EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000004027 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 127357 bases
Position: chrJH603203.1:4584253-4711609
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004205	Fox-1_C	PF12414.8	1.8e-37	1	1
ENSFALP00000004205	RRM_1	PF00076.22	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004226	RBFOX1-201	1993	-	ENSFALP00000004205	333 (aa)	-	U3JN51

Gene Model

Click here to download ENSFALG00000004027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000004027	RBFOX1	91	65.273	ENSFALG00000012288	RBFOX3	81	66.364
ENSFALG00000004027	RBFOX1	94	69.688	ENSFALG00000013111	RBFOX2	81	69.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004027	RBFOX1	100	92.793	ENSG00000078328	RBFOX1	98	91.571	Homo_sapiens
ENSFALG00000004027	RBFOX1	99	73.775	ENSAPOG00000003197	rbfox1	83	72.365	Acanthochromis_polyacanthus
ENSFALG00000004027	RBFOX1	67	92.793	ENSAMEG00000008605	RBFOX1	89	92.793	Ailuropoda_melanoleuca
ENSFALG00000004027	RBFOX1	66	68.273	ENSACIG00000005478	rbfox1	56	68.273	Amphilophus_citrinellus
ENSFALG00000004027	RBFOX1	87	71.661	ENSAOCG00000008283	rbfox1	96	71.336	Amphiprion_ocellaris
ENSFALG00000004027	RBFOX1	93	65.176	ENSAPEG00000010636	rbfox1	82	68.493	Amphiprion_percula
ENSFALG00000004027	RBFOX1	89	69.841	ENSATEG00000007513	rbfox1	96	70.227	Anabas_testudineus
ENSFALG00000004027	RBFOX1	98	98.171	ENSAPLG00000013263	RBFOX1	82	98.171	Anas_platyrhynchos
ENSFALG00000004027	RBFOX1	99	87.087	ENSACAG00000004013	RBFOX1	83	87.087	Anolis_carolinensis
ENSFALG00000004027	RBFOX1	100	92.492	ENSANAG00000029527	RBFOX1	86	88.073	Aotus_nancymaae
ENSFALG00000004027	RBFOX1	69	87.773	ENSAMXG00000002431	rbfox1	73	79.767	Astyanax_mexicanus
ENSFALG00000004027	RBFOX1	97	94.427	ENSBTAG00000007210	RBFOX1	86	94.427	Bos_taurus
ENSFALG00000004027	RBFOX1	100	92.192	ENSCJAG00000017351	RBFOX1	77	94.427	Callithrix_jacchus
ENSFALG00000004027	RBFOX1	97	92.901	ENSCAFG00000019082	RBFOX1	82	92.901	Canis_familiaris
ENSFALG00000004027	RBFOX1	80	95.149	ENSCAFG00020024881	RBFOX1	75	95.149	Canis_lupus_dingo
ENSFALG00000004027	RBFOX1	97	95.046	ENSCHIG00000023549	RBFOX1	86	95.046	Capra_hircus
ENSFALG00000004027	RBFOX1	97	94.720	ENSTSYG00000005334	RBFOX1	86	94.720	Carlito_syrichta
ENSFALG00000004027	RBFOX1	97	94.099	ENSCAPG00000017669	RBFOX1	83	94.099	Cavia_aperea
ENSFALG00000004027	RBFOX1	100	91.892	ENSCPOG00000011314	RBFOX1	82	93.808	Cavia_porcellus
ENSFALG00000004027	RBFOX1	100	92.492	ENSCCAG00000023031	RBFOX1	87	86.787	Cebus_capucinus
ENSFALG00000004027	RBFOX1	100	92.793	ENSCATG00000033816	RBFOX1	86	88.379	Cercocebus_atys
ENSFALG00000004027	RBFOX1	99	92.145	ENSCLAG00000012761	RBFOX1	86	94.136	Chinchilla_lanigera
ENSFALG00000004027	RBFOX1	97	95.046	ENSCSAG00000008739	RBFOX1	86	95.046	Chlorocebus_sabaeus
ENSFALG00000004027	RBFOX1	73	86.008	ENSCHOG00000012843	RBFOX1	58	86.008	Choloepus_hoffmanni
ENSFALG00000004027	RBFOX1	100	97.006	ENSCPBG00000026626	RBFOX1	86	99.381	Chrysemys_picta_bellii
ENSFALG00000004027	RBFOX1	100	92.793	ENSCANG00000033125	RBFOX1	78	92.793	Colobus_angolensis_palliatus
ENSFALG00000004027	RBFOX1	100	91.291	ENSCGRG00001013729	Rbfox1	83	91.291	Cricetulus_griseus_chok1gshd
ENSFALG00000004027	RBFOX1	100	91.291	ENSCGRG00000003272	Rbfox1	83	91.291	Cricetulus_griseus_crigri
ENSFALG00000004027	RBFOX1	93	68.580	ENSCSEG00000008840	rbfox1	82	68.580	Cynoglossus_semilaevis
ENSFALG00000004027	RBFOX1	100	78.743	ENSDARG00000014746	rbfox1	100	87.805	Danio_rerio
ENSFALG00000004027	RBFOX1	97	95.046	ENSDNOG00000043612	RBFOX1	78	95.046	Dasypus_novemcinctus
ENSFALG00000004027	RBFOX1	97	91.718	ENSDORG00000010024	Rbfox1	84	91.411	Dipodomys_ordii
ENSFALG00000004027	RBFOX1	97	69.753	ENSETEG00000003771	RBFOX1	77	69.753	Echinops_telfairi
ENSFALG00000004027	RBFOX1	100	92.814	ENSEASG00005011599	RBFOX1	82	92.593	Equus_asinus_asinus
ENSFALG00000004027	RBFOX1	100	92.515	ENSECAG00000012667	RBFOX1	86	94.737	Equus_caballus
ENSFALG00000004027	RBFOX1	74	69.767	ENSELUG00000013096	rbfox1	73	69.767	Esox_lucius
ENSFALG00000004027	RBFOX1	100	92.814	ENSFCAG00000025322	RBFOX1	86	95.046	Felis_catus
ENSFALG00000004027	RBFOX1	100	92.192	ENSFDAG00000007388	RBFOX1	83	92.192	Fukomys_damarensis
ENSFALG00000004027	RBFOX1	100	97.006	ENSGALG00000034325	RBFOX1	85	99.381	Gallus_gallus
ENSFALG00000004027	RBFOX1	97	98.762	ENSGAGG00000023681	RBFOX1	86	96.296	Gopherus_agassizii
ENSFALG00000004027	RBFOX1	100	92.793	ENSGGOG00000016871	-	86	86.787	Gorilla_gorilla
ENSFALG00000004027	RBFOX1	100	91.892	ENSHGLG00000016944	RBFOX1	86	94.136	Heterocephalus_glaber_female
ENSFALG00000004027	RBFOX1	100	91.892	ENSHGLG00100003272	RBFOX1	86	94.136	Heterocephalus_glaber_male
ENSFALG00000004027	RBFOX1	93	69.470	ENSHCOG00000016419	rbfox1	83	69.470	Hippocampus_comes
ENSFALG00000004027	RBFOX1	97	82.972	ENSIPUG00000015215	rbfox1	85	82.663	Ictalurus_punctatus
ENSFALG00000004027	RBFOX1	100	91.592	ENSSTOG00000000322	RBFOX1	86	93.808	Ictidomys_tridecemlineatus
ENSFALG00000004027	RBFOX1	100	88.889	ENSJJAG00000002575	Rbfox1	81	91.049	Jaculus_jaculus
ENSFALG00000004027	RBFOX1	99	69.617	ENSLBEG00000014659	rbfox1	87	71.554	Labrus_bergylta
ENSFALG00000004027	RBFOX1	98	88.720	ENSLOCG00000006675	rbfox1	82	88.720	Lepisosteus_oculatus
ENSFALG00000004027	RBFOX1	72	96.281	ENSLAFG00000011480	RBFOX1	79	96.281	Loxodonta_africana
ENSFALG00000004027	RBFOX1	100	93.093	ENSMFAG00000036447	RBFOX1	83	94.444	Macaca_fascicularis
ENSFALG00000004027	RBFOX1	100	93.093	ENSMMUG00000003458	RBFOX1	87	95.356	Macaca_mulatta
ENSFALG00000004027	RBFOX1	100	93.093	ENSMNEG00000032034	RBFOX1	80	95.356	Macaca_nemestrina
ENSFALG00000004027	RBFOX1	100	92.793	ENSMLEG00000015382	RBFOX1	78	92.593	Mandrillus_leucophaeus
ENSFALG00000004027	RBFOX1	93	71.779	ENSMAMG00000003142	rbfox1	96	69.836	Mastacembelus_armatus
ENSFALG00000004027	RBFOX1	84	92.171	ENSMGAG00000008606	RBFOX1	95	92.029	Meleagris_gallopavo
ENSFALG00000004027	RBFOX1	93	57.235	ENSMAUG00000020570	Rbfox1	82	55.627	Mesocricetus_auratus
ENSFALG00000004027	RBFOX1	100	92.192	ENSMICG00000034286	RBFOX1	86	91.975	Microcebus_murinus
ENSFALG00000004027	RBFOX1	100	91.291	ENSMOCG00000020932	Rbfox1	83	93.396	Microtus_ochrogaster
ENSFALG00000004027	RBFOX1	93	71.885	ENSMMOG00000009716	rbfox1	78	71.565	Mola_mola
ENSFALG00000004027	RBFOX1	93	97.428	ENSMODG00000005826	RBFOX1	88	97.428	Monodelphis_domestica
ENSFALG00000004027	RBFOX1	99	73.607	ENSMALG00000003337	rbfox1	83	72.464	Monopterus_albus
ENSFALG00000004027	RBFOX1	100	91.592	MGP_CAROLIEiJ_G0020427	Rbfox1	83	91.592	Mus_caroli
ENSFALG00000004027	RBFOX1	100	91.291	ENSMUSG00000008658	Rbfox1	98	90.559	Mus_musculus
ENSFALG00000004027	RBFOX1	100	91.592	MGP_PahariEiJ_G0016135	Rbfox1	83	91.592	Mus_pahari
ENSFALG00000004027	RBFOX1	100	90.991	MGP_SPRETEiJ_G0021321	Rbfox1	83	90.991	Mus_spretus
ENSFALG00000004027	RBFOX1	97	95.046	ENSMPUG00000014822	RBFOX1	82	95.046	Mustela_putorius_furo
ENSFALG00000004027	RBFOX1	72	96.266	ENSMLUG00000015896	RBFOX1	79	96.266	Myotis_lucifugus
ENSFALG00000004027	RBFOX1	100	91.892	ENSNGAG00000023276	Rbfox1	83	94.410	Nannospalax_galili
ENSFALG00000004027	RBFOX1	97	57.184	ENSNBRG00000011084	rbfox1	78	57.184	Neolamprologus_brichardi
ENSFALG00000004027	RBFOX1	100	92.492	ENSNLEG00000010017	-	78	92.492	Nomascus_leucogenys
ENSFALG00000004027	RBFOX1	73	96.296	ENSMEUG00000012525	RBFOX1	58	96.296	Notamacropus_eugenii
ENSFALG00000004027	RBFOX1	93	77.814	ENSOPRG00000006199	-	75	77.955	Ochotona_princeps
ENSFALG00000004027	RBFOX1	100	91.892	ENSODEG00000013166	RBFOX1	82	93.808	Octodon_degus
ENSFALG00000004027	RBFOX1	97	97.214	ENSOANG00000002379	RBFOX1	86	97.214	Ornithorhynchus_anatinus
ENSFALG00000004027	RBFOX1	65	94.009	ENSOCUG00000001205	-	96	94.009	Oryctolagus_cuniculus
ENSFALG00000004027	RBFOX1	97	94.427	ENSOGAG00000025535	RBFOX1	81	94.427	Otolemur_garnettii
ENSFALG00000004027	RBFOX1	73	82.716	ENSOARG00000005135	RBFOX1	96	82.716	Ovis_aries
ENSFALG00000004027	RBFOX1	100	92.793	ENSPPAG00000036238	-	88	92.570	Pan_paniscus
ENSFALG00000004027	RBFOX1	100	92.793	ENSPPRG00000006546	RBFOX1	78	92.793	Panthera_pardus
ENSFALG00000004027	RBFOX1	98	80.923	ENSPTIG00000021154	RBFOX1	82	79.755	Panthera_tigris_altaica
ENSFALG00000004027	RBFOX1	100	92.793	ENSPTRG00000007744	RBFOX1	78	92.793	Pan_troglodytes
ENSFALG00000004027	RBFOX1	100	92.793	ENSPANG00000026500	RBFOX1	86	88.379	Papio_anubis
ENSFALG00000004027	RBFOX1	89	84.512	ENSPKIG00000019353	rbfox1	87	84.407	Paramormyrops_kingsleyae
ENSFALG00000004027	RBFOX1	100	82.143	ENSPKIG00000009667	-	87	83.587	Paramormyrops_kingsleyae
ENSFALG00000004027	RBFOX1	97	99.381	ENSPSIG00000006523	RBFOX1	81	99.381	Pelodiscus_sinensis
ENSFALG00000004027	RBFOX1	100	91.592	ENSPEMG00000017607	Rbfox1	83	91.592	Peromyscus_maniculatus_bairdii
ENSFALG00000004027	RBFOX1	67	92.411	ENSPCIG00000026887	RBFOX1	77	92.411	Phascolarctos_cinereus
ENSFALG00000004027	RBFOX1	97	95.046	ENSPPYG00000007079	-	82	95.046	Pongo_abelii
ENSFALG00000004027	RBFOX1	97	83.642	ENSPCAG00000002630	RBFOX1	86	83.642	Procavia_capensis
ENSFALG00000004027	RBFOX1	100	92.192	ENSPCOG00000025687	RBFOX1	84	87.812	Propithecus_coquereli
ENSFALG00000004027	RBFOX1	90	90.698	ENSPVAG00000013467	RBFOX1	72	90.698	Pteropus_vampyrus
ENSFALG00000004027	RBFOX1	93	80.000	ENSPNAG00000023109	rbfox1	82	80.000	Pygocentrus_nattereri
ENSFALG00000004027	RBFOX1	97	93.498	ENSRNOG00000002827	Rbfox1	86	91.049	Rattus_norvegicus
ENSFALG00000004027	RBFOX1	97	95.046	ENSRBIG00000044478	RBFOX1	86	95.046	Rhinopithecus_bieti
ENSFALG00000004027	RBFOX1	100	92.793	ENSRROG00000044411	RBFOX1	89	95.364	Rhinopithecus_roxellana
ENSFALG00000004027	RBFOX1	100	92.192	ENSSBOG00000033726	RBFOX1	82	94.427	Saimiri_boliviensis_boliviensis
ENSFALG00000004027	RBFOX1	100	90.390	ENSSHAG00000009257	RBFOX1	87	86.538	Sarcophilus_harrisii
ENSFALG00000004027	RBFOX1	72	86.831	ENSSFOG00015023675	rbfox1	70	86.831	Scleropages_formosus
ENSFALG00000004027	RBFOX1	99	70.206	ENSSFOG00015009955	-	79	70.206	Scleropages_formosus
ENSFALG00000004027	RBFOX1	99	73.410	ENSSMAG00000015505	rbfox1	88	72.965	Scophthalmus_maximus
ENSFALG00000004027	RBFOX1	98	71.125	ENSSDUG00000016413	rbfox1	82	71.818	Seriola_dumerili
ENSFALG00000004027	RBFOX1	95	71.856	ENSSLDG00000009353	rbfox1	97	70.710	Seriola_lalandi_dorsalis
ENSFALG00000004027	RBFOX1	93	84.395	ENSSPUG00000009732	RBFOX1	80	84.395	Sphenodon_punctatus
ENSFALG00000004027	RBFOX1	97	74.118	ENSSPAG00000009723	rbfox1	83	73.824	Stegastes_partitus
ENSFALG00000004027	RBFOX1	97	94.427	ENSSSCG00000007917	RBFOX1	88	94.855	Sus_scrofa
ENSFALG00000004027	RBFOX1	97	100.000	ENSTGUG00000004562	RBFOX1	83	100.000	Taeniopygia_guttata
ENSFALG00000004027	RBFOX1	98	72.886	ENSTRUG00000020940	rbfox1	88	72.595	Takifugu_rubripes
ENSFALG00000004027	RBFOX1	72	55.208	ENSTNIG00000002567	rbfox1	90	56.944	Tetraodon_nigroviridis
ENSFALG00000004027	RBFOX1	72	74.380	ENSTBEG00000009169	-	58	74.380	Tupaia_belangeri
ENSFALG00000004027	RBFOX1	97	91.975	ENSTTRG00000005700	RBFOX1	78	91.975	Tursiops_truncatus
ENSFALG00000004027	RBFOX1	97	88.545	ENSUAMG00000024633	RBFOX1	81	89.474	Ursus_americanus
ENSFALG00000004027	RBFOX1	97	79.257	ENSUMAG00000003579	RBFOX1	80	79.257	Ursus_maritimus
ENSFALG00000004027	RBFOX1	72	92.975	ENSVPAG00000001284	RBFOX1	58	92.975	Vicugna_pacos
ENSFALG00000004027	RBFOX1	100	93.114	ENSVVUG00000017311	RBFOX1	86	95.356	Vulpes_vulpes