EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004214 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 4292 bases
Position: chrJH603176.1:9625387-9629678
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004386	RNA_ligase	PF09414.10	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004409	LIG4-201	3895	-	ENSFALP00000004386	822 (aa)	-	U3JNN2

Gene Model

Click here to download ENSFALG00000004214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004214	LIG4	98	76.753	ENSG00000174405	LIG4	89	76.753	Homo_sapiens
ENSFALG00000004214	LIG4	98	69.727	ENSAPOG00000000866	lig4	88	69.727	Acanthochromis_polyacanthus
ENSFALG00000004214	LIG4	99	73.833	ENSAMEG00000019685	LIG4	89	73.833	Ailuropoda_melanoleuca
ENSFALG00000004214	LIG4	97	69.925	ENSACIG00000018309	lig4	87	69.925	Amphilophus_citrinellus
ENSFALG00000004214	LIG4	98	69.107	ENSAOCG00000011768	lig4	88	69.107	Amphiprion_ocellaris
ENSFALG00000004214	LIG4	98	69.231	ENSAPEG00000017815	lig4	88	69.231	Amphiprion_percula
ENSFALG00000004214	LIG4	98	68.897	ENSATEG00000005583	lig4	89	68.897	Anabas_testudineus
ENSFALG00000004214	LIG4	96	90.355	ENSAPLG00000001673	LIG4	90	90.355	Anas_platyrhynchos
ENSFALG00000004214	LIG4	98	81.491	ENSACAG00000014566	LIG4	89	81.491	Anolis_carolinensis
ENSFALG00000004214	LIG4	98	75.400	ENSANAG00000012446	LIG4	89	75.400	Aotus_nancymaae
ENSFALG00000004214	LIG4	98	68.936	ENSACLG00000027051	lig4	89	68.936	Astatotilapia_calliptera
ENSFALG00000004214	LIG4	94	69.728	ENSAMXG00000008192	lig4	80	69.728	Astyanax_mexicanus
ENSFALG00000004214	LIG4	99	75.245	ENSBTAG00000015868	LIG4	94	75.713	Bos_taurus
ENSFALG00000004214	LIG4	98	75.154	ENSCJAG00000014689	LIG4	89	75.154	Callithrix_jacchus
ENSFALG00000004214	LIG4	98	75.031	ENSCAFG00000006031	LIG4	89	75.031	Canis_familiaris
ENSFALG00000004214	LIG4	98	75.031	ENSCAFG00020021230	LIG4	89	75.031	Canis_lupus_dingo
ENSFALG00000004214	LIG4	98	75.124	ENSCHIG00000001019	LIG4	88	75.124	Capra_hircus
ENSFALG00000004214	LIG4	97	76.250	ENSCAPG00000006284	LIG4	88	76.250	Cavia_aperea
ENSFALG00000004214	LIG4	98	75.400	ENSCPOG00000014266	LIG4	89	75.400	Cavia_porcellus
ENSFALG00000004214	LIG4	98	75.400	ENSCCAG00000019971	LIG4	89	75.400	Cebus_capucinus
ENSFALG00000004214	LIG4	97	75.995	ENSCATG00000021075	LIG4	88	75.995	Cercocebus_atys
ENSFALG00000004214	LIG4	98	74.908	ENSCLAG00000003376	LIG4	89	74.908	Chinchilla_lanigera
ENSFALG00000004214	LIG4	98	75.646	ENSCSAG00000000211	LIG4	89	75.646	Chlorocebus_sabaeus
ENSFALG00000004214	LIG4	97	83.706	ENSCPBG00000023291	LIG4	89	83.313	Chrysemys_picta_bellii
ENSFALG00000004214	LIG4	76	45.800	ENSCING00000009536	-	96	45.800	Ciona_intestinalis
ENSFALG00000004214	LIG4	92	45.204	ENSCSAVG00000010336	-	98	45.204	Ciona_savignyi
ENSFALG00000004214	LIG4	98	75.277	ENSCANG00000005805	LIG4	89	75.277	Colobus_angolensis_palliatus
ENSFALG00000004214	LIG4	98	74.201	ENSCGRG00001012072	Lig4	89	74.201	Cricetulus_griseus_chok1gshd
ENSFALG00000004214	LIG4	98	74.201	ENSCGRG00000013417	Lig4	89	74.201	Cricetulus_griseus_crigri
ENSFALG00000004214	LIG4	97	69.057	ENSCSEG00000013905	lig4	86	69.057	Cynoglossus_semilaevis
ENSFALG00000004214	LIG4	98	69.307	ENSCVAG00000007896	lig4	89	69.307	Cyprinodon_variegatus
ENSFALG00000004214	LIG4	98	67.203	ENSDARG00000060620	lig4	89	67.203	Danio_rerio
ENSFALG00000004214	LIG4	98	75.184	ENSDNOG00000000513	LIG4	89	75.184	Dasypus_novemcinctus
ENSFALG00000004214	LIG4	97	77.029	ENSDORG00000027303	Lig4	88	77.029	Dipodomys_ordii
ENSFALG00000004214	LIG4	93	32.099	FBgn0030506	Lig4	86	32.099	Drosophila_melanogaster
ENSFALG00000004214	LIG4	96	72.966	ENSETEG00000015563	LIG4	89	73.342	Echinops_telfairi
ENSFALG00000004214	LIG4	97	46.163	ENSEBUG00000014243	lig4	87	46.163	Eptatretus_burgeri
ENSFALG00000004214	LIG4	98	74.908	ENSEASG00005022073	LIG4	89	74.908	Equus_asinus_asinus
ENSFALG00000004214	LIG4	98	74.662	ENSECAG00000003257	LIG4	89	74.662	Equus_caballus
ENSFALG00000004214	LIG4	96	69.472	ENSELUG00000006787	lig4	87	69.472	Esox_lucius
ENSFALG00000004214	LIG4	98	74.473	ENSFCAG00000031985	LIG4	89	74.473	Felis_catus
ENSFALG00000004214	LIG4	98	75.031	ENSFDAG00000008973	LIG4	89	75.031	Fukomys_damarensis
ENSFALG00000004214	LIG4	98	68.889	ENSFHEG00000007398	lig4	80	68.727	Fundulus_heteroclitus
ENSFALG00000004214	LIG4	94	63.835	ENSGMOG00000012843	lig4	99	63.835	Gadus_morhua
ENSFALG00000004214	LIG4	99	90.752	ENSGALG00000016854	LIG4	89	90.752	Gallus_gallus
ENSFALG00000004214	LIG4	94	71.391	ENSGAFG00000019779	lig4	85	69.259	Gambusia_affinis
ENSFALG00000004214	LIG4	98	66.914	ENSGACG00000014135	lig4	88	66.914	Gasterosteus_aculeatus
ENSFALG00000004214	LIG4	98	76.507	ENSGGOG00000027771	LIG4	89	76.507	Gorilla_gorilla
ENSFALG00000004214	LIG4	98	68.812	ENSHBUG00000006245	lig4	89	68.812	Haplochromis_burtoni
ENSFALG00000004214	LIG4	98	74.785	ENSHGLG00000000718	LIG4	89	74.785	Heterocephalus_glaber_female
ENSFALG00000004214	LIG4	98	74.785	ENSHGLG00100003265	LIG4	89	74.785	Heterocephalus_glaber_male
ENSFALG00000004214	LIG4	98	68.579	ENSHCOG00000012010	lig4	88	68.579	Hippocampus_comes
ENSFALG00000004214	LIG4	98	69.183	ENSIPUG00000013748	lig4	89	69.183	Ictalurus_punctatus
ENSFALG00000004214	LIG4	98	74.257	ENSSTOG00000024303	LIG4	88	74.257	Ictidomys_tridecemlineatus
ENSFALG00000004214	LIG4	98	74.047	ENSJJAG00000006750	Lig4	89	74.047	Jaculus_jaculus
ENSFALG00000004214	LIG4	97	68.428	ENSKMAG00000001149	lig4	87	68.428	Kryptolebias_marmoratus
ENSFALG00000004214	LIG4	88	69.793	ENSLBEG00000014578	lig4	88	69.793	Labrus_bergylta
ENSFALG00000004214	LIG4	98	74.815	ENSLACG00000003282	LIG4	89	74.815	Latimeria_chalumnae
ENSFALG00000004214	LIG4	98	73.153	ENSLOCG00000008901	lig4	88	73.153	Lepisosteus_oculatus
ENSFALG00000004214	LIG4	98	74.321	ENSLAFG00000031152	LIG4	88	74.321	Loxodonta_africana
ENSFALG00000004214	LIG4	98	75.523	ENSMFAG00000037235	LIG4	89	75.523	Macaca_fascicularis
ENSFALG00000004214	LIG4	98	75.523	ENSMMUG00000008874	LIG4	89	75.523	Macaca_mulatta
ENSFALG00000004214	LIG4	98	75.523	ENSMNEG00000023575	LIG4	89	75.523	Macaca_nemestrina
ENSFALG00000004214	LIG4	98	75.523	ENSMLEG00000026720	LIG4	89	75.523	Mandrillus_leucophaeus
ENSFALG00000004214	LIG4	98	69.451	ENSMAMG00000008472	lig4	87	69.451	Mastacembelus_armatus
ENSFALG00000004214	LIG4	98	68.936	ENSMZEG00005001855	lig4	89	68.936	Maylandia_zebra
ENSFALG00000004214	LIG4	99	91.615	ENSMGAG00000015532	LIG4	89	91.615	Meleagris_gallopavo
ENSFALG00000004214	LIG4	98	74.047	ENSMOCG00000019000	Lig4	89	74.047	Microtus_ochrogaster
ENSFALG00000004214	LIG4	97	68.176	ENSMMOG00000004390	lig4	87	68.176	Mola_mola
ENSFALG00000004214	LIG4	98	77.047	ENSMODG00000025064	LIG4	88	77.447	Monodelphis_domestica
ENSFALG00000004214	LIG4	97	68.931	ENSMALG00000008555	lig4	88	68.931	Monopterus_albus
ENSFALG00000004214	LIG4	98	74.662	MGP_CAROLIEiJ_G0030809	Lig4	89	74.662	Mus_caroli
ENSFALG00000004214	LIG4	98	74.416	ENSMUSG00000049717	Lig4	89	74.416	Mus_musculus
ENSFALG00000004214	LIG4	98	75.154	MGP_PahariEiJ_G0021270	Lig4	89	75.154	Mus_pahari
ENSFALG00000004214	LIG4	98	74.293	MGP_SPRETEiJ_G0031917	Lig4	89	74.293	Mus_spretus
ENSFALG00000004214	LIG4	98	75.092	ENSMPUG00000018675	LIG4	89	75.092	Mustela_putorius_furo
ENSFALG00000004214	LIG4	98	75.523	ENSMLUG00000001267	LIG4	89	75.523	Myotis_lucifugus
ENSFALG00000004214	LIG4	98	74.134	ENSNGAG00000013258	Lig4	88	74.134	Nannospalax_galili
ENSFALG00000004214	LIG4	98	68.564	ENSNBRG00000021252	lig4	89	68.564	Neolamprologus_brichardi
ENSFALG00000004214	LIG4	99	75.735	ENSNLEG00000007888	LIG4	89	75.735	Nomascus_leucogenys
ENSFALG00000004214	LIG4	98	73.432	ENSOPRG00000005765	LIG4	89	73.432	Ochotona_princeps
ENSFALG00000004214	LIG4	98	75.277	ENSODEG00000019683	LIG4	89	75.277	Octodon_degus
ENSFALG00000004214	LIG4	98	68.564	ENSONIG00000011969	lig4	88	68.564	Oreochromis_niloticus
ENSFALG00000004214	LIG4	98	74.047	ENSOCUG00000015734	LIG4	89	74.047	Oryctolagus_cuniculus
ENSFALG00000004214	LIG4	98	68.401	ENSORLG00000004041	lig4	88	68.649	Oryzias_latipes
ENSFALG00000004214	LIG4	98	68.688	ENSORLG00020019607	lig4	88	68.936	Oryzias_latipes_hni
ENSFALG00000004214	LIG4	98	68.441	ENSORLG00015017754	lig4	88	68.688	Oryzias_latipes_hsok
ENSFALG00000004214	LIG4	84	70.203	ENSOMEG00000003459	lig4	99	70.203	Oryzias_melastigma
ENSFALG00000004214	LIG4	98	74.416	ENSOGAG00000032120	LIG4	89	74.416	Otolemur_garnettii
ENSFALG00000004214	LIG4	91	76.800	ENSOARG00000005590	LIG4	98	76.800	Ovis_aries
ENSFALG00000004214	LIG4	98	76.138	ENSPPAG00000032998	LIG4	89	76.138	Pan_paniscus
ENSFALG00000004214	LIG4	98	75.093	ENSPPRG00000017804	LIG4	89	75.093	Panthera_pardus
ENSFALG00000004214	LIG4	98	74.969	ENSPTIG00000010051	LIG4	89	74.969	Panthera_tigris_altaica
ENSFALG00000004214	LIG4	98	76.261	ENSPTRG00000006025	LIG4	89	76.261	Pan_troglodytes
ENSFALG00000004214	LIG4	97	76.119	ENSPANG00000007562	LIG4	88	76.119	Papio_anubis
ENSFALG00000004214	LIG4	98	69.279	ENSPKIG00000011645	lig4	87	69.279	Paramormyrops_kingsleyae
ENSFALG00000004214	LIG4	99	83.395	ENSPSIG00000001504	LIG4	89	83.395	Pelodiscus_sinensis
ENSFALG00000004214	LIG4	96	67.929	ENSPMGG00000013486	lig4	88	67.244	Periophthalmus_magnuspinnatus
ENSFALG00000004214	LIG4	98	75.184	ENSPEMG00000000076	Lig4	89	75.184	Peromyscus_maniculatus_bairdii
ENSFALG00000004214	LIG4	99	76.867	ENSPCIG00000021882	LIG4	89	76.867	Phascolarctos_cinereus
ENSFALG00000004214	LIG4	96	70.328	ENSPFOG00000000797	lig4	88	69.554	Poecilia_formosa
ENSFALG00000004214	LIG4	96	70.328	ENSPLAG00000001196	lig4	88	69.554	Poecilia_latipinna
ENSFALG00000004214	LIG4	96	70.455	ENSPMEG00000021353	lig4	88	69.678	Poecilia_mexicana
ENSFALG00000004214	LIG4	96	70.328	ENSPREG00000007323	lig4	88	69.554	Poecilia_reticulata
ENSFALG00000004214	LIG4	98	75.769	ENSPPYG00000005540	LIG4	89	75.769	Pongo_abelii
ENSFALG00000004214	LIG4	98	74.293	ENSPVAG00000016403	LIG4	89	74.293	Pteropus_vampyrus
ENSFALG00000004214	LIG4	97	69.686	ENSPNYG00000009660	lig4	87	69.686	Pundamilia_nyererei
ENSFALG00000004214	LIG4	97	68.931	ENSPNAG00000028069	LIG4	88	68.931	Pygocentrus_nattereri
ENSFALG00000004214	LIG4	97	68.931	ENSPNAG00000028056	lig4	88	68.931	Pygocentrus_nattereri
ENSFALG00000004214	LIG4	98	73.801	ENSRNOG00000014605	Lig4	89	73.801	Rattus_norvegicus
ENSFALG00000004214	LIG4	98	73.924	ENSRBIG00000039962	LIG4	89	73.924	Rhinopithecus_bieti
ENSFALG00000004214	LIG4	98	75.154	ENSRROG00000006040	LIG4	89	75.154	Rhinopithecus_roxellana
ENSFALG00000004214	LIG4	98	75.277	ENSSBOG00000019029	LIG4	89	75.277	Saimiri_boliviensis_boliviensis
ENSFALG00000004214	LIG4	98	74.170	ENSSHAG00000009525	LIG4	88	74.816	Sarcophilus_harrisii
ENSFALG00000004214	LIG4	98	68.199	ENSSFOG00015012835	lig4	88	68.199	Scleropages_formosus
ENSFALG00000004214	LIG4	94	68.442	ENSSMAG00000011267	lig4	87	68.442	Scophthalmus_maximus
ENSFALG00000004214	LIG4	98	68.395	ENSSDUG00000010343	lig4	88	68.681	Seriola_dumerili
ENSFALG00000004214	LIG4	96	68.193	ENSSLDG00000003239	lig4	89	66.790	Seriola_lalandi_dorsalis
ENSFALG00000004214	LIG4	98	72.672	ENSSARG00000006573	LIG4	89	72.672	Sorex_araneus
ENSFALG00000004214	LIG4	90	82.656	ENSSPUG00000002444	LIG4	88	82.656	Sphenodon_punctatus
ENSFALG00000004214	LIG4	98	68.742	ENSSPAG00000001609	lig4	88	68.742	Stegastes_partitus
ENSFALG00000004214	LIG4	98	75.646	ENSSSCG00000009540	LIG4	89	75.646	Sus_scrofa
ENSFALG00000004214	LIG4	99	94.103	ENSTGUG00000010795	LIG4	90	94.103	Taeniopygia_guttata
ENSFALG00000004214	LIG4	98	68.317	ENSTRUG00000009984	lig4	89	68.317	Takifugu_rubripes
ENSFALG00000004214	LIG4	95	68.535	ENSTNIG00000010348	lig4	87	68.790	Tetraodon_nigroviridis
ENSFALG00000004214	LIG4	98	75.400	ENSTBEG00000017741	LIG4	89	75.400	Tupaia_belangeri
ENSFALG00000004214	LIG4	98	74.293	ENSTTRG00000012660	LIG4	89	74.293	Tursiops_truncatus
ENSFALG00000004214	LIG4	98	73.613	ENSUAMG00000003773	LIG4	89	73.613	Ursus_americanus
ENSFALG00000004214	LIG4	98	74.321	ENSXETG00000002654	lig4	89	74.321	Xenopus_tropicalis
ENSFALG00000004214	LIG4	96	70.202	ENSXCOG00000017401	lig4	88	69.517	Xiphophorus_couchianus
ENSFALG00000004214	LIG4	96	70.455	ENSXMAG00000015142	lig4	88	69.765	Xiphophorus_maculatus