EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003728 (Gene tree)
Gene ID: -
Gene Symbol: HTATSF1
Alias: TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 12217 bases
Position: chrJH603216.1:4600-16816
Accession: 101807016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003892	RRM_1	PF00076.22	3.6e-16	1	2
ENSFALP00000003892	RRM_1	PF00076.22	3.6e-16	2	2
ENSFALP00000003895	RRM_1	PF00076.22	3.6e-16	1	2
ENSFALP00000003895	RRM_1	PF00076.22	3.6e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003908	HTATSF1-201	3272	-	ENSFALP00000003892	453 (aa)	-	U3JM88
ENSFALT00000003911	HTATSF1-202	3194	XM_005045675	ENSFALP00000003895	453 (aa)	XP_005045732	U3JM88

Gene Model

Click here to download ENSFALG00000003728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003728	HTATSF1	87	66.917	ENSG00000102241	HTATSF1	100	61.472	Homo_sapiens
ENSFALG00000003728	HTATSF1	99	58.824	ENSAPOG00000009823	htatsf1	99	58.606	Acanthochromis_polyacanthus
ENSFALG00000003728	HTATSF1	87	67.742	ENSAMEG00000002921	HTATSF1	50	67.939	Ailuropoda_melanoleuca
ENSFALG00000003728	HTATSF1	88	63.636	ENSACIG00000020459	htatsf1	99	59.110	Amphilophus_citrinellus
ENSFALG00000003728	HTATSF1	99	57.849	ENSAOCG00000020994	htatsf1	99	58.280	Amphiprion_ocellaris
ENSFALG00000003728	HTATSF1	99	58.442	ENSAPEG00000016432	htatsf1	99	58.442	Amphiprion_percula
ENSFALG00000003728	HTATSF1	87	62.808	ENSATEG00000008903	htatsf1	85	65.365	Anabas_testudineus
ENSFALG00000003728	HTATSF1	91	92.252	ENSAPLG00000012401	HTATSF1	100	92.252	Anas_platyrhynchos
ENSFALG00000003728	HTATSF1	85	70.103	ENSACAG00000009346	HTATSF1	98	69.773	Anolis_carolinensis
ENSFALG00000003728	HTATSF1	88	63.680	ENSACLG00000008096	htatsf1	86	66.412	Astatotilapia_calliptera
ENSFALG00000003728	HTATSF1	99	61.814	ENSAMXG00000008387	htatsf1	100	62.500	Astyanax_mexicanus
ENSFALG00000003728	HTATSF1	73	37.463	WBGene00022025	Y65B4A.1	77	36.975	Caenorhabditis_elegans
ENSFALG00000003728	HTATSF1	87	68.434	ENSCJAG00000003676	HTATSF1	51	68.912	Callithrix_jacchus
ENSFALG00000003728	HTATSF1	87	67.901	ENSCAFG00000023294	HTATSF1	51	68.687	Canis_familiaris
ENSFALG00000003728	HTATSF1	87	67.901	ENSCAFG00020024635	HTATSF1	50	68.687	Canis_lupus_dingo
ENSFALG00000003728	HTATSF1	91	65.783	ENSCHIG00000000312	HTATSF1	51	68.687	Capra_hircus
ENSFALG00000003728	HTATSF1	87	67.079	ENSTSYG00000028876	HTATSF1	51	68.101	Carlito_syrichta
ENSFALG00000003728	HTATSF1	87	67.424	ENSCCAG00000022701	-	51	67.876	Cebus_capucinus
ENSFALG00000003728	HTATSF1	79	67.409	ENSCCAG00000025329	-	54	68.435	Cebus_capucinus
ENSFALG00000003728	HTATSF1	87	67.830	ENSCATG00000029963	HTATSF1	51	67.857	Cercocebus_atys
ENSFALG00000003728	HTATSF1	87	67.830	ENSCSAG00000007505	HTATSF1	51	67.857	Chlorocebus_sabaeus
ENSFALG00000003728	HTATSF1	99	79.823	ENSCPBG00000026092	HTATSF1	99	79.823	Chrysemys_picta_bellii
ENSFALG00000003728	HTATSF1	87	45.730	ENSCING00000005914	-	68	46.377	Ciona_intestinalis
ENSFALG00000003728	HTATSF1	84	42.927	ENSCSAVG00000000371	-	82	44.974	Ciona_savignyi
ENSFALG00000003728	HTATSF1	87	67.830	ENSCANG00000028495	HTATSF1	51	67.857	Colobus_angolensis_palliatus
ENSFALG00000003728	HTATSF1	84	65.657	ENSCVAG00000014070	htatsf1	98	60.087	Cyprinodon_variegatus
ENSFALG00000003728	HTATSF1	99	60.691	ENSDARG00000056649	htatsf1	99	60.944	Danio_rerio
ENSFALG00000003728	HTATSF1	80	43.850	FBgn0037081	barc	63	45.584	Drosophila_melanogaster
ENSFALG00000003728	HTATSF1	85	53.580	ENSEBUG00000001534	htatsf1	77	55.673	Eptatretus_burgeri
ENSFALG00000003728	HTATSF1	83	64.362	ENSELUG00000005486	htatsf1	74	66.048	Esox_lucius
ENSFALG00000003728	HTATSF1	87	67.742	ENSFCAG00000031924	HTATSF1	51	68.528	Felis_catus
ENSFALG00000003728	HTATSF1	99	60.345	ENSFHEG00000020286	htatsf1	99	60.345	Fundulus_heteroclitus
ENSFALG00000003728	HTATSF1	79	65.181	ENSGMOG00000016444	htatsf1	99	65.181	Gadus_morhua
ENSFALG00000003728	HTATSF1	100	89.404	ENSGALG00000006410	HTATSF1	100	89.404	Gallus_gallus
ENSFALG00000003728	HTATSF1	99	60.173	ENSGAFG00000003041	htatsf1	98	60.173	Gambusia_affinis
ENSFALG00000003728	HTATSF1	99	58.425	ENSGACG00000020459	htatsf1	99	58.425	Gasterosteus_aculeatus
ENSFALG00000003728	HTATSF1	87	66.917	ENSGGOG00000026072	HTATSF1	51	66.923	Gorilla_gorilla
ENSFALG00000003728	HTATSF1	88	63.923	ENSHBUG00000004392	htatsf1	86	66.667	Haplochromis_burtoni
ENSFALG00000003728	HTATSF1	87	67.168	ENSHGLG00000005328	HTATSF1	51	67.436	Heterocephalus_glaber_female
ENSFALG00000003728	HTATSF1	99	58.297	ENSHCOG00000009056	htatsf1	100	58.734	Hippocampus_comes
ENSFALG00000003728	HTATSF1	85	66.839	ENSIPUG00000017828	htatsf1	100	59.236	Ictalurus_punctatus
ENSFALG00000003728	HTATSF1	87	66.667	ENSSTOG00000012505	HTATSF1	52	67.424	Ictidomys_tridecemlineatus
ENSFALG00000003728	HTATSF1	99	60.430	ENSKMAG00000007622	htatsf1	99	60.430	Kryptolebias_marmoratus
ENSFALG00000003728	HTATSF1	99	59.611	ENSLBEG00000001154	htatsf1	99	59.395	Labrus_bergylta
ENSFALG00000003728	HTATSF1	100	63.956	ENSLACG00000015989	HTATSF1	99	63.956	Latimeria_chalumnae
ENSFALG00000003728	HTATSF1	98	43.763	ENSLOCG00000015118	htatsf1	99	42.292	Lepisosteus_oculatus
ENSFALG00000003728	HTATSF1	87	66.995	ENSLAFG00000014307	HTATSF1	56	67.430	Loxodonta_africana
ENSFALG00000003728	HTATSF1	87	68.080	ENSMFAG00000044705	HTATSF1	51	68.112	Macaca_fascicularis
ENSFALG00000003728	HTATSF1	87	67.830	ENSMMUG00000006450	HTATSF1	51	67.857	Macaca_mulatta
ENSFALG00000003728	HTATSF1	87	67.830	ENSMNEG00000024084	HTATSF1	56	67.857	Macaca_nemestrina
ENSFALG00000003728	HTATSF1	87	67.830	ENSMLEG00000035511	HTATSF1	51	68.367	Mandrillus_leucophaeus
ENSFALG00000003728	HTATSF1	91	63.593	ENSMAMG00000021225	htatsf1	100	60.215	Mastacembelus_armatus
ENSFALG00000003728	HTATSF1	88	63.680	ENSMZEG00005000485	htatsf1	86	66.412	Maylandia_zebra
ENSFALG00000003728	HTATSF1	94	91.038	ENSMGAG00000003558	HTATSF1	99	91.038	Meleagris_gallopavo
ENSFALG00000003728	HTATSF1	87	67.662	ENSMAUG00000007235	Htatsf1	51	68.193	Mesocricetus_auratus
ENSFALG00000003728	HTATSF1	85	66.838	ENSMICG00000009348	HTATSF1	51	66.838	Microcebus_murinus
ENSFALG00000003728	HTATSF1	87	67.160	ENSMOCG00000023007	-	51	67.677	Microtus_ochrogaster
ENSFALG00000003728	HTATSF1	87	66.501	ENSMOCG00000022370	-	50	66.751	Microtus_ochrogaster
ENSFALG00000003728	HTATSF1	99	58.658	ENSMMOG00000011013	htatsf1	99	58.658	Mola_mola
ENSFALG00000003728	HTATSF1	99	71.806	ENSMODG00000014087	-	97	71.806	Monodelphis_domestica
ENSFALG00000003728	HTATSF1	54	73.200	ENSMODG00000000199	-	91	70.386	Monodelphis_domestica
ENSFALG00000003728	HTATSF1	99	59.041	ENSMALG00000019977	htatsf1	99	58.369	Monopterus_albus
ENSFALG00000003728	HTATSF1	87	66.750	MGP_CAROLIEiJ_G0033094	Htatsf1	51	67.519	Mus_caroli
ENSFALG00000003728	HTATSF1	87	66.005	ENSMUSG00000067873	Htatsf1	51	66.751	Mus_musculus
ENSFALG00000003728	HTATSF1	87	66.005	MGP_SPRETEiJ_G0034249	Htatsf1	51	66.751	Mus_spretus
ENSFALG00000003728	HTATSF1	87	68.317	ENSMPUG00000001901	HTATSF1	50	69.114	Mustela_putorius_furo
ENSFALG00000003728	HTATSF1	87	68.408	ENSNGAG00000017831	Htatsf1	52	69.211	Nannospalax_galili
ENSFALG00000003728	HTATSF1	88	63.923	ENSNBRG00000003818	htatsf1	87	65.586	Neolamprologus_brichardi
ENSFALG00000003728	HTATSF1	87	67.669	ENSNLEG00000002746	HTATSF1	51	67.949	Nomascus_leucogenys
ENSFALG00000003728	HTATSF1	87	73.500	ENSMEUG00000004133	-	89	76.127	Notamacropus_eugenii
ENSFALG00000003728	HTATSF1	99	59.570	ENSONIG00000008638	htatsf1	99	59.957	Oreochromis_niloticus
ENSFALG00000003728	HTATSF1	91	76.399	ENSOANG00000011674	-	99	76.399	Ornithorhynchus_anatinus
ENSFALG00000003728	HTATSF1	87	66.667	ENSOCUG00000012570	HTATSF1	50	67.430	Oryctolagus_cuniculus
ENSFALG00000003728	HTATSF1	99	60.349	ENSORLG00000002356	htatsf1	99	60.349	Oryzias_latipes
ENSFALG00000003728	HTATSF1	99	60.262	ENSORLG00020017818	htatsf1	95	60.262	Oryzias_latipes_hni
ENSFALG00000003728	HTATSF1	99	59.825	ENSORLG00015002268	htatsf1	99	59.565	Oryzias_latipes_hsok
ENSFALG00000003728	HTATSF1	99	60.262	ENSOMEG00000007564	htatsf1	99	60.262	Oryzias_melastigma
ENSFALG00000003728	HTATSF1	87	66.917	ENSPPAG00000024268	HTATSF1	51	66.923	Pan_paniscus
ENSFALG00000003728	HTATSF1	87	67.990	ENSPPRG00000014209	HTATSF1	51	68.782	Panthera_pardus
ENSFALG00000003728	HTATSF1	87	66.917	ENSPTRG00000044591	HTATSF1	51	66.923	Pan_troglodytes
ENSFALG00000003728	HTATSF1	99	61.099	ENSPKIG00000024852	htatsf1	83	67.801	Paramormyrops_kingsleyae
ENSFALG00000003728	HTATSF1	78	82.386	ENSPSIG00000010192	HTATSF1	99	82.386	Pelodiscus_sinensis
ENSFALG00000003728	HTATSF1	99	59.957	ENSPMGG00000006172	htatsf1	99	59.740	Periophthalmus_magnuspinnatus
ENSFALG00000003728	HTATSF1	87	67.164	ENSPEMG00000022397	Htatsf1	50	68.380	Peromyscus_maniculatus_bairdii
ENSFALG00000003728	HTATSF1	92	71.395	ENSPCIG00000030173	-	86	75.462	Phascolarctos_cinereus
ENSFALG00000003728	HTATSF1	99	66.219	ENSPCIG00000018896	-	98	66.219	Phascolarctos_cinereus
ENSFALG00000003728	HTATSF1	99	60.823	ENSPFOG00000007871	htatsf1	96	61.039	Poecilia_formosa
ENSFALG00000003728	HTATSF1	99	59.957	ENSPLAG00000007532	htatsf1	99	59.957	Poecilia_latipinna
ENSFALG00000003728	HTATSF1	99	61.638	ENSPMEG00000000352	htatsf1	99	61.853	Poecilia_mexicana
ENSFALG00000003728	HTATSF1	99	61.638	ENSPREG00000007811	htatsf1	99	61.638	Poecilia_reticulata
ENSFALG00000003728	HTATSF1	87	67.168	ENSPPYG00000020765	HTATSF1	51	67.179	Pongo_abelii
ENSFALG00000003728	HTATSF1	87	66.832	ENSPCOG00000021823	HTATSF1	50	68.380	Propithecus_coquereli
ENSFALG00000003728	HTATSF1	88	63.680	ENSPNYG00000016693	htatsf1	86	66.412	Pundamilia_nyererei
ENSFALG00000003728	HTATSF1	99	60.619	ENSPNAG00000006166	htatsf1	100	61.504	Pygocentrus_nattereri
ENSFALG00000003728	HTATSF1	87	67.830	ENSRROG00000021939	HTATSF1	51	67.857	Rhinopithecus_roxellana
ENSFALG00000003728	HTATSF1	51	32.099	YNL286W	-	80	31.799	Saccharomyces_cerevisiae
ENSFALG00000003728	HTATSF1	87	67.677	ENSSBOG00000027186	-	51	68.135	Saimiri_boliviensis_boliviensis
ENSFALG00000003728	HTATSF1	98	69.933	ENSSHAG00000018908	-	93	70.046	Sarcophilus_harrisii
ENSFALG00000003728	HTATSF1	86	72.292	ENSSHAG00000006440	-	91	76.816	Sarcophilus_harrisii
ENSFALG00000003728	HTATSF1	87	65.915	ENSSFOG00015012002	htatsf1	80	67.810	Scleropages_formosus
ENSFALG00000003728	HTATSF1	83	67.013	ENSSMAG00000002970	htatsf1	83	67.013	Scophthalmus_maximus
ENSFALG00000003728	HTATSF1	80	63.733	ENSSDUG00000020002	htatsf1	87	63.073	Seriola_dumerili
ENSFALG00000003728	HTATSF1	99	59.002	ENSSLDG00000016880	htatsf1	99	59.002	Seriola_lalandi_dorsalis
ENSFALG00000003728	HTATSF1	99	73.614	ENSSPUG00000014767	HTATSF1	98	73.614	Sphenodon_punctatus
ENSFALG00000003728	HTATSF1	99	57.143	ENSSPAG00000000732	htatsf1	99	57.143	Stegastes_partitus
ENSFALG00000003728	HTATSF1	85	69.133	ENSSSCG00000023062	HTATSF1	50	72.753	Sus_scrofa
ENSFALG00000003728	HTATSF1	100	94.923	ENSTGUG00000002099	HTATSF1	100	94.923	Taeniopygia_guttata
ENSFALG00000003728	HTATSF1	84	66.244	ENSTRUG00000013383	htatsf1	99	59.827	Takifugu_rubripes
ENSFALG00000003728	HTATSF1	99	60.262	ENSTNIG00000016140	htatsf1	86	66.839	Tetraodon_nigroviridis
ENSFALG00000003728	HTATSF1	77	68.661	ENSTTRG00000002269	HTATSF1	54	71.386	Tursiops_truncatus
ENSFALG00000003728	HTATSF1	87	67.990	ENSUAMG00000012048	HTATSF1	51	68.193	Ursus_americanus
ENSFALG00000003728	HTATSF1	87	67.990	ENSUMAG00000010393	HTATSF1	50	68.193	Ursus_maritimus
ENSFALG00000003728	HTATSF1	87	67.574	ENSVVUG00000024802	HTATSF1	50	68.434	Vulpes_vulpes
ENSFALG00000003728	HTATSF1	98	64.667	ENSXETG00000019749	htatsf1	84	63.478	Xenopus_tropicalis
ENSFALG00000003728	HTATSF1	92	64.029	ENSXCOG00000006912	htatsf1	93	63.571	Xiphophorus_couchianus
ENSFALG00000003728	HTATSF1	99	62.281	ENSXMAG00000000490	htatsf1	99	62.281	Xiphophorus_maculatus