EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003756 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 5527 bases
Position: chrJH603249.1:3626302-3631828
Accession: 101806845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003919	zf-U1	PF06220.12	6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003936	SNRPC-201	1887	-	ENSFALP00000003919	159 (aa)	XP_005059525	U3JMB5

Gene Model

Click here to download ENSFALG00000003756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003756's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003756	SNRPC	100	98.742	ENSG00000124562	SNRPC	100	98.742	Homo_sapiens
ENSFALG00000003756	SNRPC	100	96.855	ENSAMEG00000000963	SNRPC	88	96.855	Ailuropoda_melanoleuca
ENSFALG00000003756	SNRPC	99	96.815	ENSACAG00000015721	SNRPC	87	96.815	Anolis_carolinensis
ENSFALG00000003756	SNRPC	100	94.340	ENSANAG00000019157	-	100	94.340	Aotus_nancymaae
ENSFALG00000003756	SNRPC	100	98.113	ENSANAG00000007843	-	100	98.113	Aotus_nancymaae
ENSFALG00000003756	SNRPC	100	98.742	ENSANAG00000019696	-	100	98.742	Aotus_nancymaae
ENSFALG00000003756	SNRPC	100	88.050	ENSANAG00000019726	-	92	88.679	Aotus_nancymaae
ENSFALG00000003756	SNRPC	100	74.843	ENSANAG00000021444	-	61	82.292	Aotus_nancymaae
ENSFALG00000003756	SNRPC	99	90.506	ENSANAG00000020588	-	92	90.506	Aotus_nancymaae
ENSFALG00000003756	SNRPC	100	86.164	ENSANAG00000021026	-	100	79.245	Aotus_nancymaae
ENSFALG00000003756	SNRPC	100	84.906	ENSAMXG00000032641	snrpc	87	84.906	Astyanax_mexicanus
ENSFALG00000003756	SNRPC	100	98.742	ENSBTAG00000024549	SNRPC	100	98.742	Bos_taurus
ENSFALG00000003756	SNRPC	100	98.742	ENSCJAG00000015321	-	100	98.742	Callithrix_jacchus
ENSFALG00000003756	SNRPC	100	97.484	ENSCJAG00000043055	-	100	97.484	Callithrix_jacchus
ENSFALG00000003756	SNRPC	100	96.226	ENSCJAG00000041822	-	100	96.226	Callithrix_jacchus
ENSFALG00000003756	SNRPC	100	94.340	ENSCAFG00000031775	-	100	94.340	Canis_familiaris
ENSFALG00000003756	SNRPC	100	77.987	ENSCAFG00000025525	-	100	77.987	Canis_familiaris
ENSFALG00000003756	SNRPC	100	96.250	ENSCAFG00000028988	-	100	96.250	Canis_familiaris
ENSFALG00000003756	SNRPC	74	99.153	ENSCAFG00000001231	-	93	99.153	Canis_familiaris
ENSFALG00000003756	SNRPC	100	77.528	ENSCAFG00020026577	-	100	83.708	Canis_lupus_dingo
ENSFALG00000003756	SNRPC	100	94.340	ENSCAFG00020017383	-	100	94.340	Canis_lupus_dingo
ENSFALG00000003756	SNRPC	99	87.261	ENSCAFG00020009944	-	90	87.261	Canis_lupus_dingo
ENSFALG00000003756	SNRPC	100	98.742	ENSCAFG00020005945	-	100	98.742	Canis_lupus_dingo
ENSFALG00000003756	SNRPC	100	94.969	ENSCAFG00020005758	-	99	95.541	Canis_lupus_dingo
ENSFALG00000003756	SNRPC	100	72.327	ENSCHIG00000005039	-	100	71.069	Capra_hircus
ENSFALG00000003756	SNRPC	100	98.113	ENSCHIG00000012087	-	100	98.113	Capra_hircus
ENSFALG00000003756	SNRPC	100	82.390	ENSTSYG00000025721	-	100	75.472	Carlito_syrichta
ENSFALG00000003756	SNRPC	99	87.975	ENSTSYG00000029745	-	62	93.496	Carlito_syrichta
ENSFALG00000003756	SNRPC	100	98.742	ENSTSYG00000011216	-	100	98.742	Carlito_syrichta
ENSFALG00000003756	SNRPC	89	98.592	ENSCAPG00000005161	SNRPC	100	98.592	Cavia_aperea
ENSFALG00000003756	SNRPC	100	98.742	ENSCPOG00000008563	SNRPC	100	98.742	Cavia_porcellus
ENSFALG00000003756	SNRPC	100	68.553	ENSCCAG00000028293	-	58	89.474	Cebus_capucinus
ENSFALG00000003756	SNRPC	100	93.082	ENSCCAG00000036059	-	89	93.082	Cebus_capucinus
ENSFALG00000003756	SNRPC	98	78.846	ENSCCAG00000022209	-	95	78.846	Cebus_capucinus
ENSFALG00000003756	SNRPC	98	90.385	ENSCCAG00000022751	-	95	90.385	Cebus_capucinus
ENSFALG00000003756	SNRPC	99	80.255	ENSCCAG00000026624	-	66	74.522	Cebus_capucinus
ENSFALG00000003756	SNRPC	100	98.742	ENSCATG00000035787	SNRPC	100	98.742	Cercocebus_atys
ENSFALG00000003756	SNRPC	100	98.742	ENSCLAG00000016920	SNRPC	100	98.742	Chinchilla_lanigera
ENSFALG00000003756	SNRPC	99	80.255	ENSCLAG00000010242	-	96	80.255	Chinchilla_lanigera
ENSFALG00000003756	SNRPC	100	78.090	ENSCSAG00000009821	SNRPC	100	84.270	Chlorocebus_sabaeus
ENSFALG00000003756	SNRPC	100	80.503	ENSCHOG00000011439	SNRPC	88	81.529	Choloepus_hoffmanni
ENSFALG00000003756	SNRPC	100	98.113	ENSCPBG00000027142	SNRPC	100	98.113	Chrysemys_picta_bellii
ENSFALG00000003756	SNRPC	97	49.351	ENSCING00000021229	ci-zf(matrin)-4	51	85.484	Ciona_intestinalis
ENSFALG00000003756	SNRPC	100	98.742	ENSCANG00000028035	SNRPC	100	98.742	Colobus_angolensis_palliatus
ENSFALG00000003756	SNRPC	100	86.164	ENSCGRG00001021483	-	100	84.277	Cricetulus_griseus_chok1gshd
ENSFALG00000003756	SNRPC	100	98.113	ENSCGRG00001009011	-	100	98.113	Cricetulus_griseus_chok1gshd
ENSFALG00000003756	SNRPC	100	96.226	ENSCGRG00000005005	Snrpc	100	96.226	Cricetulus_griseus_crigri
ENSFALG00000003756	SNRPC	100	84.906	ENSDARG00000009871	snrpc	100	84.906	Danio_rerio
ENSFALG00000003756	SNRPC	75	98.319	ENSDNOG00000042403	-	94	98.319	Dasypus_novemcinctus
ENSFALG00000003756	SNRPC	100	97.484	ENSDNOG00000034699	-	99	97.484	Dasypus_novemcinctus
ENSFALG00000003756	SNRPC	95	78.146	ENSDORG00000029823	-	55	96.053	Dipodomys_ordii
ENSFALG00000003756	SNRPC	100	79.874	ENSDORG00000005955	Snrpc	66	78.981	Dipodomys_ordii
ENSFALG00000003756	SNRPC	52	93.976	ENSETEG00000008756	-	75	94.737	Echinops_telfairi
ENSFALG00000003756	SNRPC	98	94.872	ENSETEG00000008268	-	100	94.872	Echinops_telfairi
ENSFALG00000003756	SNRPC	98	91.026	ENSETEG00000011265	-	100	91.026	Echinops_telfairi
ENSFALG00000003756	SNRPC	100	98.742	ENSEASG00005021007	SNRPC	100	98.742	Equus_asinus_asinus
ENSFALG00000003756	SNRPC	100	98.742	ENSECAG00000026848	SNRPC	100	98.742	Equus_caballus
ENSFALG00000003756	SNRPC	99	79.114	ENSEEUG00000014633	SNRPC	90	79.114	Erinaceus_europaeus
ENSFALG00000003756	SNRPC	100	91.824	ENSFCAG00000031775	-	88	91.824	Felis_catus
ENSFALG00000003756	SNRPC	100	98.742	ENSFCAG00000044077	-	100	98.742	Felis_catus
ENSFALG00000003756	SNRPC	100	98.742	ENSFDAG00000018111	SNRPC	100	98.742	Fukomys_damarensis
ENSFALG00000003756	SNRPC	100	98.125	ENSGALG00000002773	SNRPC	100	98.125	Gallus_gallus
ENSFALG00000003756	SNRPC	100	98.113	ENSGAGG00000003063	SNRPC	100	98.113	Gopherus_agassizii
ENSFALG00000003756	SNRPC	100	98.742	ENSGGOG00000012499	SNRPC	100	98.742	Gorilla_gorilla
ENSFALG00000003756	SNRPC	100	80.503	ENSHGLG00000017741	-	100	77.987	Heterocephalus_glaber_female
ENSFALG00000003756	SNRPC	100	98.742	ENSHGLG00000013981	SNRPC	100	98.742	Heterocephalus_glaber_female
ENSFALG00000003756	SNRPC	81	74.419	ENSHGLG00000005871	-	100	74.214	Heterocephalus_glaber_female
ENSFALG00000003756	SNRPC	100	80.503	ENSHGLG00100010786	-	100	77.987	Heterocephalus_glaber_male
ENSFALG00000003756	SNRPC	100	93.711	ENSHGLG00100017764	-	100	93.711	Heterocephalus_glaber_male
ENSFALG00000003756	SNRPC	100	98.742	ENSHGLG00100009478	SNRPC	100	98.742	Heterocephalus_glaber_male
ENSFALG00000003756	SNRPC	100	85.535	ENSIPUG00000024851	snrpc	100	85.535	Ictalurus_punctatus
ENSFALG00000003756	SNRPC	100	98.742	ENSSTOG00000013786	SNRPC	100	98.742	Ictidomys_tridecemlineatus
ENSFALG00000003756	SNRPC	100	98.113	ENSJJAG00000021741	Snrpc	100	98.113	Jaculus_jaculus
ENSFALG00000003756	SNRPC	100	86.875	ENSLACG00000013753	SNRPC	88	89.873	Latimeria_chalumnae
ENSFALG00000003756	SNRPC	100	98.742	ENSLAFG00000013534	SNRPC	100	98.742	Loxodonta_africana
ENSFALG00000003756	SNRPC	100	98.113	ENSMFAG00000030525	-	100	98.113	Macaca_fascicularis
ENSFALG00000003756	SNRPC	100	98.742	ENSMFAG00000031764	-	100	98.742	Macaca_fascicularis
ENSFALG00000003756	SNRPC	100	97.484	ENSMMUG00000039415	-	100	97.484	Macaca_mulatta
ENSFALG00000003756	SNRPC	100	97.484	ENSMMUG00000000869	-	97	97.484	Macaca_mulatta
ENSFALG00000003756	SNRPC	100	88.679	ENSMMUG00000045425	-	100	88.679	Macaca_mulatta
ENSFALG00000003756	SNRPC	100	98.742	ENSMNEG00000032731	SNRPC	100	98.742	Macaca_nemestrina
ENSFALG00000003756	SNRPC	100	98.742	ENSMLEG00000033916	-	100	98.742	Mandrillus_leucophaeus
ENSFALG00000003756	SNRPC	97	90.323	ENSMLEG00000040224	-	89	90.323	Mandrillus_leucophaeus
ENSFALG00000003756	SNRPC	100	98.113	ENSMGAG00000006054	SNRPC	100	98.113	Meleagris_gallopavo
ENSFALG00000003756	SNRPC	100	83.648	ENSMICG00000036552	-	87	78.846	Microcebus_murinus
ENSFALG00000003756	SNRPC	100	98.113	ENSMICG00000032183	-	100	98.113	Microcebus_murinus
ENSFALG00000003756	SNRPC	100	86.792	ENSMICG00000009130	-	100	87.421	Microcebus_murinus
ENSFALG00000003756	SNRPC	100	98.113	ENSMICG00000007339	-	100	98.113	Microcebus_murinus
ENSFALG00000003756	SNRPC	100	98.113	ENSMOCG00000017609	Snrpc	100	98.113	Microtus_ochrogaster
ENSFALG00000003756	SNRPC	100	97.484	ENSMODG00000013904	-	100	97.484	Monodelphis_domestica
ENSFALG00000003756	SNRPC	100	98.113	MGP_CAROLIEiJ_G0021308	Snrpc	100	98.113	Mus_caroli
ENSFALG00000003756	SNRPC	100	98.113	ENSMUSG00000024217	Snrpc	100	98.113	Mus_musculus
ENSFALG00000003756	SNRPC	74	98.305	MGP_SPRETEiJ_G0022221	-	98	98.305	Mus_spretus
ENSFALG00000003756	SNRPC	100	96.855	ENSMPUG00000003210	SNRPC	100	96.855	Mustela_putorius_furo
ENSFALG00000003756	SNRPC	100	96.855	ENSMLUG00000002488	SNRPC	100	96.855	Myotis_lucifugus
ENSFALG00000003756	SNRPC	100	98.113	ENSNGAG00000019686	Snrpc	100	98.113	Nannospalax_galili
ENSFALG00000003756	SNRPC	100	98.742	ENSNLEG00000034810	SNRPC	100	98.742	Nomascus_leucogenys
ENSFALG00000003756	SNRPC	89	97.887	ENSMEUG00000009300	SNRPC	100	97.887	Notamacropus_eugenii
ENSFALG00000003756	SNRPC	100	97.484	ENSODEG00000019633	-	100	97.484	Octodon_degus
ENSFALG00000003756	SNRPC	100	98.742	ENSODEG00000020370	-	100	98.742	Octodon_degus
ENSFALG00000003756	SNRPC	100	98.742	ENSODEG00000018985	-	100	98.742	Octodon_degus
ENSFALG00000003756	SNRPC	100	98.742	ENSODEG00000017080	-	100	98.742	Octodon_degus
ENSFALG00000003756	SNRPC	100	98.113	ENSODEG00000020201	-	100	98.113	Octodon_degus
ENSFALG00000003756	SNRPC	77	93.496	ENSODEG00000006008	-	88	93.496	Octodon_degus
ENSFALG00000003756	SNRPC	91	93.919	ENSOANG00000003405	SNRPC	100	93.919	Ornithorhynchus_anatinus
ENSFALG00000003756	SNRPC	100	97.484	ENSOCUG00000026430	-	99	97.484	Oryctolagus_cuniculus
ENSFALG00000003756	SNRPC	100	98.742	ENSOCUG00000026668	-	100	98.742	Oryctolagus_cuniculus
ENSFALG00000003756	SNRPC	100	96.226	ENSOCUG00000023292	-	100	96.226	Oryctolagus_cuniculus
ENSFALG00000003756	SNRPC	97	83.766	ENSOGAG00000028405	-	99	81.169	Otolemur_garnettii
ENSFALG00000003756	SNRPC	99	98.089	ENSOGAG00000008755	-	88	98.089	Otolemur_garnettii
ENSFALG00000003756	SNRPC	100	96.855	ENSOGAG00000026269	-	100	96.855	Otolemur_garnettii
ENSFALG00000003756	SNRPC	100	98.742	ENSOARG00000010823	SNRPC	100	98.742	Ovis_aries
ENSFALG00000003756	SNRPC	100	98.742	ENSPPAG00000043871	SNRPC	100	98.742	Pan_paniscus
ENSFALG00000003756	SNRPC	100	98.742	ENSPPRG00000008647	-	100	98.742	Panthera_pardus
ENSFALG00000003756	SNRPC	96	59.091	ENSPPRG00000016017	-	86	53.595	Panthera_pardus
ENSFALG00000003756	SNRPC	100	98.742	ENSPTIG00000021867	-	100	98.742	Panthera_tigris_altaica
ENSFALG00000003756	SNRPC	100	98.742	ENSPTRG00000018070	SNRPC	100	98.742	Pan_troglodytes
ENSFALG00000003756	SNRPC	100	87.421	ENSPANG00000018228	-	94	87.421	Papio_anubis
ENSFALG00000003756	SNRPC	100	98.742	ENSPANG00000022802	-	100	98.742	Papio_anubis
ENSFALG00000003756	SNRPC	99	96.815	ENSPSIG00000004876	SNRPC	77	96.815	Pelodiscus_sinensis
ENSFALG00000003756	SNRPC	100	98.113	ENSPEMG00000010773	Snrpc	100	98.113	Peromyscus_maniculatus_bairdii
ENSFALG00000003756	SNRPC	100	86.164	ENSPEMG00000002763	-	100	84.277	Peromyscus_maniculatus_bairdii
ENSFALG00000003756	SNRPC	52	98.795	ENSPPYG00000029902	-	84	98.795	Pongo_abelii
ENSFALG00000003756	SNRPC	99	98.089	ENSPCAG00000016885	SNRPC	90	98.089	Procavia_capensis
ENSFALG00000003756	SNRPC	100	98.742	ENSPCOG00000004904	SNRPC	100	98.742	Propithecus_coquereli
ENSFALG00000003756	SNRPC	99	97.452	ENSPVAG00000015597	SNRPC	87	97.452	Pteropus_vampyrus
ENSFALG00000003756	SNRPC	100	98.113	ENSRNOG00000000493	Snrpc	100	98.113	Rattus_norvegicus
ENSFALG00000003756	SNRPC	100	88.050	ENSRBIG00000036353	-	83	88.050	Rhinopithecus_bieti
ENSFALG00000003756	SNRPC	100	98.742	ENSRBIG00000037567	-	100	98.742	Rhinopithecus_bieti
ENSFALG00000003756	SNRPC	100	98.113	ENSRBIG00000022998	-	100	98.113	Rhinopithecus_bieti
ENSFALG00000003756	SNRPC	100	98.113	ENSRBIG00000014819	-	100	98.113	Rhinopithecus_bieti
ENSFALG00000003756	SNRPC	100	98.742	ENSRROG00000041300	SNRPC	100	98.742	Rhinopithecus_roxellana
ENSFALG00000003756	SNRPC	100	98.742	ENSSBOG00000031528	-	100	98.742	Saimiri_boliviensis_boliviensis
ENSFALG00000003756	SNRPC	98	80.128	ENSSBOG00000032882	-	93	80.128	Saimiri_boliviensis_boliviensis
ENSFALG00000003756	SNRPC	98	81.410	ENSSBOG00000023189	-	91	81.410	Saimiri_boliviensis_boliviensis
ENSFALG00000003756	SNRPC	95	81.457	ENSSBOG00000032361	-	75	82.787	Saimiri_boliviensis_boliviensis
ENSFALG00000003756	SNRPC	99	97.452	ENSSHAG00000000945	-	87	97.452	Sarcophilus_harrisii
ENSFALG00000003756	SNRPC	100	74.843	ENSSARG00000008970	SNRPC	89	74.843	Sorex_araneus
ENSFALG00000003756	SNRPC	100	98.113	ENSSPUG00000002502	SNRPC	100	98.113	Sphenodon_punctatus
ENSFALG00000003756	SNRPC	100	98.742	ENSSSCG00000001531	SNRPC	100	98.742	Sus_scrofa
ENSFALG00000003756	SNRPC	100	98.742	ENSTGUG00000001773	SNRPC	100	98.742	Taeniopygia_guttata
ENSFALG00000003756	SNRPC	98	91.026	ENSTBEG00000013022	-	100	91.026	Tupaia_belangeri
ENSFALG00000003756	SNRPC	98	72.436	ENSTBEG00000015356	-	68	90.625	Tupaia_belangeri
ENSFALG00000003756	SNRPC	89	71.831	ENSTBEG00000016759	-	79	71.831	Tupaia_belangeri
ENSFALG00000003756	SNRPC	100	96.855	ENSTTRG00000007827	SNRPC	87	96.855	Tursiops_truncatus
ENSFALG00000003756	SNRPC	75	98.319	ENSUAMG00000014125	SNRPC	80	98.319	Ursus_americanus
ENSFALG00000003756	SNRPC	100	88.202	ENSUMAG00000010869	SNRPC	100	88.202	Ursus_maritimus
ENSFALG00000003756	SNRPC	89	73.239	ENSVPAG00000003106	SNRPC	79	73.239	Vicugna_pacos
ENSFALG00000003756	SNRPC	100	97.484	ENSVVUG00000021947	-	100	97.484	Vulpes_vulpes
ENSFALG00000003756	SNRPC	97	93.506	ENSVVUG00000010467	-	87	93.590	Vulpes_vulpes
ENSFALG00000003756	SNRPC	100	89.937	ENSXETG00000024721	snrpc	100	89.937	Xenopus_tropicalis