EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003661 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 18360 bases
Position: chrJH603286.1:390741-409100
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003818	CSD	PF00313.22	2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003833	YBX3-201	5566	-	ENSFALP00000003818	275 (aa)	-	U3JM14

Gene Model

Click here to download ENSFALG00000003661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003661's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003661	YBX3	71	98.837	ENSG00000060138	YBX3	97	89.888	Homo_sapiens
ENSFALG00000003661	YBX3	100	63.194	ENSAMEG00000009393	YBX3	81	65.854	Ailuropoda_melanoleuca
ENSFALG00000003661	YBX3	100	70.370	ENSAPLG00000003147	YBX3	100	70.370	Anas_platyrhynchos
ENSFALG00000003661	YBX3	61	83.333	ENSANAG00000033366	-	61	83.333	Aotus_nancymaae
ENSFALG00000003661	YBX3	71	98.837	ENSANAG00000024492	-	72	94.444	Aotus_nancymaae
ENSFALG00000003661	YBX3	100	63.448	ENSBTAG00000009663	YBX3	75	62.718	Bos_taurus
ENSFALG00000003661	YBX3	71	98.837	ENSCJAG00000021660	-	72	94.444	Callithrix_jacchus
ENSFALG00000003661	YBX3	71	98.837	ENSCAFG00000013401	YBX3	99	94.444	Canis_familiaris
ENSFALG00000003661	YBX3	75	87.629	ENSCAFG00020006412	YBX3	70	85.185	Canis_lupus_dingo
ENSFALG00000003661	YBX3	100	63.066	ENSCHIG00000010863	YBX3	79	66.202	Capra_hircus
ENSFALG00000003661	YBX3	71	98.837	ENSTSYG00000004204	-	84	94.444	Carlito_syrichta
ENSFALG00000003661	YBX3	79	81.481	ENSTSYG00000035821	-	66	97.531	Carlito_syrichta
ENSFALG00000003661	YBX3	100	62.369	ENSCAPG00000015039	YBX3	93	65.157	Cavia_aperea
ENSFALG00000003661	YBX3	100	62.369	ENSCPOG00000011329	YBX3	80	94.444	Cavia_porcellus
ENSFALG00000003661	YBX3	71	98.837	ENSCCAG00000016469	YBX3	71	94.444	Cebus_capucinus
ENSFALG00000003661	YBX3	71	98.837	ENSCATG00000034411	YBX3	71	94.444	Cercocebus_atys
ENSFALG00000003661	YBX3	100	62.976	ENSCLAG00000016030	YBX3	93	65.157	Chinchilla_lanigera
ENSFALG00000003661	YBX3	100	61.806	ENSCSAG00000008744	YBX3	76	65.625	Chlorocebus_sabaeus
ENSFALG00000003661	YBX3	77	97.030	ENSCPBG00000014147	YBX3	74	97.030	Chrysemys_picta_bellii
ENSFALG00000003661	YBX3	71	98.837	ENSCANG00000036801	YBX3	88	94.444	Colobus_angolensis_palliatus
ENSFALG00000003661	YBX3	71	98.837	ENSCGRG00001016148	Ybx3	73	94.444	Cricetulus_griseus_chok1gshd
ENSFALG00000003661	YBX3	100	60.410	ENSCGRG00000004563	Ybx3	97	63.230	Cricetulus_griseus_crigri
ENSFALG00000003661	YBX3	100	64.014	ENSDORG00000009103	Ybx3	80	66.899	Dipodomys_ordii
ENSFALG00000003661	YBX3	99	56.207	ENSETEG00000002557	YBX3	99	56.643	Echinops_telfairi
ENSFALG00000003661	YBX3	100	64.286	ENSEASG00005014726	YBX3	67	87.912	Equus_asinus_asinus
ENSFALG00000003661	YBX3	75	87.629	ENSECAG00000013777	YBX3	71	85.185	Equus_caballus
ENSFALG00000003661	YBX3	99	60.279	ENSEEUG00000010415	YBX3	100	64.111	Erinaceus_europaeus
ENSFALG00000003661	YBX3	71	98.837	ENSFCAG00000027748	YBX3	71	94.444	Felis_catus
ENSFALG00000003661	YBX3	100	63.986	ENSFDAG00000021192	YBX3	91	64.336	Fukomys_damarensis
ENSFALG00000003661	YBX3	100	68.000	ENSGALG00000031890	YBX3	74	68.000	Gallus_gallus
ENSFALG00000003661	YBX3	78	97.115	ENSGAGG00000017780	YBX3	74	97.115	Gopherus_agassizii
ENSFALG00000003661	YBX3	71	98.837	ENSGGOG00000001352	YBX3	71	94.444	Gorilla_gorilla
ENSFALG00000003661	YBX3	91	58.779	ENSHGLG00000015495	-	77	58.779	Heterocephalus_glaber_female
ENSFALG00000003661	YBX3	91	58.687	ENSHGLG00000014798	-	84	56.944	Heterocephalus_glaber_female
ENSFALG00000003661	YBX3	100	60.351	ENSSTOG00000002108	-	88	60.351	Ictidomys_tridecemlineatus
ENSFALG00000003661	YBX3	100	60.839	ENSSTOG00000032577	-	80	61.324	Ictidomys_tridecemlineatus
ENSFALG00000003661	YBX3	78	75.789	ENSJJAG00000014239	Ybx3	90	84.615	Jaculus_jaculus
ENSFALG00000003661	YBX3	100	64.111	ENSLAFG00000017247	YBX3	83	62.324	Loxodonta_africana
ENSFALG00000003661	YBX3	71	98.837	ENSMFAG00000039369	YBX3	71	94.444	Macaca_fascicularis
ENSFALG00000003661	YBX3	100	61.806	ENSMMUG00000022469	YBX3	88	65.625	Macaca_mulatta
ENSFALG00000003661	YBX3	71	98.837	ENSMNEG00000045109	YBX3	71	94.444	Macaca_nemestrina
ENSFALG00000003661	YBX3	71	98.837	ENSMLEG00000033618	YBX3	76	94.444	Mandrillus_leucophaeus
ENSFALG00000003661	YBX3	100	71.777	ENSMGAG00000014224	YBX3	99	71.777	Meleagris_gallopavo
ENSFALG00000003661	YBX3	71	98.837	ENSMAUG00000012185	Ybx3	85	94.444	Mesocricetus_auratus
ENSFALG00000003661	YBX3	100	63.066	ENSMICG00000038002	-	77	65.854	Microcebus_murinus
ENSFALG00000003661	YBX3	86	68.627	ENSMICG00000031459	-	54	71.724	Microcebus_murinus
ENSFALG00000003661	YBX3	71	98.837	ENSMOCG00000016291	Ybx3	91	94.444	Microtus_ochrogaster
ENSFALG00000003661	YBX3	100	64.437	ENSMODG00000018248	YBX3	91	64.236	Monodelphis_domestica
ENSFALG00000003661	YBX3	71	98.837	MGP_CAROLIEiJ_G0028947	Ybx3	73	94.444	Mus_caroli
ENSFALG00000003661	YBX3	71	98.837	ENSMUSG00000030189	Ybx3	78	64.336	Mus_musculus
ENSFALG00000003661	YBX3	71	98.837	MGP_PahariEiJ_G0022709	Ybx3	73	94.444	Mus_pahari
ENSFALG00000003661	YBX3	71	98.837	MGP_SPRETEiJ_G0029994	Ybx3	73	94.444	Mus_spretus
ENSFALG00000003661	YBX3	100	48.299	ENSMPUG00000011810	YBX3	77	51.536	Mustela_putorius_furo
ENSFALG00000003661	YBX3	93	59.926	ENSMLUG00000007476	YBX3	100	62.132	Myotis_lucifugus
ENSFALG00000003661	YBX3	78	86.111	ENSNGAG00000000710	Ybx3	88	86.111	Nannospalax_galili
ENSFALG00000003661	YBX3	100	59.722	ENSNLEG00000034844	YBX3	76	84.259	Nomascus_leucogenys
ENSFALG00000003661	YBX3	80	58.369	ENSODEG00000017957	YBX3	84	60.627	Octodon_degus
ENSFALG00000003661	YBX3	95	59.420	ENSOCUG00000001889	YBX3	81	60.563	Oryctolagus_cuniculus
ENSFALG00000003661	YBX3	100	63.140	ENSOGAG00000013245	YBX3	77	65.870	Otolemur_garnettii
ENSFALG00000003661	YBX3	100	63.322	ENSOARG00000020919	YBX3	96	66.090	Ovis_aries
ENSFALG00000003661	YBX3	71	98.837	ENSPPAG00000039068	YBX3	74	94.444	Pan_paniscus
ENSFALG00000003661	YBX3	71	98.837	ENSPPRG00000005859	YBX3	71	94.444	Panthera_pardus
ENSFALG00000003661	YBX3	100	64.111	ENSPTIG00000005322	YBX3	80	66.899	Panthera_tigris_altaica
ENSFALG00000003661	YBX3	71	98.837	ENSPTRG00000004681	YBX3	71	94.444	Pan_troglodytes
ENSFALG00000003661	YBX3	71	98.837	ENSPANG00000010280	YBX3	71	94.444	Papio_anubis
ENSFALG00000003661	YBX3	79	96.154	ENSPSIG00000009247	YBX3	100	60.870	Pelodiscus_sinensis
ENSFALG00000003661	YBX3	71	98.837	ENSPEMG00000012132	-	86	94.444	Peromyscus_maniculatus_bairdii
ENSFALG00000003661	YBX3	71	98.837	ENSPEMG00000010391	-	81	94.444	Peromyscus_maniculatus_bairdii
ENSFALG00000003661	YBX3	91	60.311	ENSPCIG00000029949	YBX3	100	56.420	Phascolarctos_cinereus
ENSFALG00000003661	YBX3	100	62.500	ENSPPYG00000004279	YBX3	77	66.319	Pongo_abelii
ENSFALG00000003661	YBX3	71	65.534	ENSPCAG00000001397	YBX3	69	65.672	Procavia_capensis
ENSFALG00000003661	YBX3	73	67.290	ENSPVAG00000006740	YBX3	57	67.290	Pteropus_vampyrus
ENSFALG00000003661	YBX3	71	98.837	ENSRNOG00000005480	Ybx3	73	94.444	Rattus_norvegicus
ENSFALG00000003661	YBX3	71	98.837	ENSRBIG00000039208	YBX3	72	94.444	Rhinopithecus_bieti
ENSFALG00000003661	YBX3	71	98.837	ENSRROG00000029638	YBX3	72	94.444	Rhinopithecus_roxellana
ENSFALG00000003661	YBX3	71	98.837	ENSSBOG00000030573	YBX3	72	94.444	Saimiri_boliviensis_boliviensis
ENSFALG00000003661	YBX3	100	61.433	ENSSHAG00000003262	YBX3	98	61.433	Sarcophilus_harrisii
ENSFALG00000003661	YBX3	71	98.837	ENSSSCG00000000633	YBX3	69	94.444	Sus_scrofa
ENSFALG00000003661	YBX3	100	72.903	ENSTGUG00000012047	YBX3	100	72.903	Taeniopygia_guttata
ENSFALG00000003661	YBX3	99	62.369	ENSTBEG00000012570	YBX3	78	66.202	Tupaia_belangeri
ENSFALG00000003661	YBX3	92	62.406	ENSTTRG00000008045	YBX3	100	62.406	Tursiops_truncatus
ENSFALG00000003661	YBX3	97	59.075	ENSUAMG00000016662	YBX3	100	61.786	Ursus_americanus
ENSFALG00000003661	YBX3	100	63.194	ENSUMAG00000016118	YBX3	94	65.854	Ursus_maritimus
ENSFALG00000003661	YBX3	64	100.000	ENSVPAG00000000876	YBX3	62	100.000	Vicugna_pacos
ENSFALG00000003661	YBX3	97	60.000	ENSVVUG00000004956	YBX3	100	62.857	Vulpes_vulpes
ENSFALG00000003661	YBX3	72	93.023	ENSXETG00000016239	ybx3	78	92.593	Xenopus_tropicalis