EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000003878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 36680 bases
Position: chrJH603176.1:5129629-5166308
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004045	AF-4	PF05110.13	7.5e-175	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004063	-	1785	-	ENSFALP00000004045	594 (aa)	-	U3JMP1

Gene Model

Click here to download ENSFALG00000003878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000003878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000003878	-	99	75.415	ENSG00000144218	AFF3	99	82.412	Homo_sapiens
ENSFALG00000003878	-	79	61.710	ENSG00000155966	AFF2	53	60.075	Homo_sapiens
ENSFALG00000003878	-	99	75.541	ENSAMEG00000013204	-	64	75.541	Ailuropoda_melanoleuca
ENSFALG00000003878	-	82	63.390	ENSAPLG00000003660	-	66	61.856	Anas_platyrhynchos
ENSFALG00000003878	-	87	96.705	ENSAPLG00000016080	-	92	97.260	Anas_platyrhynchos
ENSFALG00000003878	-	79	62.082	ENSANAG00000023509	AFF2	53	60.448	Aotus_nancymaae
ENSFALG00000003878	-	99	76.412	ENSANAG00000030084	AFF3	64	77.052	Aotus_nancymaae
ENSFALG00000003878	-	99	75.500	ENSBTAG00000012449	AFF3	52	75.500	Bos_taurus
ENSFALG00000003878	-	79	61.710	ENSCJAG00000000061	AFF2	55	60.075	Callithrix_jacchus
ENSFALG00000003878	-	76	57.194	ENSCHIG00000017897	AFF2	55	56.318	Capra_hircus
ENSFALG00000003878	-	79	61.710	ENSTSYG00000000526	AFF2	56	59.701	Carlito_syrichta
ENSFALG00000003878	-	99	76.047	ENSTSYG00000029683	AFF3	56	76.047	Carlito_syrichta
ENSFALG00000003878	-	81	77.066	ENSCAPG00000012999	AFF3	50	76.860	Cavia_aperea
ENSFALG00000003878	-	92	71.403	ENSCPOG00000006346	AFF3	50	74.074	Cavia_porcellus
ENSFALG00000003878	-	80	62.082	ENSCCAG00000025994	AFF2	53	60.448	Cebus_capucinus
ENSFALG00000003878	-	99	75.581	ENSCCAG00000023489	AFF3	69	76.214	Cebus_capucinus
ENSFALG00000003878	-	79	61.710	ENSCATG00000040342	AFF2	54	60.075	Cercocebus_atys
ENSFALG00000003878	-	85	78.516	ENSCLAG00000017100	AFF3	50	78.516	Chinchilla_lanigera
ENSFALG00000003878	-	99	76.549	ENSCSAG00000017193	AFF3	62	76.549	Chlorocebus_sabaeus
ENSFALG00000003878	-	79	61.710	ENSCANG00000029116	AFF2	55	60.075	Colobus_angolensis_palliatus
ENSFALG00000003878	-	99	75.748	ENSCANG00000035188	AFF3	64	76.382	Colobus_angolensis_palliatus
ENSFALG00000003878	-	99	73.154	ENSDNOG00000047861	-	71	74.664	Dasypus_novemcinctus
ENSFALG00000003878	-	99	74.300	ENSEASG00005018275	AFF3	52	75.292	Equus_asinus_asinus
ENSFALG00000003878	-	99	74.300	ENSECAG00000006249	AFF3	52	75.292	Equus_caballus
ENSFALG00000003878	-	82	44.862	ENSGMOG00000012559	-	90	44.466	Gadus_morhua
ENSFALG00000003878	-	82	44.204	ENSGACG00000002900	aff3	91	43.615	Gasterosteus_aculeatus
ENSFALG00000003878	-	99	83.729	ENSGAGG00000024801	-	75	84.848	Gopherus_agassizii
ENSFALG00000003878	-	98	46.429	ENSGAGG00000016287	-	74	46.341	Gopherus_agassizii
ENSFALG00000003878	-	78	61.710	ENSGGOG00000010543	AFF2	53	60.075	Gorilla_gorilla
ENSFALG00000003878	-	99	73.333	ENSHGLG00000005004	-	60	73.300	Heterocephalus_glaber_female
ENSFALG00000003878	-	81	62.454	ENSHGLG00100010140	AFF2	59	60.075	Heterocephalus_glaber_male
ENSFALG00000003878	-	99	72.591	ENSHGLG00100016907	-	74	72.562	Heterocephalus_glaber_male
ENSFALG00000003878	-	99	41.527	ENSLACG00000010860	aff2	76	41.780	Latimeria_chalumnae
ENSFALG00000003878	-	99	63.455	ENSLACG00000009317	-	77	65.436	Latimeria_chalumnae
ENSFALG00000003878	-	69	53.771	ENSLOCG00000001338	-	97	53.883	Lepisosteus_oculatus
ENSFALG00000003878	-	78	61.710	ENSLAFG00000018691	AFF2	87	50.685	Loxodonta_africana
ENSFALG00000003878	-	79	61.710	ENSMFAG00000044807	AFF2	53	60.075	Macaca_fascicularis
ENSFALG00000003878	-	79	61.710	ENSMMUG00000000466	AFF2	53	60.075	Macaca_mulatta
ENSFALG00000003878	-	99	75.456	ENSMMUG00000022836	-	61	76.087	Macaca_mulatta
ENSFALG00000003878	-	79	61.710	ENSMNEG00000035909	AFF2	53	60.075	Macaca_nemestrina
ENSFALG00000003878	-	79	61.710	ENSMLEG00000038832	AFF2	54	60.075	Mandrillus_leucophaeus
ENSFALG00000003878	-	99	76.047	ENSMLEG00000041792	AFF3	67	76.047	Mandrillus_leucophaeus
ENSFALG00000003878	-	98	45.605	ENSMGAG00000008246	-	72	45.258	Meleagris_gallopavo
ENSFALG00000003878	-	99	73.913	ENSMOCG00000005082	-	60	73.913	Microtus_ochrogaster
ENSFALG00000003878	-	85	82.283	ENSMODG00000027810	-	65	73.529	Monodelphis_domestica
ENSFALG00000003878	-	99	73.569	ENSMLUG00000015255	AFF3	80	74.622	Myotis_lucifugus
ENSFALG00000003878	-	99	72.681	ENSNGAG00000002408	Aff3	60	74.199	Nannospalax_galili
ENSFALG00000003878	-	79	61.710	ENSNLEG00000013346	AFF2	53	60.075	Nomascus_leucogenys
ENSFALG00000003878	-	99	71.309	ENSODEG00000007806	AFF3	61	72.287	Octodon_degus
ENSFALG00000003878	-	69	46.572	ENSONIG00000014151	-	97	47.585	Oreochromis_niloticus
ENSFALG00000003878	-	87	71.098	ENSOANG00000004623	-	72	74.405	Ornithorhynchus_anatinus
ENSFALG00000003878	-	81	67.143	ENSOANG00000001095	-	56	67.143	Ornithorhynchus_anatinus
ENSFALG00000003878	-	89	76.316	ENSOARG00000013353	-	97	78.363	Ovis_aries
ENSFALG00000003878	-	78	61.194	ENSPTIG00000018890	AFF2	54	60.075	Panthera_tigris_altaica
ENSFALG00000003878	-	99	75.500	ENSPTIG00000018781	AFF3	68	75.667	Panthera_tigris_altaica
ENSFALG00000003878	-	79	61.710	ENSPTRG00000022353	AFF2	53	60.075	Pan_troglodytes
ENSFALG00000003878	-	79	61.710	ENSPANG00000002926	AFF2	55	60.075	Papio_anubis
ENSFALG00000003878	-	81	45.122	ENSPKIG00000011220	aff3	53	44.672	Paramormyrops_kingsleyae
ENSFALG00000003878	-	99	83.390	ENSPSIG00000006520	-	51	82.993	Pelodiscus_sinensis
ENSFALG00000003878	-	98	48.247	ENSPSIG00000010309	AFF2	74	48.241	Pelodiscus_sinensis
ENSFALG00000003878	-	80	37.398	ENSPMGG00000006477	aff4	84	36.585	Periophthalmus_magnuspinnatus
ENSFALG00000003878	-	99	76.623	ENSPCIG00000013816	AFF3	68	76.948	Phascolarctos_cinereus
ENSFALG00000003878	-	78	56.228	ENSPFOG00000004524	aff2	55	54.209	Poecilia_formosa
ENSFALG00000003878	-	79	61.710	ENSPCOG00000013963	AFF2	53	60.075	Propithecus_coquereli
ENSFALG00000003878	-	99	69.787	ENSRNOG00000018830	Aff3	50	71.429	Rattus_norvegicus
ENSFALG00000003878	-	79	61.194	ENSRBIG00000035160	AFF2	56	60.075	Rhinopithecus_bieti
ENSFALG00000003878	-	79	61.710	ENSRROG00000044189	AFF2	56	60.075	Rhinopithecus_roxellana
ENSFALG00000003878	-	79	61.567	ENSSBOG00000020604	AFF2	53	60.821	Saimiri_boliviensis_boliviensis
ENSFALG00000003878	-	89	60.417	ENSSHAG00000009556	AFF2	64	60.764	Sarcophilus_harrisii
ENSFALG00000003878	-	81	44.722	ENSSFOG00015000615	aff3	53	44.882	Scleropages_formosus
ENSFALG00000003878	-	70	33.565	ENSSDUG00000023775	-	56	33.333	Seriola_dumerili
ENSFALG00000003878	-	99	78.921	ENSSPUG00000009604	AFF3	73	77.280	Sphenodon_punctatus
ENSFALG00000003878	-	100	96.296	ENSTGUG00000010075	-	89	96.459	Taeniopygia_guttata
ENSFALG00000003878	-	90	45.353	ENSTNIG00000013869	aff3	90	46.123	Tetraodon_nigroviridis
ENSFALG00000003878	-	99	75.167	ENSUMAG00000007823	-	70	75.167	Ursus_maritimus
ENSFALG00000003878	-	99	50.077	ENSXETG00000030016	AFF3	99	81.526	Xenopus_tropicalis