG00000015610	PRPF38A	99	84.887	Ictidomys_tridecemlineatus
ENSFALG00000003612	-	77	89.177	ENSJJAG00000015811	Prpf38a	99	84.244	Jaculus_jaculus
ENSFALG00000003612	-	73	84.404	ENSKMAG00000006588	prpf38a	99	76.623	Kryptolebias_marmoratus
ENSFALG00000003612	-	73	81.651	ENSLBEG00000020585	prpf38a	99	74.516	Labrus_bergylta
ENSFALG00000003612	-	75	84.889	ENSLACG00000011495	PRPF38A	99	80.064	Latimeria_chalumnae
ENSFALG00000003612	-	63	88.360	ENSLOCG00000006262	prpf38a	99	76.129	Lepisosteus_oculatus
ENSFALG00000003612	-	77	90.043	ENSLAFG00000025862	PRPF38A	99	84.887	Loxodonta_africana
ENSFALG00000003612	-	83	84.496	ENSMFAG00000039449	PRPF38A	99	84.887	Macaca_fascicularis
ENSFALG00000003612	-	64	89.005	ENSMMUG00000014333	PRPF38A	97	83.395	Macaca_mulatta
ENSFALG00000003612	-	94	54.861	ENSMNEG00000040242	-	99	55.305	Macaca_nemestrina
ENSFALG00000003612	-	77	90.043	ENSMNEG00000031221	PRPF38A	99	84.887	Macaca_nemestrina
ENSFALG00000003612	-	77	90.043	ENSMLEG00000041105	PRPF38A	99	84.887	Mandrillus_leucophaeus
ENSFALG00000003612	-	73	84.404	ENSMAMG00000015431	prpf38a	99	76.452	Mastacembelus_armatus
ENSFALG00000003612	-	73	83.028	ENSMZEG00005017838	prpf38a	99	75.484	Maylandia_zebra
ENSFALG00000003612	-	77	91.775	ENSMGAG00000011176	PRPF38A	100	86.622	Meleagris_gallopavo
ENSFALG00000003612	-	86	80.303	ENSMAUG00000018029	-	87	85.153	Mesocricetus_auratus
ENSFALG00000003612	-	77	90.043	ENSMICG00000014193	PRPF38A	99	84.887	Microcebus_murinus
ENSFALG00000003612	-	77	90.043	ENSMOCG00000013080	Prpf38a	99	84.887	Microtus_ochrogaster
ENSFALG00000003612	-	83	75.889	ENSMMOG00000016972	prpf38a	99	73.052	Mola_mola
ENSFALG00000003612	-	77	86.638	ENSMODG00000000644	PRPF38A	99	82.692	Monodelphis_domestica
ENSFALG00000003612	-	73	83.486	ENSMALG00000019363	prpf38a	97	76.129	Monopterus_albus
ENSFALG00000003612	-	77	89.610	MGP_CAROLIEiJ_G0026269	Prpf38a	99	84.566	Mus_caroli
ENSFALG00000003612	-	77	89.610	ENSMUSG00000063800	Prpf38a	99	84.566	Mus_musculus
ENSFALG00000003612	-	77	89.610	MGP_PahariEiJ_G0028602	Prpf38a	99	84.566	Mus_pahari
ENSFALG00000003612	-	77	89.610	MGP_SPRETEiJ_G0027238	Prpf38a	93	91.489	Mus_spretus
ENSFALG00000003612	-	77	90.043	ENSMPUG00000006896	PRPF38A	99	84.887	Mustela_putorius_furo
ENSFALG00000003612	-	99	86.275	ENSNGAG00000011884	Prpf38a	99	86.601	Nannospalax_galili
ENSFALG00000003612	-	73	81.651	ENSNBRG00000004013	prpf38a	98	74.183	Neolamprologus_brichardi
ENSFALG00000003612	-	94	53.819	ENSNLEG00000033398	-	94	55.305	Nomascus_leucogenys
ENSFALG00000003612	-	97	61.589	ENSNLEG00000012592	-	99	63.245	Nomascus_leucogenys
ENSFALG00000003612	-	69	89.904	ENSNLEG00000017999	PRPF38A	92	84.375	Nomascus_leucogenys
ENSFALG00000003612	-	77	84.416	ENSMEUG00000003860	PRPF38A	99	80.707	Notamacropus_eugenii
ENSFALG00000003612	-	76	89.956	ENSOPRG00000008985	PRPF38A	95	89.956	Ochotona_princeps
ENSFALG00000003612	-	77	90.043	ENSODEG00000005869	PRPF38A	99	84.887	Octodon_degus
ENSFALG00000003612	-	73	82.110	ENSONIG00000007816	prpf38a	99	74.839	Oreochromis_niloticus
ENSFALG00000003612	-	77	48.069	ENSOANG00000009541	-	99	53.674	Ornithorhynchus_anatinus
ENSFALG00000003612	-	77	90.043	ENSOCUG00000000963	PRPF38A	99	84.887	Oryctolagus_cuniculus
ENSFALG00000003612	-	73	84.862	ENSORLG00000013485	prpf38a	99	77.104	Oryzias_latipes
ENSFALG00000003612	-	73	84.862	ENSORLG00020002130	prpf38a	99	77.104	Oryzias_latipes_hni
ENSFALG00000003612	-	76	81.938	ENSORLG00015021393	prpf38a	100	76.768	Oryzias_latipes_hsok
ENSFALG00000003612	-	73	84.404	ENSOMEG00000016333	prpf38a	99	76.129	Oryzias_melastigma
ENSFALG00000003612	-	77	90.043	ENSOGAG00000005423	PRPF38A	99	84.887	Otolemur_garnettii
ENSFALG00000003612	-	77	90.043	ENSOARG00000005373	PRPF38A	99	84.887	Ovis_aries
ENSFALG00000003612	-	77	90.043	ENSPPAG00000030905	PRPF38A	99	84.887	Pan_paniscus
ENSFALG00000003612	-	94	65.972	ENSPPAG00000033867	-	99	67.203	Pan_paniscus
ENSFALG00000003612	-	77	90.043	ENSPPRG00000013268	PRPF38A	99	84.887	Panthera_pardus
ENSFALG00000003612	-	77	90.043	ENSPTIG00000015419	PRPF38A	99	84.887	Panthera_tigris_altaica
ENSFALG00000003612	-	83	84.496	ENSPTRG00000000739	PRPF38A	99	84.887	Pan_troglodytes
ENSFALG00000003612	-	77	90.043	ENSPANG00000015483	PRPF38A	99	84.887	Papio_anubis
ENSFALG00000003612	-	63	86.170	ENSPKIG00000011439	prpf38a	99	75.081	Paramormyrops_kingsleyae
ENSFALG00000003612	-	77	90.043	ENSPSIG00000017487	PRPF38A	99	84.887	Pelodiscus_sinensis
ENSFALG00000003612	-	72	83.410	ENSPMGG00000021352	prpf38a	99	74.419	Periophthalmus_magnuspinnatus
ENSFALG00000003612	-	77	90.043	ENSPEMG00000023277	-	99	84.887	Peromyscus_maniculatus_bairdii
ENSFALG00000003612	-	99	77.707	ENSPEMG00000011212	-	99	78.981	Peromyscus_maniculatus_bairdii
ENSFALG00000003612	-	77	86.638	ENSPCIG00000022369	-	99	82.692	Phascolarctos_cinereus
ENSFALG00000003612	-	73	85.780	ENSPFOG00000004248	prpf38a	99	77.419	Poecilia_formosa
ENSFALG00000003612	-	94	72.125	ENSPLAG00000010328	prpf38a	99	77.419	Poecilia_latipinna
ENSFALG00000003612	-	86	75.954	ENSPMEG00000011804	prpf38a	99	77.419	Poecilia_mexicana
ENSFALG00000003612	-	84	74.713	ENSPREG00000002835	prpf38a	58	88.830	Poecilia_reticulata
ENSFALG00000003612	-	77	79.661	ENSPPYG00000001348	PRPF38A	99	77.215	Pongo_abelii
ENSFALG00000003612	-	77	90.043	ENSPCAG00000013328	PRPF38A	99	84.887	Procavia_capensis
ENSFALG00000003612	-	99	67.333	ENSPCOG00000020709	-	99	69.667	Propithecus_coquereli
ENSFALG00000003612	-	77	90.043	ENSPCOG00000016387	-	99	84.887	Propithecus_coquereli
ENSFALG00000003612	-	77	90.043	ENSPVAG00000009803	PRPF38A	99	84.887	Pteropus_vampyrus
ENSFALG00000003612	-	73	83.028	ENSPNYG00000005571	prpf38a	99	75.484	Pundamilia_nyererei
ENSFALG00000003612	-	73	82.727	ENSPNAG00000010399	prpf38a	99	73.567	Pygocentrus_nattereri
ENSFALG00000003612	-	77	90.476	ENSRNOG00000009451	Prpf38a	99	85.209	Rattus_norvegicus
ENSFALG00000003612	-	99	51.768	ENSRBIG00000034053	-	99	49.196	Rhinopithecus_bieti
ENSFALG00000003612	-	77	90.043	ENSRBIG00000036442	PRPF38A	100	85.284	Rhinopithecus_bieti
ENSFALG00000003612	-	98	70.234	ENSRROG00000040003	-	99	70.234	Rhinopithecus_roxellana
ENSFALG00000003612	-	99	52.412	ENSRROG00000034606	-	99	47.742	Rhinopithecus_roxellana
ENSFALG00000003612	-	77	90.043	ENSRROG00000032788	PRPF38A	99	84.887	Rhinopithecus_roxellana
ENSFALG00000003612	-	77	90.043	ENSSBOG00000019515	PRPF38A	99	84.887	Saimiri_boliviensis_boliviensis
ENSFALG00000003612	-	80	70.782	ENSSHAG00000006029	-	73	74.771	Sarcophilus_harrisii
ENSFALG00000003612	-	63	85.263	ENSSHAG00000006906	-	99	81.111	Sarcophilus_harrisii
ENSFALG00000003612	-	63	87.234	ENSSFOG00015013572	prpf38a	99	73.871	Scleropages_formosus
ENSFALG00000003612	-	73	82.110	ENSSMAG00000015379	prpf38a	99	75.000	Scophthalmus_maximus
ENSFALG00000003612	-	73	83.486	ENSSDUG00000001324	prpf38a	99	75.806	Seriola_dumerili
ENSFALG00000003612	-	73	83.486	ENSSLDG00000014803	prpf38a	99	75.806	Seriola_lalandi_dorsalis
ENSFALG00000003612	-	77	68.831	ENSSARG00000014458	PRPF38A	99	69.132	Sorex_araneus
ENSFALG00000003612	-	77	88.312	ENSSPUG00000013259	PRPF38A	99	83.601	Sphenodon_punctatus
ENSFALG00000003612	-	73	67.431	ENSSPAG00000010449	prpf38a	99	64.052	Stegastes_partitus
ENSFALG00000003612	-	77	90.043	ENSSSCG00000028288	PRPF38A	99	84.887	Sus_scrofa
ENSFALG00000003612	-	77	88.312	ENSTGUG00000008995	PRPF38A	99	83.601	Taeniopygia_guttata
ENSFALG00000003612	-	73	82.110	ENSTRUG00000003374	prpf38a	70	81.057	Takifugu_rubripes
ENSFALG00000003612	-	73	80.455	ENSTNIG00000005533	prpf38a	99	73.718	Tetraodon_nigroviridis
ENSFALG00000003612	-	77	90.043	ENSTBEG00000000725	PRPF38A	99	84.566	Tupaia_belangeri
ENSFALG00000003612	-	77	90.043	ENSTTRG00000016139	PRPF38A	99	84.887	Tursiops_truncatus
ENSFALG00000003612	-	77	90.043	ENSUAMG00000000625	PRPF38A	99	84.887	Ursus_americanus
ENSFALG00000003612	-	77	90.043	ENSUMAG00000022674	PRPF38A	99	84.887	Ursus_maritimus
ENSFALG00000003612	-	77	89.610	ENSVPAG00000000907	PRPF38A	99	77.707	Vicugna_pacos
ENSFALG00000003612	-	77	90.043	ENSVVUG00000004475	PRPF38A	99	84.887	Vulpes_vulpes
ENSFALG00000003612	-	99	78.205	ENSXETG00000008060	prpf38a	99	80.449	Xenopus_tropicalis
ENSFALG00000003612	-	99	74.419	ENSXCOG00000007393	prpf38a	99	77.705	Xiphophorus_couchianus
ENSFALG00000003612	-	73	85.780	ENSXMAG00000026143	prpf38a	99	77.419	Xiphophorus_maculatus