EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004328 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 15046 bases
Position: chrJH603203.1:6846351-6861396
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004509	MMR_HSR1	PF01926.23	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004533	SRL-201	2115	-	ENSFALP00000004509	704 (aa)	-	U3JP05

Gene Model

Click here to download ENSFALG00000004328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004328	SRL	64	90.487	ENSG00000185739	SRL	99	92.075	Homo_sapiens
ENSFALG00000004328	SRL	63	75.839	ENSAPOG00000012432	SRL	99	75.839	Acanthochromis_polyacanthus
ENSFALG00000004328	SRL	64	82.040	ENSAPOG00000018093	srl	99	82.766	Acanthochromis_polyacanthus
ENSFALG00000004328	SRL	66	89.700	ENSAMEG00000010862	SRL	53	89.700	Ailuropoda_melanoleuca
ENSFALG00000004328	SRL	63	83.636	ENSACIG00000015799	srl	99	82.483	Amphilophus_citrinellus
ENSFALG00000004328	SRL	63	75.391	ENSACIG00000015419	SRL	99	75.391	Amphilophus_citrinellus
ENSFALG00000004328	SRL	61	83.796	ENSAOCG00000007574	srl	99	83.796	Amphiprion_ocellaris
ENSFALG00000004328	SRL	63	75.670	ENSAOCG00000017049	SRL	97	75.670	Amphiprion_ocellaris
ENSFALG00000004328	SRL	64	82.262	ENSAPEG00000006911	srl	96	82.262	Amphiprion_percula
ENSFALG00000004328	SRL	63	72.036	ENSAPEG00000006533	SRL	97	72.768	Amphiprion_percula
ENSFALG00000004328	SRL	68	68.421	ENSATEG00000009643	SRL	55	68.826	Anabas_testudineus
ENSFALG00000004328	SRL	63	83.636	ENSATEG00000024315	srl	93	83.636	Anabas_testudineus
ENSFALG00000004328	SRL	63	90.949	ENSACAG00000016380	SRL	85	89.871	Anolis_carolinensis
ENSFALG00000004328	SRL	63	73.068	ENSACLG00000024674	SRL	55	75.430	Astatotilapia_calliptera
ENSFALG00000004328	SRL	63	83.636	ENSACLG00000027685	srl	96	83.636	Astatotilapia_calliptera
ENSFALG00000004328	SRL	59	77.053	ENSAMXG00000038693	SRL	99	72.727	Astyanax_mexicanus
ENSFALG00000004328	SRL	64	81.250	ENSAMXG00000018789	srl	88	81.111	Astyanax_mexicanus
ENSFALG00000004328	SRL	64	90.529	ENSBTAG00000001078	SRL	57	90.529	Bos_taurus
ENSFALG00000004328	SRL	63	91.591	ENSCJAG00000019750	SRL	96	90.487	Callithrix_jacchus
ENSFALG00000004328	SRL	64	91.150	ENSCAFG00000019233	SRL	84	91.150	Canis_familiaris
ENSFALG00000004328	SRL	65	90.196	ENSCAFG00020025024	SRL	57	90.196	Canis_lupus_dingo
ENSFALG00000004328	SRL	65	90.351	ENSCHIG00000017927	SRL	57	90.529	Capra_hircus
ENSFALG00000004328	SRL	64	91.372	ENSTSYG00000007919	SRL	99	93.007	Carlito_syrichta
ENSFALG00000004328	SRL	64	90.687	ENSCPOG00000012643	SRL	96	90.687	Cavia_porcellus
ENSFALG00000004328	SRL	63	85.682	ENSCCAG00000032646	SRL	99	92.328	Cebus_capucinus
ENSFALG00000004328	SRL	91	71.846	ENSCATG00000032227	-	96	90.487	Cercocebus_atys
ENSFALG00000004328	SRL	64	90.909	ENSCLAG00000016242	SRL	96	90.508	Chinchilla_lanigera
ENSFALG00000004328	SRL	55	92.746	ENSCHOG00000001618	SRL	52	92.746	Choloepus_hoffmanni
ENSFALG00000004328	SRL	72	92.732	ENSCPBG00000026371	SRL	96	90.733	Chrysemys_picta_bellii
ENSFALG00000004328	SRL	62	59.361	ENSCING00000005231	-	93	61.058	Ciona_intestinalis
ENSFALG00000004328	SRL	64	90.265	ENSCANG00000035872	SRL	99	92.075	Colobus_angolensis_palliatus
ENSFALG00000004328	SRL	64	90.244	ENSCGRG00001016630	Srl	96	89.845	Cricetulus_griseus_chok1gshd
ENSFALG00000004328	SRL	64	90.244	ENSCGRG00000005458	Srl	96	89.845	Cricetulus_griseus_crigri
ENSFALG00000004328	SRL	64	70.354	ENSCSEG00000011866	SRL	91	70.354	Cynoglossus_semilaevis
ENSFALG00000004328	SRL	63	84.091	ENSCSEG00000016151	srl	99	80.819	Cynoglossus_semilaevis
ENSFALG00000004328	SRL	63	84.091	ENSCVAG00000003513	srl	95	84.091	Cyprinodon_variegatus
ENSFALG00000004328	SRL	79	62.799	ENSCVAG00000022465	SRL	59	74.444	Cyprinodon_variegatus
ENSFALG00000004328	SRL	54	76.501	ENSDARG00000112959	CABZ01072309.1	99	76.501	Danio_rerio
ENSFALG00000004328	SRL	63	83.864	ENSDARG00000104587	srl	94	83.864	Danio_rerio
ENSFALG00000004328	SRL	63	91.591	ENSDNOG00000011643	SRL	54	90.066	Dasypus_novemcinctus
ENSFALG00000004328	SRL	64	90.244	ENSDORG00000014807	Srl	96	89.845	Dipodomys_ordii
ENSFALG00000004328	SRL	52	65.160	ENSEBUG00000015937	srl	95	65.160	Eptatretus_burgeri
ENSFALG00000004328	SRL	64	91.574	ENSEASG00005000942	SRL	58	87.708	Equus_asinus_asinus
ENSFALG00000004328	SRL	64	91.778	ENSECAG00000024219	SRL	96	91.611	Equus_caballus
ENSFALG00000004328	SRL	64	79.229	ENSELUG00000015616	srl	96	79.229	Esox_lucius
ENSFALG00000004328	SRL	63	92.273	ENSFCAG00000022075	SRL	96	91.372	Felis_catus
ENSFALG00000004328	SRL	64	91.131	ENSFDAG00000006199	SRL	96	90.728	Fukomys_damarensis
ENSFALG00000004328	SRL	63	75.615	ENSFHEG00000011854	SRL	99	75.615	Fundulus_heteroclitus
ENSFALG00000004328	SRL	63	83.182	ENSFHEG00000011239	srl	99	80.260	Fundulus_heteroclitus
ENSFALG00000004328	SRL	63	80.310	ENSGMOG00000014954	srl	99	80.310	Gadus_morhua
ENSFALG00000004328	SRL	99	68.193	ENSGALG00000038884	SRL	96	97.345	Gallus_gallus
ENSFALG00000004328	SRL	63	76.364	ENSGAFG00000016984	SRL	98	76.364	Gambusia_affinis
ENSFALG00000004328	SRL	63	83.864	ENSGAFG00000000010	srl	98	82.483	Gambusia_affinis
ENSFALG00000004328	SRL	63	80.531	ENSGACG00000011332	srl	99	80.531	Gasterosteus_aculeatus
ENSFALG00000004328	SRL	99	67.514	ENSGGOG00000011312	-	96	90.487	Gorilla_gorilla
ENSFALG00000004328	SRL	63	83.636	ENSHBUG00000007581	srl	96	83.636	Haplochromis_burtoni
ENSFALG00000004328	SRL	63	72.848	ENSHBUG00000015710	SRL	56	73.068	Haplochromis_burtoni
ENSFALG00000004328	SRL	64	91.353	ENSHGLG00000015271	SRL	96	90.949	Heterocephalus_glaber_female
ENSFALG00000004328	SRL	64	91.353	ENSHGLG00100019378	SRL	96	90.949	Heterocephalus_glaber_male
ENSFALG00000004328	SRL	63	72.062	ENSHCOG00000001012	SRL	50	71.840	Hippocampus_comes
ENSFALG00000004328	SRL	63	83.636	ENSHCOG00000008687	srl	98	83.636	Hippocampus_comes
ENSFALG00000004328	SRL	64	80.804	ENSIPUG00000012513	srl	96	80.804	Ictalurus_punctatus
ENSFALG00000004328	SRL	60	70.922	ENSIPUG00000011609	SRL	92	70.922	Ictalurus_punctatus
ENSFALG00000004328	SRL	66	89.032	ENSSTOG00000021151	-	96	90.287	Ictidomys_tridecemlineatus
ENSFALG00000004328	SRL	64	90.466	ENSJJAG00000016400	Srl	96	90.066	Jaculus_jaculus
ENSFALG00000004328	SRL	63	83.220	ENSKMAG00000014115	srl	92	86.124	Kryptolebias_marmoratus
ENSFALG00000004328	SRL	63	75.909	ENSKMAG00000019537	SRL	99	75.909	Kryptolebias_marmoratus
ENSFALG00000004328	SRL	63	74.720	ENSLBEG00000013811	SRL	97	74.720	Labrus_bergylta
ENSFALG00000004328	SRL	64	81.333	ENSLBEG00000026643	srl	96	81.333	Labrus_bergylta
ENSFALG00000004328	SRL	64	85.366	ENSLACG00000002825	SRL	99	85.366	Latimeria_chalumnae
ENSFALG00000004328	SRL	64	84.922	ENSLOCG00000002644	srl	96	84.922	Lepisosteus_oculatus
ENSFALG00000004328	SRL	87	72.625	ENSLAFG00000006329	SRL	53	89.032	Loxodonta_africana
ENSFALG00000004328	SRL	61	92.075	ENSMFAG00000037383	SRL	99	92.075	Macaca_fascicularis
ENSFALG00000004328	SRL	91	69.242	ENSMNEG00000019236	-	96	90.265	Macaca_nemestrina
ENSFALG00000004328	SRL	64	82.743	ENSMLEG00000032156	SRL	95	82.743	Mandrillus_leucophaeus
ENSFALG00000004328	SRL	63	83.409	ENSMAMG00000023322	srl	93	83.409	Mastacembelus_armatus
ENSFALG00000004328	SRL	63	72.985	ENSMAMG00000013756	SRL	54	72.985	Mastacembelus_armatus
ENSFALG00000004328	SRL	63	83.636	ENSMZEG00005004548	srl	96	83.636	Maylandia_zebra
ENSFALG00000004328	SRL	63	73.068	ENSMZEG00005004010	SRL	57	73.289	Maylandia_zebra
ENSFALG00000004328	SRL	81	79.863	ENSMGAG00000009342	SRL	95	97.872	Meleagris_gallopavo
ENSFALG00000004328	SRL	87	73.108	ENSMICG00000032307	SRL	96	90.929	Microcebus_murinus
ENSFALG00000004328	SRL	64	89.579	ENSMOCG00000008208	Srl	96	89.183	Microtus_ochrogaster
ENSFALG00000004328	SRL	63	71.554	ENSMMOG00000021572	SRL	99	71.554	Mola_mola
ENSFALG00000004328	SRL	64	82.143	ENSMMOG00000013970	srl	99	82.143	Mola_mola
ENSFALG00000004328	SRL	66	90.065	ENSMODG00000016380	-	52	90.065	Monodelphis_domestica
ENSFALG00000004328	SRL	59	75.904	ENSMALG00000000670	SRL	97	75.904	Monopterus_albus
ENSFALG00000004328	SRL	63	82.844	ENSMALG00000005039	srl	98	82.844	Monopterus_albus
ENSFALG00000004328	SRL	64	90.466	MGP_CAROLIEiJ_G0020400	Srl	96	90.066	Mus_caroli
ENSFALG00000004328	SRL	64	90.466	ENSMUSG00000022519	Srl	96	90.066	Mus_musculus
ENSFALG00000004328	SRL	65	87.879	MGP_PahariEiJ_G0016108	Srl	50	88.387	Mus_pahari
ENSFALG00000004328	SRL	64	90.466	MGP_SPRETEiJ_G0021294	Srl	96	90.066	Mus_spretus
ENSFALG00000004328	SRL	88	72.930	ENSMPUG00000015025	SRL	56	89.827	Mustela_putorius_furo
ENSFALG00000004328	SRL	92	70.588	ENSMLUG00000030733	SRL	57	90.351	Myotis_lucifugus
ENSFALG00000004328	SRL	64	90.022	ENSNGAG00000019741	Srl	96	89.625	Nannospalax_galili
ENSFALG00000004328	SRL	83	58.824	ENSNBRG00000002422	SRL	58	72.160	Neolamprologus_brichardi
ENSFALG00000004328	SRL	63	83.409	ENSNBRG00000023775	srl	96	82.262	Neolamprologus_brichardi
ENSFALG00000004328	SRL	64	84.035	ENSNLEG00000029051	SRL	95	84.035	Nomascus_leucogenys
ENSFALG00000004328	SRL	64	84.106	ENSOPRG00000000477	-	53	84.106	Ochotona_princeps
ENSFALG00000004328	SRL	64	90.244	ENSODEG00000013256	SRL	96	89.845	Octodon_degus
ENSFALG00000004328	SRL	63	83.409	ENSONIG00000005192	srl	93	83.409	Oreochromis_niloticus
ENSFALG00000004328	SRL	66	88.817	ENSOCUG00000025140	SRL	51	88.817	Oryctolagus_cuniculus
ENSFALG00000004328	SRL	63	83.409	ENSORLG00000008291	srl	91	86.788	Oryzias_latipes
ENSFALG00000004328	SRL	63	74.944	ENSORLG00000015064	SRL	98	74.944	Oryzias_latipes
ENSFALG00000004328	SRL	63	75.168	ENSORLG00020018173	SRL	98	75.168	Oryzias_latipes_hni
ENSFALG00000004328	SRL	63	82.955	ENSORLG00020019784	srl	79	86.269	Oryzias_latipes_hni
ENSFALG00000004328	SRL	63	75.391	ENSORLG00015019063	SRL	98	75.391	Oryzias_latipes_hsok
ENSFALG00000004328	SRL	63	82.500	ENSORLG00015009342	srl	91	82.500	Oryzias_latipes_hsok
ENSFALG00000004328	SRL	63	72.826	ENSOMEG00000005682	SRL	53	73.043	Oryzias_melastigma
ENSFALG00000004328	SRL	63	82.727	ENSOMEG00000010006	srl	99	82.022	Oryzias_melastigma
ENSFALG00000004328	SRL	66	89.247	ENSOGAG00000029266	SRL	57	89.247	Otolemur_garnettii
ENSFALG00000004328	SRL	64	90.728	ENSOARG00000003074	SRL	57	90.351	Ovis_aries
ENSFALG00000004328	SRL	99	67.742	ENSPPAG00000024919	-	99	92.075	Pan_paniscus
ENSFALG00000004328	SRL	63	92.500	ENSPPRG00000010274	SRL	99	93.007	Panthera_pardus
ENSFALG00000004328	SRL	63	92.500	ENSPTIG00000015162	SRL	99	93.007	Panthera_tigris_altaica
ENSFALG00000004328	SRL	99	67.742	ENSPTRG00000007712	SRL	99	92.075	Pan_troglodytes
ENSFALG00000004328	SRL	64	90.110	ENSPANG00000013804	SRL	98	90.110	Papio_anubis
ENSFALG00000004328	SRL	92	59.049	ENSPKIG00000024974	SRL	88	76.136	Paramormyrops_kingsleyae
ENSFALG00000004328	SRL	64	82.040	ENSPKIG00000006405	srl	96	81.858	Paramormyrops_kingsleyae
ENSFALG00000004328	SRL	87	73.858	ENSPSIG00000008586	SRL	51	91.429	Pelodiscus_sinensis
ENSFALG00000004328	SRL	63	72.500	ENSPMGG00000023505	-	99	72.500	Periophthalmus_magnuspinnatus
ENSFALG00000004328	SRL	65	82.198	ENSPMGG00000021081	srl	98	82.198	Periophthalmus_magnuspinnatus
ENSFALG00000004328	SRL	64	89.800	ENSPEMG00000015842	Srl	96	89.404	Peromyscus_maniculatus_bairdii
ENSFALG00000004328	SRL	60	68.807	ENSPMAG00000004786	srl	99	68.807	Petromyzon_marinus
ENSFALG00000004328	SRL	65	90.372	ENSPCIG00000012128	SRL	100	90.372	Phascolarctos_cinereus
ENSFALG00000004328	SRL	63	81.637	ENSPFOG00000011408	srl	96	80.258	Poecilia_formosa
ENSFALG00000004328	SRL	63	75.227	ENSPLAG00000002932	SRL	98	75.227	Poecilia_latipinna
ENSFALG00000004328	SRL	64	82.262	ENSPLAG00000008017	srl	98	82.262	Poecilia_latipinna
ENSFALG00000004328	SRL	63	83.636	ENSPMEG00000006745	srl	98	82.262	Poecilia_mexicana
ENSFALG00000004328	SRL	63	73.289	ENSPMEG00000005890	SRL	59	73.731	Poecilia_mexicana
ENSFALG00000004328	SRL	63	83.409	ENSPREG00000007751	srl	98	83.409	Poecilia_reticulata
ENSFALG00000004328	SRL	64	75.446	ENSPREG00000000315	SRL	99	75.446	Poecilia_reticulata
ENSFALG00000004328	SRL	59	92.584	ENSPPYG00000007053	SRL	97	92.584	Pongo_abelii
ENSFALG00000004328	SRL	70	86.382	ENSPCAG00000003378	-	55	86.382	Procavia_capensis
ENSFALG00000004328	SRL	64	90.929	ENSPCOG00000023135	SRL	99	92.774	Propithecus_coquereli
ENSFALG00000004328	SRL	64	91.150	ENSPVAG00000006586	SRL	61	84.970	Pteropus_vampyrus
ENSFALG00000004328	SRL	63	83.636	ENSPNYG00000001200	srl	96	83.636	Pundamilia_nyererei
ENSFALG00000004328	SRL	63	73.068	ENSPNYG00000003423	SRL	56	73.289	Pundamilia_nyererei
ENSFALG00000004328	SRL	63	73.991	ENSPNAG00000007361	-	92	73.991	Pygocentrus_nattereri
ENSFALG00000004328	SRL	64	81.696	ENSPNAG00000023106	srl	96	81.556	Pygocentrus_nattereri
ENSFALG00000004328	SRL	65	88.793	ENSRNOG00000005269	Srl	51	88.793	Rattus_norvegicus
ENSFALG00000004328	SRL	66	89.032	ENSRBIG00000042358	SRL	52	89.032	Rhinopithecus_bieti
ENSFALG00000004328	SRL	63	91.591	ENSSBOG00000029273	SRL	96	90.487	Saimiri_boliviensis_boliviensis
ENSFALG00000004328	SRL	65	90.611	ENSSHAG00000011715	-	51	91.170	Sarcophilus_harrisii
ENSFALG00000004328	SRL	63	76.591	ENSSFOG00015021327	SRL	56	69.860	Scleropages_formosus
ENSFALG00000004328	SRL	63	84.091	ENSSFOG00015009773	srl	97	82.522	Scleropages_formosus
ENSFALG00000004328	SRL	64	81.250	ENSSMAG00000016274	srl	98	81.250	Scophthalmus_maximus
ENSFALG00000004328	SRL	64	73.626	ENSSDUG00000009161	SRL	99	73.626	Seriola_dumerili
ENSFALG00000004328	SRL	63	83.864	ENSSDUG00000010808	srl	97	83.864	Seriola_dumerili
ENSFALG00000004328	SRL	63	83.864	ENSSLDG00000022024	srl	95	83.864	Seriola_lalandi_dorsalis
ENSFALG00000004328	SRL	63	73.951	ENSSLDG00000014601	SRL	99	74.172	Seriola_lalandi_dorsalis
ENSFALG00000004328	SRL	64	92.257	ENSSPUG00000016859	SRL	99	92.257	Sphenodon_punctatus
ENSFALG00000004328	SRL	63	83.636	ENSSPAG00000019105	srl	96	82.262	Stegastes_partitus
ENSFALG00000004328	SRL	63	75.839	ENSSPAG00000014254	SRL	99	75.839	Stegastes_partitus
ENSFALG00000004328	SRL	63	91.610	ENSSSCG00000007949	SRL	99	90.604	Sus_scrofa
ENSFALG00000004328	SRL	51	98.343	ENSTGUG00000016121	-	100	98.343	Taeniopygia_guttata
ENSFALG00000004328	SRL	64	99.779	ENSTGUG00000003951	-	99	99.779	Taeniopygia_guttata
ENSFALG00000004328	SRL	63	83.258	ENSTRUG00000006005	srl	94	83.258	Takifugu_rubripes
ENSFALG00000004328	SRL	59	74.702	ENSTRUG00000013310	SRL	55	74.702	Takifugu_rubripes
ENSFALG00000004328	SRL	63	83.258	ENSTNIG00000009739	srl	94	83.258	Tetraodon_nigroviridis
ENSFALG00000004328	SRL	64	91.372	ENSUAMG00000005701	SRL	56	91.372	Ursus_americanus
ENSFALG00000004328	SRL	64	91.372	ENSUMAG00000002574	SRL	56	91.372	Ursus_maritimus
ENSFALG00000004328	SRL	64	90.949	ENSVVUG00000016331	-	50	90.949	Vulpes_vulpes
ENSFALG00000004328	SRL	64	89.778	ENSXETG00000017313	srl	99	89.778	Xenopus_tropicalis
ENSFALG00000004328	SRL	59	85.646	ENSXCOG00000010424	srl	96	85.646	Xiphophorus_couchianus
ENSFALG00000004328	SRL	63	75.909	ENSXCOG00000014584	SRL	98	75.909	Xiphophorus_couchianus
ENSFALG00000004328	SRL	63	73.951	ENSXMAG00000027598	SRL	62	74.172	Xiphophorus_maculatus
ENSFALG00000004328	SRL	63	83.864	ENSXMAG00000004625	srl	89	83.864	Xiphophorus_maculatus