EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable E3 ubiquitin-protein ligase makorin-1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 2955 bases
Position: chrJH603249.1:3407802-3410756
Accession: 101820964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003839	zf-CCCH	PF00642.24	1.2e-12	1	2
ENSFALP00000003839	zf-CCCH	PF00642.24	1.2e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003854	-	1685	-	ENSFALP00000003839	408 (aa)	XP_005059595	U3JM35

Gene Model

Click here to download ENSFALG00000003685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003685	-	63	45.000	ENSG00000133606	MKRN1	56	43.860	Homo_sapiens
ENSFALG00000003685	-	75	31.498	ENSAPOG00000006267	mkrn4	86	31.595	Acanthochromis_polyacanthus
ENSFALG00000003685	-	96	31.696	ENSAMEG00000017832	-	79	33.239	Ailuropoda_melanoleuca
ENSFALG00000003685	-	74	32.143	ENSACIG00000001902	mkrn4	93	32.686	Amphilophus_citrinellus
ENSFALG00000003685	-	75	30.909	ENSAPEG00000019319	mkrn4	85	32.381	Amphiprion_percula
ENSFALG00000003685	-	79	33.429	ENSATEG00000009352	mkrn2	80	33.131	Anabas_testudineus
ENSFALG00000003685	-	75	34.603	ENSATEG00000020555	mkrn4	79	35.016	Anabas_testudineus
ENSFALG00000003685	-	79	49.422	ENSACAG00000002322	-	79	49.854	Anolis_carolinensis
ENSFALG00000003685	-	76	31.111	ENSANAG00000022646	MKRN2	82	31.412	Aotus_nancymaae
ENSFALG00000003685	-	75	33.657	ENSACLG00000002368	mkrn4	82	34.295	Astatotilapia_calliptera
ENSFALG00000003685	-	53	49.020	ENSAMXG00000007674	mkrn4	84	36.337	Astyanax_mexicanus
ENSFALG00000003685	-	96	31.626	ENSCAFG00000003953	-	68	33.428	Canis_familiaris
ENSFALG00000003685	-	97	31.498	ENSCAFG00020022139	-	76	33.240	Canis_lupus_dingo
ENSFALG00000003685	-	77	30.571	ENSCHIG00000008394	-	75	30.564	Capra_hircus
ENSFALG00000003685	-	63	43.860	ENSTSYG00000009996	-	51	53.782	Carlito_syrichta
ENSFALG00000003685	-	86	32.918	ENSCAPG00000017879	MKRN1	79	34.758	Cavia_aperea
ENSFALG00000003685	-	86	33.168	ENSCPOG00000000948	MKRN1	78	34.770	Cavia_porcellus
ENSFALG00000003685	-	61	44.000	ENSCCAG00000009054	-	54	44.000	Cebus_capucinus
ENSFALG00000003685	-	76	31.389	ENSCCAG00000019802	MKRN2	82	31.700	Cebus_capucinus
ENSFALG00000003685	-	54	45.000	ENSCATG00000039778	MKRN1	51	53.782	Cercocebus_atys
ENSFALG00000003685	-	85	31.658	ENSCLAG00000001783	MKRN1	78	34.670	Chinchilla_lanigera
ENSFALG00000003685	-	95	31.081	ENSCSAG00000008246	MKRN1	51	53.782	Chlorocebus_sabaeus
ENSFALG00000003685	-	63	53.008	ENSCPBG00000017873	-	92	53.759	Chrysemys_picta_bellii
ENSFALG00000003685	-	68	32.550	ENSCANG00000027803	-	85	32.886	Colobus_angolensis_palliatus
ENSFALG00000003685	-	96	32.401	ENSCANG00000022805	-	69	34.718	Colobus_angolensis_palliatus
ENSFALG00000003685	-	95	30.958	ENSCGRG00000013385	Mkrn1	79	33.429	Cricetulus_griseus_crigri
ENSFALG00000003685	-	94	31.981	ENSDARG00000041665	mkrn1	85	36.066	Danio_rerio
ENSFALG00000003685	-	75	37.500	ENSDARG00000028295	mkrn4	83	36.418	Danio_rerio
ENSFALG00000003685	-	95	31.788	ENSDORG00000003480	Mkrn1	79	35.191	Dipodomys_ordii
ENSFALG00000003685	-	79	36.592	ENSELUG00000011371	mkrn4	83	36.023	Esox_lucius
ENSFALG00000003685	-	75	35.398	ENSFHEG00000011140	mkrn1	67	34.513	Fundulus_heteroclitus
ENSFALG00000003685	-	75	36.170	ENSFHEG00000004528	mkrn4	81	35.443	Fundulus_heteroclitus
ENSFALG00000003685	-	74	34.347	ENSGAFG00000004107	mkrn4	83	33.117	Gambusia_affinis
ENSFALG00000003685	-	62	32.677	ENSGACG00000008285	mkrn4	98	32.677	Gasterosteus_aculeatus
ENSFALG00000003685	-	77	33.143	ENSGACG00000019227	mkrn1	73	32.641	Gasterosteus_aculeatus
ENSFALG00000003685	-	79	30.769	ENSGACG00000003396	mkrn2	80	30.233	Gasterosteus_aculeatus
ENSFALG00000003685	-	97	50.490	ENSGAGG00000010951	-	98	49.644	Gopherus_agassizii
ENSFALG00000003685	-	76	33.056	ENSGAGG00000022563	MKRN2	83	32.941	Gopherus_agassizii
ENSFALG00000003685	-	50	44.928	ENSGGOG00000000429	MKRN2	82	32.267	Gorilla_gorilla
ENSFALG00000003685	-	78	31.579	ENSHBUG00000022825	mkrn4	85	31.889	Haplochromis_burtoni
ENSFALG00000003685	-	76	30.184	ENSHGLG00000018194	MKRN2	55	46.610	Heterocephalus_glaber_female
ENSFALG00000003685	-	76	30.184	ENSHGLG00100004036	MKRN2	55	46.610	Heterocephalus_glaber_male
ENSFALG00000003685	-	78	36.612	ENSIPUG00000000711	mkrn4	82	36.676	Ictalurus_punctatus
ENSFALG00000003685	-	76	31.507	ENSSTOG00000010520	MKRN2	82	31.339	Ictidomys_tridecemlineatus
ENSFALG00000003685	-	96	32.099	ENSJJAG00000010761	-	66	34.277	Jaculus_jaculus
ENSFALG00000003685	-	76	30.861	ENSKMAG00000007023	mkrn4	88	31.157	Kryptolebias_marmoratus
ENSFALG00000003685	-	77	31.965	ENSLBEG00000014889	mkrn4	83	32.059	Labrus_bergylta
ENSFALG00000003685	-	76	32.320	ENSLACG00000007834	MKRN2	82	32.378	Latimeria_chalumnae
ENSFALG00000003685	-	75	38.352	ENSLOCG00000000455	mkrn4	83	40.059	Lepisosteus_oculatus
ENSFALG00000003685	-	53	42.466	ENSMMUG00000009536	MKRN2	53	47.458	Macaca_mulatta
ENSFALG00000003685	-	53	44.643	ENSMMUG00000010420	MKRN1	59	44.068	Macaca_mulatta
ENSFALG00000003685	-	95	31.390	ENSMLEG00000033107	MKRN1	51	53.782	Mandrillus_leucophaeus
ENSFALG00000003685	-	79	31.389	ENSMAMG00000009756	mkrn2	79	31.845	Mastacembelus_armatus
ENSFALG00000003685	-	75	33.544	ENSMAMG00000011051	mkrn4	87	33.544	Mastacembelus_armatus
ENSFALG00000003685	-	75	33.657	ENSMZEG00005001958	mkrn4	86	33.226	Maylandia_zebra
ENSFALG00000003685	-	74	46.429	ENSMMOG00000004759	mkrn4	85	46.429	Mola_mola
ENSFALG00000003685	-	75	33.542	ENSMALG00000018791	mkrn4	82	33.542	Monopterus_albus
ENSFALG00000003685	-	96	31.767	MGP_CAROLIEiJ_G0028246	Mkrn1	78	34.006	Mus_caroli
ENSFALG00000003685	-	96	31.320	ENSMUSG00000029922	Mkrn1	78	33.429	Mus_musculus
ENSFALG00000003685	-	96	31.991	MGP_PahariEiJ_G0022004	Mkrn1	51	54.622	Mus_pahari
ENSFALG00000003685	-	96	31.767	MGP_SPRETEiJ_G0029245	Mkrn1	83	30.592	Mus_spretus
ENSFALG00000003685	-	74	35.826	ENSMLUG00000023455	-	100	34.796	Myotis_lucifugus
ENSFALG00000003685	-	74	32.188	ENSNBRG00000010946	mkrn4	88	33.117	Neolamprologus_brichardi
ENSFALG00000003685	-	76	31.742	ENSNLEG00000004711	MKRN2	82	32.070	Nomascus_leucogenys
ENSFALG00000003685	-	74	33.546	ENSONIG00000011870	mkrn4	86	33.962	Oreochromis_niloticus
ENSFALG00000003685	-	76	30.270	ENSOCUG00000014171	MKRN2	62	47.458	Oryctolagus_cuniculus
ENSFALG00000003685	-	94	34.058	ENSORLG00000012765	mkrn1	50	52.101	Oryzias_latipes
ENSFALG00000003685	-	74	33.022	ENSORLG00000006615	mkrn4	84	32.515	Oryzias_latipes
ENSFALG00000003685	-	74	31.193	ENSORLG00020010514	mkrn4	83	31.975	Oryzias_latipes_hni
ENSFALG00000003685	-	94	34.058	ENSORLG00020020446	mkrn1	50	52.101	Oryzias_latipes_hni
ENSFALG00000003685	-	94	33.816	ENSORLG00015018892	mkrn1	50	52.101	Oryzias_latipes_hsok
ENSFALG00000003685	-	74	30.887	ENSORLG00015002476	mkrn4	83	31.804	Oryzias_latipes_hsok
ENSFALG00000003685	-	74	32.602	ENSOMEG00000020049	mkrn4	83	32.602	Oryzias_melastigma
ENSFALG00000003685	-	94	31.840	ENSOMEG00000019338	mkrn1	50	52.941	Oryzias_melastigma
ENSFALG00000003685	-	76	31.933	ENSPPAG00000036523	MKRN2	82	32.267	Pan_paniscus
ENSFALG00000003685	-	76	31.933	ENSPTRG00000014634	MKRN2	82	32.267	Pan_troglodytes
ENSFALG00000003685	-	79	33.433	ENSPMGG00000016333	-	80	31.348	Periophthalmus_magnuspinnatus
ENSFALG00000003685	-	91	34.794	ENSPCIG00000021244	-	80	38.854	Phascolarctos_cinereus
ENSFALG00000003685	-	75	34.650	ENSPFOG00000024691	mkrn4	83	33.123	Poecilia_formosa
ENSFALG00000003685	-	75	34.347	ENSPLAG00000013447	mkrn4	83	32.808	Poecilia_latipinna
ENSFALG00000003685	-	75	34.018	ENSPMEG00000014195	mkrn4	83	32.177	Poecilia_mexicana
ENSFALG00000003685	-	75	32.923	ENSPREG00000022638	mkrn4	83	32.143	Poecilia_reticulata
ENSFALG00000003685	-	95	30.856	ENSPPYG00000018057	MKRN1	78	32.565	Pongo_abelii
ENSFALG00000003685	-	75	32.903	ENSPNYG00000022367	mkrn4	86	33.226	Pundamilia_nyererei
ENSFALG00000003685	-	88	35.142	ENSPNAG00000017925	mkrn4	83	36.970	Pygocentrus_nattereri
ENSFALG00000003685	-	76	31.389	ENSSBOG00000034434	MKRN2	82	31.700	Saimiri_boliviensis_boliviensis
ENSFALG00000003685	-	61	42.000	ENSSBOG00000027711	-	52	42.000	Saimiri_boliviensis_boliviensis
ENSFALG00000003685	-	90	31.771	ENSSMAG00000019369	mkrn4	79	35.000	Scophthalmus_maximus
ENSFALG00000003685	-	75	31.454	ENSSDUG00000010454	mkrn4	84	33.127	Seriola_dumerili
ENSFALG00000003685	-	75	32.595	ENSSLDG00000004587	mkrn4	84	32.000	Seriola_lalandi_dorsalis
ENSFALG00000003685	-	97	44.096	ENSSPUG00000013809	-	79	48.773	Sphenodon_punctatus
ENSFALG00000003685	-	82	33.159	ENSSSCG00000016498	-	51	53.782	Sus_scrofa
ENSFALG00000003685	-	75	36.218	ENSTRUG00000025139	mkrn4	91	36.364	Takifugu_rubripes
ENSFALG00000003685	-	94	31.527	ENSTRUG00000012057	mkrn1	73	32.710	Takifugu_rubripes
ENSFALG00000003685	-	96	31.707	ENSTTRG00000009528	-	76	33.523	Tursiops_truncatus
ENSFALG00000003685	-	95	31.839	ENSUMAG00000015046	-	78	33.429	Ursus_maritimus
ENSFALG00000003685	-	77	32.425	ENSVVUG00000001720	-	87	33.141	Vulpes_vulpes
ENSFALG00000003685	-	74	34.650	ENSXCOG00000006365	mkrn4	83	32.792	Xiphophorus_couchianus
ENSFALG00000003685	-	74	34.650	ENSXMAG00000010448	mkrn4	91	33.945	Xiphophorus_maculatus