EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000003757 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 43737 bases
Position: chrJH603203.1:1212085-1255821
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003916	Ago_hook	PF10427.9	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000003933	TNRC6A-201	10239	-	ENSFALP00000003916	1941 (aa)	-	U3JMB2

Gene Model

Click here to download ENSFALG00000003757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000003757	TNRC6A	84	44.146	ENSFALG00000000848	TNRC6C	99	44.029
ENSFALG00000003757	TNRC6A	93	37.566	ENSFALG00000012195	TNRC6B	99	37.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003757	TNRC6A	99	79.829	ENSG00000090905	TNRC6A	100	92.547	Homo_sapiens
ENSFALG00000003757	TNRC6A	97	79.835	ENSAMEG00000009333	TNRC6A	99	79.917	Ailuropoda_melanoleuca
ENSFALG00000003757	TNRC6A	97	92.989	ENSAPLG00000009978	TNRC6A	100	92.884	Anas_platyrhynchos
ENSFALG00000003757	TNRC6A	99	57.185	ENSACAG00000011857	TNRC6A	99	58.648	Anolis_carolinensis
ENSFALG00000003757	TNRC6A	99	79.576	ENSANAG00000025252	TNRC6A	99	78.579	Aotus_nancymaae
ENSFALG00000003757	TNRC6A	91	57.815	ENSAMXG00000019919	tnrc6a	100	57.669	Astyanax_mexicanus
ENSFALG00000003757	TNRC6A	97	80.052	ENSBTAG00000017999	TNRC6A	99	79.283	Bos_taurus
ENSFALG00000003757	TNRC6A	99	79.188	ENSCJAG00000020677	TNRC6A	99	78.195	Callithrix_jacchus
ENSFALG00000003757	TNRC6A	99	80.050	ENSCAFG00000017531	TNRC6A	100	79.104	Canis_familiaris
ENSFALG00000003757	TNRC6A	97	78.738	ENSCAFG00020021160	TNRC6A	99	78.335	Canis_lupus_dingo
ENSFALG00000003757	TNRC6A	93	87.037	ENSCHIG00000019448	TNRC6A	97	78.592	Capra_hircus
ENSFALG00000003757	TNRC6A	99	79.688	ENSTSYG00000012711	TNRC6A	99	79.026	Carlito_syrichta
ENSFALG00000003757	TNRC6A	99	77.952	ENSCPOG00000036684	TNRC6A	100	76.900	Cavia_porcellus
ENSFALG00000003757	TNRC6A	99	79.748	ENSCCAG00000033664	TNRC6A	99	79.029	Cebus_capucinus
ENSFALG00000003757	TNRC6A	99	77.312	ENSCATG00000019284	TNRC6A	97	77.903	Cercocebus_atys
ENSFALG00000003757	TNRC6A	99	74.950	ENSCLAG00000010217	TNRC6A	99	74.106	Chinchilla_lanigera
ENSFALG00000003757	TNRC6A	99	79.859	ENSCSAG00000006561	TNRC6A	99	78.863	Chlorocebus_sabaeus
ENSFALG00000003757	TNRC6A	95	78.630	ENSCHOG00000009374	TNRC6A	95	78.102	Choloepus_hoffmanni
ENSFALG00000003757	TNRC6A	91	89.423	ENSCPBG00000001881	TNRC6A	100	89.480	Chrysemys_picta_bellii
ENSFALG00000003757	TNRC6A	99	79.990	ENSCANG00000041549	TNRC6A	99	78.992	Colobus_angolensis_palliatus
ENSFALG00000003757	TNRC6A	97	78.778	ENSCGRG00001015021	Tnrc6a	99	78.509	Cricetulus_griseus_chok1gshd
ENSFALG00000003757	TNRC6A	99	75.808	ENSCGRG00000013351	Tnrc6a	99	74.962	Cricetulus_griseus_crigri
ENSFALG00000003757	TNRC6A	91	59.401	ENSDARG00000079688	tnrc6a	100	59.640	Danio_rerio
ENSFALG00000003757	TNRC6A	97	79.095	ENSDNOG00000013989	TNRC6A	99	78.690	Dasypus_novemcinctus
ENSFALG00000003757	TNRC6A	97	72.095	ENSETEG00000014658	TNRC6A	99	71.954	Echinops_telfairi
ENSFALG00000003757	TNRC6A	93	87.037	ENSEASG00005017693	TNRC6A	97	81.475	Equus_asinus_asinus
ENSFALG00000003757	TNRC6A	93	87.037	ENSECAG00000025056	TNRC6A	97	81.475	Equus_caballus
ENSFALG00000003757	TNRC6A	97	74.227	ENSEEUG00000004530	TNRC6A	99	74.240	Erinaceus_europaeus
ENSFALG00000003757	TNRC6A	99	80.203	ENSFCAG00000025236	TNRC6A	99	79.255	Felis_catus
ENSFALG00000003757	TNRC6A	91	91.916	ENSGALG00000006068	TNRC6A	100	92.029	Gallus_gallus
ENSFALG00000003757	TNRC6A	91	88.557	ENSGAGG00000023209	TNRC6A	100	88.613	Gopherus_agassizii
ENSFALG00000003757	TNRC6A	99	79.716	ENSGGOG00000005137	TNRC6A	99	78.980	Gorilla_gorilla
ENSFALG00000003757	TNRC6A	95	61.497	ENSHGLG00000007368	-	93	60.989	Heterocephalus_glaber_female
ENSFALG00000003757	TNRC6A	99	75.887	ENSHGLG00000012474	-	100	74.937	Heterocephalus_glaber_female
ENSFALG00000003757	TNRC6A	99	76.558	ENSHGLG00100012496	-	100	75.549	Heterocephalus_glaber_male
ENSFALG00000003757	TNRC6A	99	79.899	ENSSTOG00000023394	TNRC6A	99	79.001	Ictidomys_tridecemlineatus
ENSFALG00000003757	TNRC6A	97	73.191	ENSLACG00000006277	TNRC6A	100	73.191	Latimeria_chalumnae
ENSFALG00000003757	TNRC6A	99	85.242	ENSLOCG00000005517	tnrc6a	93	85.242	Lepisosteus_oculatus
ENSFALG00000003757	TNRC6A	97	77.374	ENSLAFG00000004209	TNRC6A	99	77.518	Loxodonta_africana
ENSFALG00000003757	TNRC6A	97	78.491	ENSMFAG00000003824	TNRC6A	99	78.091	Macaca_fascicularis
ENSFALG00000003757	TNRC6A	99	79.990	ENSMMUG00000020428	TNRC6A	99	79.093	Macaca_mulatta
ENSFALG00000003757	TNRC6A	99	79.589	ENSMNEG00000034854	TNRC6A	99	78.485	Macaca_nemestrina
ENSFALG00000003757	TNRC6A	99	76.579	ENSMLEG00000042737	TNRC6A	97	77.755	Mandrillus_leucophaeus
ENSFALG00000003757	TNRC6A	99	89.588	ENSMGAG00000006455	TNRC6A	100	89.688	Meleagris_gallopavo
ENSFALG00000003757	TNRC6A	99	76.810	ENSMAUG00000012750	Tnrc6a	99	75.911	Mesocricetus_auratus
ENSFALG00000003757	TNRC6A	99	80.080	ENSMICG00000030685	TNRC6A	99	79.330	Microcebus_murinus
ENSFALG00000003757	TNRC6A	99	77.091	ENSMOCG00000000152	Tnrc6a	99	75.785	Microtus_ochrogaster
ENSFALG00000003757	TNRC6A	99	84.293	ENSMODG00000016348	TNRC6A	99	84.343	Monodelphis_domestica
ENSFALG00000003757	TNRC6A	99	76.703	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	81.294	Mus_caroli
ENSFALG00000003757	TNRC6A	99	77.040	ENSMUSG00000052707	Tnrc6a	99	81.650	Mus_musculus
ENSFALG00000003757	TNRC6A	99	76.711	MGP_PahariEiJ_G0013635	Tnrc6a	100	81.437	Mus_pahari
ENSFALG00000003757	TNRC6A	99	79.148	MGP_SPRETEiJ_G0031539	Tnrc6a	100	81.366	Mus_spretus
ENSFALG00000003757	TNRC6A	97	71.014	ENSMPUG00000012324	TNRC6A	100	70.908	Mustela_putorius_furo
ENSFALG00000003757	TNRC6A	97	78.148	ENSMLUG00000002701	TNRC6A	100	78.096	Myotis_lucifugus
ENSFALG00000003757	TNRC6A	99	77.289	ENSNGAG00000020702	Tnrc6a	100	76.138	Nannospalax_galili
ENSFALG00000003757	TNRC6A	97	77.634	ENSNLEG00000011851	TNRC6A	99	76.737	Nomascus_leucogenys
ENSFALG00000003757	TNRC6A	76	88.151	ENSMEUG00000015959	-	77	88.367	Notamacropus_eugenii
ENSFALG00000003757	TNRC6A	95	93.657	ENSOPRG00000005819	TNRC6A	96	93.657	Ochotona_princeps
ENSFALG00000003757	TNRC6A	99	74.373	ENSODEG00000012802	TNRC6A	97	74.413	Octodon_degus
ENSFALG00000003757	TNRC6A	87	85.414	ENSOANG00000007672	TNRC6A	100	84.947	Ornithorhynchus_anatinus
ENSFALG00000003757	TNRC6A	97	78.834	ENSOCUG00000004325	TNRC6A	100	78.373	Oryctolagus_cuniculus
ENSFALG00000003757	TNRC6A	99	80.193	ENSOGAG00000006666	TNRC6A	98	79.658	Otolemur_garnettii
ENSFALG00000003757	TNRC6A	99	79.036	ENSOARG00000017950	TNRC6A	98	78.930	Ovis_aries
ENSFALG00000003757	TNRC6A	99	79.618	ENSPPAG00000028379	TNRC6A	100	78.826	Pan_paniscus
ENSFALG00000003757	TNRC6A	99	79.808	ENSPPRG00000005861	TNRC6A	99	78.860	Panthera_pardus
ENSFALG00000003757	TNRC6A	99	79.427	ENSPTIG00000006346	TNRC6A	99	78.733	Panthera_tigris_altaica
ENSFALG00000003757	TNRC6A	97	79.239	ENSPTRG00000007898	TNRC6A	99	78.839	Pan_troglodytes
ENSFALG00000003757	TNRC6A	99	77.398	ENSPANG00000018523	TNRC6A	99	76.406	Papio_anubis
ENSFALG00000003757	TNRC6A	88	77.833	ENSPKIG00000012859	tnrc6a	96	80.978	Paramormyrops_kingsleyae
ENSFALG00000003757	TNRC6A	77	83.311	ENSPSIG00000003965	TNRC6A	100	82.450	Pelodiscus_sinensis
ENSFALG00000003757	TNRC6A	99	77.192	ENSPEMG00000016318	Tnrc6a	100	76.039	Peromyscus_maniculatus_bairdii
ENSFALG00000003757	TNRC6A	97	85.307	ENSPCIG00000012106	TNRC6A	100	85.571	Phascolarctos_cinereus
ENSFALG00000003757	TNRC6A	99	79.276	ENSPPYG00000007202	TNRC6A	100	78.381	Pongo_abelii
ENSFALG00000003757	TNRC6A	94	88.660	ENSPCAG00000008260	TNRC6A	94	88.660	Procavia_capensis
ENSFALG00000003757	TNRC6A	99	78.108	ENSPCOG00000010134	TNRC6A	99	77.062	Propithecus_coquereli
ENSFALG00000003757	TNRC6A	88	62.742	ENSPVAG00000012066	TNRC6A	99	62.891	Pteropus_vampyrus
ENSFALG00000003757	TNRC6A	97	78.373	ENSRNOG00000024737	Tnrc6a	98	77.543	Rattus_norvegicus
ENSFALG00000003757	TNRC6A	97	79.742	ENSRBIG00000014222	TNRC6A	99	79.339	Rhinopithecus_bieti
ENSFALG00000003757	TNRC6A	99	80.101	ENSRROG00000032360	TNRC6A	99	79.101	Rhinopithecus_roxellana
ENSFALG00000003757	TNRC6A	97	80.115	ENSSBOG00000036197	TNRC6A	100	82.425	Saimiri_boliviensis_boliviensis
ENSFALG00000003757	TNRC6A	91	83.000	ENSSHAG00000008811	TNRC6A	100	83.222	Sarcophilus_harrisii
ENSFALG00000003757	TNRC6A	91	60.195	ENSSFOG00015008920	tnrc6a	96	83.223	Scleropages_formosus
ENSFALG00000003757	TNRC6A	71	70.417	ENSSARG00000002479	TNRC6A	89	70.902	Sorex_araneus
ENSFALG00000003757	TNRC6A	90	85.900	ENSSPUG00000010525	TNRC6A	100	85.730	Sphenodon_punctatus
ENSFALG00000003757	TNRC6A	93	87.037	ENSSSCG00000038870	TNRC6A	100	82.654	Sus_scrofa
ENSFALG00000003757	TNRC6A	99	93.176	ENSTGUG00000006142	TNRC6A	100	93.227	Taeniopygia_guttata
ENSFALG00000003757	TNRC6A	97	77.577	ENSTBEG00000014965	TNRC6A	99	77.503	Tupaia_belangeri
ENSFALG00000003757	TNRC6A	93	86.624	ENSTTRG00000002008	TNRC6A	91	87.458	Tursiops_truncatus
ENSFALG00000003757	TNRC6A	79	74.298	ENSUAMG00000006656	-	93	74.426	Ursus_americanus
ENSFALG00000003757	TNRC6A	98	79.547	ENSUMAG00000008274	TNRC6A	100	82.202	Ursus_maritimus
ENSFALG00000003757	TNRC6A	56	75.415	ENSVPAG00000010764	-	55	75.531	Vicugna_pacos
ENSFALG00000003757	TNRC6A	92	93.514	ENSVVUG00000005380	TNRC6A	99	79.907	Vulpes_vulpes
ENSFALG00000003757	TNRC6A	95	68.359	ENSXETG00000030437	TNRC6A	99	67.878	Xenopus_tropicalis