EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003825 (Gene tree)
Gene ID: -
Gene Symbol: TRMT12
Alias: FLJ20772|TYW2|Trm12
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 46024 bases
Position: chrJH603216.1:872462-918485
Accession: 26091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000003986	Met_10	PF02475.16	7.7e-29	1	1
ENSFALP00000003988	Met_10	PF02475.16	9.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004006	TRMT12-202	2122	-	ENSFALP00000003988	286 (aa)	-	U3JMI4
ENSFALT00000004004	TRMT12-201	657	-	ENSFALP00000003986	219 (aa)	-	U3JMI2

Gene Model

Click here to download ENSFALG00000003825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003825	TRMT12	94	70.388	ENSG00000183665	TRMT12	64	62.369	Homo_sapiens
ENSFALG00000003825	TRMT12	93	65.196	ENSAPOG00000011979	trmt12	65	56.184	Acanthochromis_polyacanthus
ENSFALG00000003825	TRMT12	99	69.091	ENSAMEG00000019612	TRMT12	63	63.574	Ailuropoda_melanoleuca
ENSFALG00000003825	TRMT12	98	62.150	ENSACIG00000012982	trmt12	68	56.228	Amphilophus_citrinellus
ENSFALG00000003825	TRMT12	98	64.486	ENSAOCG00000020570	trmt12	67	58.363	Amphiprion_ocellaris
ENSFALG00000003825	TRMT12	93	66.667	ENSAPEG00000006335	trmt12	67	58.007	Amphiprion_percula
ENSFALG00000003825	TRMT12	93	65.196	ENSATEG00000018316	trmt12	65	58.007	Anabas_testudineus
ENSFALG00000003825	TRMT12	93	66.667	ENSACLG00000001008	trmt12	64	59.075	Astatotilapia_calliptera
ENSFALG00000003825	TRMT12	93	65.686	ENSAMXG00000040366	trmt12	66	57.093	Astyanax_mexicanus
ENSFALG00000003825	TRMT12	98	70.507	ENSBTAG00000020398	TRMT12	61	63.793	Bos_taurus
ENSFALG00000003825	TRMT12	94	68.932	ENSCJAG00000022174	TRMT12	64	60.900	Callithrix_jacchus
ENSFALG00000003825	TRMT12	99	68.182	ENSCAFG00000001040	TRMT12	65	62.543	Canis_familiaris
ENSFALG00000003825	TRMT12	99	68.182	ENSCAFG00020006500	TRMT12	65	62.543	Canis_lupus_dingo
ENSFALG00000003825	TRMT12	98	69.124	ENSCHIG00000016574	TRMT12	65	63.103	Capra_hircus
ENSFALG00000003825	TRMT12	94	68.447	ENSCPOG00000026520	TRMT12	64	61.210	Cavia_porcellus
ENSFALG00000003825	TRMT12	94	69.903	ENSCSAG00000018615	TRMT12	64	62.021	Chlorocebus_sabaeus
ENSFALG00000003825	TRMT12	95	75.000	ENSCPBG00000014290	TRMT12	65	66.443	Chrysemys_picta_bellii
ENSFALG00000003825	TRMT12	93	50.490	ENSCING00000019633	-	86	43.929	Ciona_intestinalis
ENSFALG00000003825	TRMT12	93	52.451	ENSCSAVG00000000415	-	79	43.885	Ciona_savignyi
ENSFALG00000003825	TRMT12	95	73.206	ENSCGRG00001014834	Trmt12	64	67.719	Cricetulus_griseus_chok1gshd
ENSFALG00000003825	TRMT12	99	63.761	ENSCSEG00000002675	trmt12	62	58.657	Cynoglossus_semilaevis
ENSFALG00000003825	TRMT12	93	63.725	ENSCVAG00000005590	trmt12	65	56.537	Cyprinodon_variegatus
ENSFALG00000003825	TRMT12	96	61.137	ENSDARG00000060338	trmt12	66	54.545	Danio_rerio
ENSFALG00000003825	TRMT12	100	68.326	ENSETEG00000009373	TRMT12	63	63.732	Echinops_telfairi
ENSFALG00000003825	TRMT12	94	70.874	ENSEASG00005022441	TRMT12	65	62.543	Equus_asinus_asinus
ENSFALG00000003825	TRMT12	94	70.874	ENSEEUG00000004844	TRMT12	63	62.411	Erinaceus_europaeus
ENSFALG00000003825	TRMT12	94	66.341	ENSELUG00000004240	trmt12	71	57.895	Esox_lucius
ENSFALG00000003825	TRMT12	94	69.417	ENSFDAG00000016647	TRMT12	65	61.620	Fukomys_damarensis
ENSFALG00000003825	TRMT12	99	46.996	ENSFHEG00000017338	trmt12	66	46.996	Fundulus_heteroclitus
ENSFALG00000003825	TRMT12	95	79.227	ENSGALG00000006773	TRMT12	63	72.474	Gallus_gallus
ENSFALG00000003825	TRMT12	93	61.765	ENSGAFG00000020056	trmt12	66	54.577	Gambusia_affinis
ENSFALG00000003825	TRMT12	93	63.054	ENSGACG00000017351	trmt12	66	55.714	Gasterosteus_aculeatus
ENSFALG00000003825	TRMT12	100	72.603	ENSGAGG00000006032	TRMT12	66	67.458	Gopherus_agassizii
ENSFALG00000003825	TRMT12	93	66.667	ENSHBUG00000016412	trmt12	64	59.075	Haplochromis_burtoni
ENSFALG00000003825	TRMT12	98	67.281	ENSHGLG00000020498	TRMT12	65	61.972	Heterocephalus_glaber_female
ENSFALG00000003825	TRMT12	98	67.281	ENSHGLG00100020132	TRMT12	65	61.972	Heterocephalus_glaber_male
ENSFALG00000003825	TRMT12	93	65.025	ENSHCOG00000005050	trmt12	76	57.597	Hippocampus_comes
ENSFALG00000003825	TRMT12	93	63.235	ENSIPUG00000018011	trmt12	61	56.537	Ictalurus_punctatus
ENSFALG00000003825	TRMT12	99	68.182	ENSSTOG00000030617	TRMT12	65	61.938	Ictidomys_tridecemlineatus
ENSFALG00000003825	TRMT12	93	63.592	ENSKMAG00000000891	trmt12	64	56.429	Kryptolebias_marmoratus
ENSFALG00000003825	TRMT12	93	63.725	ENSLBEG00000028712	trmt12	66	56.098	Labrus_bergylta
ENSFALG00000003825	TRMT12	83	57.500	ENSLBEG00000017456	-	89	57.676	Labrus_bergylta
ENSFALG00000003825	TRMT12	94	69.268	ENSLACG00000015869	TRMT12	65	59.386	Latimeria_chalumnae
ENSFALG00000003825	TRMT12	98	66.071	ENSLOCG00000015290	trmt12	65	65.357	Lepisosteus_oculatus
ENSFALG00000003825	TRMT12	94	71.359	ENSLAFG00000012519	TRMT12	65	64.437	Loxodonta_africana
ENSFALG00000003825	TRMT12	94	70.388	ENSMMUG00000015490	TRMT12	64	62.369	Macaca_mulatta
ENSFALG00000003825	TRMT12	93	64.706	ENSMAMG00000020311	trmt12	65	58.719	Mastacembelus_armatus
ENSFALG00000003825	TRMT12	93	67.157	ENSMZEG00005007349	trmt12	64	59.431	Maylandia_zebra
ENSFALG00000003825	TRMT12	95	79.710	ENSMGAG00000004174	TRMT12	65	73.171	Meleagris_gallopavo
ENSFALG00000003825	TRMT12	93	65.196	ENSMMOG00000000412	trmt12	66	57.244	Mola_mola
ENSFALG00000003825	TRMT12	94	71.359	ENSMODG00000011798	-	57	65.125	Monodelphis_domestica
ENSFALG00000003825	TRMT12	94	70.388	ENSMODG00000021403	-	62	65.836	Monodelphis_domestica
ENSFALG00000003825	TRMT12	93	65.686	ENSMALG00000008668	trmt12	65	58.363	Monopterus_albus
ENSFALG00000003825	TRMT12	97	70.561	MGP_CAROLIEiJ_G0019820	Trmt12	64	63.604	Mus_caroli
ENSFALG00000003825	TRMT12	97	72.430	ENSMUSG00000037085	Trmt12	63	64.311	Mus_musculus
ENSFALG00000003825	TRMT12	99	71.364	MGP_PahariEiJ_G0019829	Trmt12	64	65.371	Mus_pahari
ENSFALG00000003825	TRMT12	97	71.028	MGP_SPRETEiJ_G0020717	Trmt12	63	63.604	Mus_spretus
ENSFALG00000003825	TRMT12	99	70.455	ENSMPUG00000019150	TRMT12	64	64.685	Mustela_putorius_furo
ENSFALG00000003825	TRMT12	94	71.845	ENSMLUG00000003753	TRMT12	65	65.035	Myotis_lucifugus
ENSFALG00000003825	TRMT12	93	72.414	ENSNGAG00000014548	Trmt12	65	63.287	Nannospalax_galili
ENSFALG00000003825	TRMT12	93	67.317	ENSNBRG00000021510	trmt12	65	60.000	Neolamprologus_brichardi
ENSFALG00000003825	TRMT12	94	71.845	ENSOPRG00000008067	TRMT12	63	60.777	Ochotona_princeps
ENSFALG00000003825	TRMT12	98	67.742	ENSODEG00000018933	TRMT12	65	62.676	Octodon_degus
ENSFALG00000003825	TRMT12	93	66.176	ENSONIG00000002614	trmt12	64	58.007	Oreochromis_niloticus
ENSFALG00000003825	TRMT12	99	63.509	ENSOANG00000009987	TRMT12	64	63.509	Ornithorhynchus_anatinus
ENSFALG00000003825	TRMT12	99	70.000	ENSOCUG00000026379	TRMT12	64	57.143	Oryctolagus_cuniculus
ENSFALG00000003825	TRMT12	98	65.888	ENSORLG00000001280	trmt12	65	60.142	Oryzias_latipes
ENSFALG00000003825	TRMT12	98	65.888	ENSORLG00020000708	trmt12	65	60.142	Oryzias_latipes_hni
ENSFALG00000003825	TRMT12	98	65.888	ENSORLG00015012344	trmt12	65	59.786	Oryzias_latipes_hsok
ENSFALG00000003825	TRMT12	93	67.157	ENSOMEG00000015267	trmt12	64	59.786	Oryzias_melastigma
ENSFALG00000003825	TRMT12	99	67.727	ENSOGAG00000015845	TRMT12	65	62.324	Otolemur_garnettii
ENSFALG00000003825	TRMT12	98	67.290	ENSPKIG00000004640	trmt12	67	63.604	Paramormyrops_kingsleyae
ENSFALG00000003825	TRMT12	90	67.658	ENSPSIG00000003476	TRMT12	99	68.773	Pelodiscus_sinensis
ENSFALG00000003825	TRMT12	93	63.725	ENSPMGG00000016356	trmt12	64	55.789	Periophthalmus_magnuspinnatus
ENSFALG00000003825	TRMT12	94	71.845	ENSPCIG00000002967	TRMT12	57	66.192	Phascolarctos_cinereus
ENSFALG00000003825	TRMT12	93	61.765	ENSPFOG00000016931	trmt12	64	54.577	Poecilia_formosa
ENSFALG00000003825	TRMT12	93	63.235	ENSPLAG00000020621	trmt12	66	56.338	Poecilia_latipinna
ENSFALG00000003825	TRMT12	93	62.745	ENSPMEG00000000818	trmt12	66	55.282	Poecilia_mexicana
ENSFALG00000003825	TRMT12	93	63.725	ENSPREG00000011621	trmt12	66	55.634	Poecilia_reticulata
ENSFALG00000003825	TRMT12	94	70.388	ENSPPYG00000018866	TRMT12	64	62.369	Pongo_abelii
ENSFALG00000003825	TRMT12	100	70.136	ENSPCAG00000000556	TRMT12	64	65.845	Procavia_capensis
ENSFALG00000003825	TRMT12	94	71.707	ENSPVAG00000009149	TRMT12	64	63.732	Pteropus_vampyrus
ENSFALG00000003825	TRMT12	93	66.176	ENSPNYG00000010696	trmt12	68	57.951	Pundamilia_nyererei
ENSFALG00000003825	TRMT12	93	66.176	ENSPNAG00000019028	trmt12	65	57.292	Pygocentrus_nattereri
ENSFALG00000003825	TRMT12	97	71.628	ENSRNOG00000008978	Trmt12	65	64.664	Rattus_norvegicus
ENSFALG00000003825	TRMT12	94	71.845	ENSSHAG00000003345	TRMT12	62	65.714	Sarcophilus_harrisii
ENSFALG00000003825	TRMT12	99	64.311	ENSSFOG00015006090	trmt12	65	64.311	Scleropages_formosus
ENSFALG00000003825	TRMT12	100	63.470	ENSSMAG00000013247	trmt12	66	59.011	Scophthalmus_maximus
ENSFALG00000003825	TRMT12	93	67.157	ENSSDUG00000006168	trmt12	65	57.597	Seriola_dumerili
ENSFALG00000003825	TRMT12	94	66.990	ENSSLDG00000025007	trmt12	64	58.571	Seriola_lalandi_dorsalis
ENSFALG00000003825	TRMT12	94	75.728	ENSSPUG00000005321	TRMT12	65	63.000	Sphenodon_punctatus
ENSFALG00000003825	TRMT12	93	64.706	ENSSPAG00000009435	trmt12	62	56.228	Stegastes_partitus
ENSFALG00000003825	TRMT12	100	83.275	ENSTGUG00000002280	TRMT12	69	82.927	Taeniopygia_guttata
ENSFALG00000003825	TRMT12	97	60.930	ENSTRUG00000011548	trmt12	65	56.842	Takifugu_rubripes
ENSFALG00000003825	TRMT12	99	60.455	ENSTNIG00000016866	trmt12	64	55.439	Tetraodon_nigroviridis
ENSFALG00000003825	TRMT12	99	69.545	ENSUAMG00000002067	TRMT12	66	65.035	Ursus_americanus
ENSFALG00000003825	TRMT12	94	71.845	ENSVPAG00000006519	TRMT12	64	63.380	Vicugna_pacos
ENSFALG00000003825	TRMT12	99	68.182	ENSVVUG00000016790	TRMT12	64	62.887	Vulpes_vulpes
ENSFALG00000003825	TRMT12	92	71.287	ENSXETG00000009641	trmt12	62	59.717	Xenopus_tropicalis
ENSFALG00000003825	TRMT12	93	62.927	ENSXCOG00000016505	trmt12	69	54.737	Xiphophorus_couchianus
ENSFALG00000003825	TRMT12	93	63.415	ENSXMAG00000025318	trmt12	66	54.737	Xiphophorus_maculatus