EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000004411 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 133879 bases
Position: chrJH603189.1:21293-155171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004604	KH_1	PF00013.29	8.8e-55	1	3
ENSFALP00000004604	KH_1	PF00013.29	8.8e-55	2	3
ENSFALP00000004604	KH_1	PF00013.29	8.8e-55	3	3
ENSFALP00000004604	KH_2	PF07650.17	2.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004628	-	1822	-	ENSFALP00000004604	474 (aa)	-	U3JPA0

Gene Model

Click here to download ENSFALG00000004411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000004411	-	74	69.086	ENSFALG00000002980	PCBP2	99	69.437
ENSFALG00000004411	-	97	53.696	ENSFALG00000008831	PCBP4	96	53.696
ENSFALG00000004411	-	75	79.213	ENSFALG00000003949	-	97	79.213
ENSFALG00000004411	-	53	46.667	ENSFALG00000012478	HNRNPK	58	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004411	-	77	75.749	ENSAPOG00000016582	-	98	75.749	Acanthochromis_polyacanthus
ENSFALG00000004411	-	75	74.648	ENSAPOG00000020003	pcbp3	85	74.648	Acanthochromis_polyacanthus
ENSFALG00000004411	-	75	78.474	ENSAMEG00000001697	-	97	78.474	Ailuropoda_melanoleuca
ENSFALG00000004411	-	74	76.420	ENSACIG00000002739	-	95	76.420	Amphilophus_citrinellus
ENSFALG00000004411	-	77	76.022	ENSACIG00000010933	pcbp3	98	76.022	Amphilophus_citrinellus
ENSFALG00000004411	-	74	72.404	ENSAOCG00000007806	-	98	72.404	Amphiprion_ocellaris
ENSFALG00000004411	-	74	77.054	ENSAOCG00000008592	-	96	77.054	Amphiprion_ocellaris
ENSFALG00000004411	-	77	77.778	ENSAPEG00000008011	pcbp3	98	77.778	Amphiprion_percula
ENSFALG00000004411	-	74	76.420	ENSAPEG00000005209	-	95	76.420	Amphiprion_percula
ENSFALG00000004411	-	74	75.852	ENSATEG00000009833	-	95	75.852	Anabas_testudineus
ENSFALG00000004411	-	74	78.571	ENSATEG00000015787	-	98	78.571	Anabas_testudineus
ENSFALG00000004411	-	100	92.616	ENSAPLG00000008951	-	100	92.616	Anas_platyrhynchos
ENSFALG00000004411	-	75	76.216	ENSAPLG00000002975	-	97	76.216	Anas_platyrhynchos
ENSFALG00000004411	-	75	78.191	ENSACAG00000004607	-	97	78.191	Anolis_carolinensis
ENSFALG00000004411	-	76	89.444	ENSACAG00000009819	-	97	89.444	Anolis_carolinensis
ENSFALG00000004411	-	73	74.275	ENSANAG00000030702	-	96	74.275	Aotus_nancymaae
ENSFALG00000004411	-	77	77.778	ENSACLG00000011835	pcbp3	98	77.778	Astatotilapia_calliptera
ENSFALG00000004411	-	77	75.204	ENSACLG00000003801	-	98	75.204	Astatotilapia_calliptera
ENSFALG00000004411	-	74	74.571	ENSAMXG00000013588	-	97	74.571	Astyanax_mexicanus
ENSFALG00000004411	-	78	79.245	ENSAMXG00000003440	pcbp3	99	79.245	Astyanax_mexicanus
ENSFALG00000004411	-	100	65.833	ENSAMXG00000001760	zgc:110045	100	65.208	Astyanax_mexicanus
ENSFALG00000004411	-	72	76.157	ENSCAFG00020019472	-	78	83.258	Canis_lupus_dingo
ENSFALG00000004411	-	75	78.652	ENSCSAG00000007440	-	88	78.652	Chlorocebus_sabaeus
ENSFALG00000004411	-	75	79.213	ENSCPBG00000012151	-	97	75.000	Chrysemys_picta_bellii
ENSFALG00000004411	-	100	93.501	ENSCPBG00000000733	-	100	97.717	Chrysemys_picta_bellii
ENSFALG00000004411	-	74	74.857	ENSCSEG00000000822	pcbp3	87	87.204	Cynoglossus_semilaevis
ENSFALG00000004411	-	74	67.308	ENSCSEG00000016984	-	75	89.840	Cynoglossus_semilaevis
ENSFALG00000004411	-	77	75.477	ENSCVAG00000005262	-	98	75.477	Cyprinodon_variegatus
ENSFALG00000004411	-	77	77.778	ENSCVAG00000014482	pcbp3	98	77.778	Cyprinodon_variegatus
ENSFALG00000004411	-	77	79.564	ENSDARG00000054378	pcbp3	98	79.564	Danio_rerio
ENSFALG00000004411	-	75	67.697	ENSETEG00000015988	-	97	67.697	Echinops_telfairi
ENSFALG00000004411	-	76	58.503	ENSEBUG00000005495	pcbp3	73	58.503	Eptatretus_burgeri
ENSFALG00000004411	-	73	62.893	ENSEBUG00000016192	pcbp3	99	62.975	Eptatretus_burgeri
ENSFALG00000004411	-	98	63.235	ENSEBUG00000007485	-	95	71.600	Eptatretus_burgeri
ENSFALG00000004411	-	77	75.683	ENSELUG00000001560	-	94	73.352	Esox_lucius
ENSFALG00000004411	-	77	78.474	ENSELUG00000003521	pcbp3	97	78.474	Esox_lucius
ENSFALG00000004411	-	74	75.852	ENSFHEG00000006539	-	95	75.852	Fundulus_heteroclitus
ENSFALG00000004411	-	77	73.151	ENSFHEG00000016615	pcbp3	97	73.151	Fundulus_heteroclitus
ENSFALG00000004411	-	76	56.383	ENSGMOG00000008611	-	98	57.258	Gadus_morhua
ENSFALG00000004411	-	74	66.313	ENSGMOG00000011992	pcbp3	95	66.489	Gadus_morhua
ENSFALG00000004411	-	77	91.484	ENSGALG00000013155	-	98	89.489	Gallus_gallus
ENSFALG00000004411	-	75	76.330	ENSGALG00000004394	-	100	77.619	Gallus_gallus
ENSFALG00000004411	-	77	75.477	ENSGAFG00000010274	-	98	75.477	Gambusia_affinis
ENSFALG00000004411	-	74	76.487	ENSGAFG00000011430	pcbp3	94	76.487	Gambusia_affinis
ENSFALG00000004411	-	74	70.541	ENSGACG00000014955	-	95	70.541	Gasterosteus_aculeatus
ENSFALG00000004411	-	74	73.784	ENSGACG00000002266	-	94	73.784	Gasterosteus_aculeatus
ENSFALG00000004411	-	58	80.645	ENSGAGG00000006956	-	88	80.645	Gopherus_agassizii
ENSFALG00000004411	-	96	90.464	ENSGAGG00000000271	-	100	91.495	Gopherus_agassizii
ENSFALG00000004411	-	77	77.778	ENSHBUG00000010697	pcbp3	98	77.778	Haplochromis_burtoni
ENSFALG00000004411	-	77	75.204	ENSHBUG00000021782	-	98	75.204	Haplochromis_burtoni
ENSFALG00000004411	-	77	77.989	ENSHCOG00000017868	pcbp3	98	77.989	Hippocampus_comes
ENSFALG00000004411	-	74	60.845	ENSHCOG00000006067	-	95	72.443	Hippocampus_comes
ENSFALG00000004411	-	59	61.353	ENSIPUG00000003914	zgc:110045	100	61.722	Ictalurus_punctatus
ENSFALG00000004411	-	74	82.102	ENSIPUG00000006238	pcbp3	95	82.102	Ictalurus_punctatus
ENSFALG00000004411	-	77	74.932	ENSKMAG00000018530	-	98	74.932	Kryptolebias_marmoratus
ENSFALG00000004411	-	77	77.778	ENSKMAG00000003046	pcbp3	98	77.778	Kryptolebias_marmoratus
ENSFALG00000004411	-	74	74.716	ENSLBEG00000006201	pcbp3	93	74.716	Labrus_bergylta
ENSFALG00000004411	-	99	69.167	ENSLACG00000010386	pcbp3	79	81.003	Latimeria_chalumnae
ENSFALG00000004411	-	100	93.711	ENSLACG00000010804	zgc:110045	100	93.082	Latimeria_chalumnae
ENSFALG00000004411	-	75	82.303	ENSLOCG00000009369	pcbp3	97	82.303	Lepisosteus_oculatus
ENSFALG00000004411	-	100	90.776	ENSLOCG00000005058	zgc:110045	100	91.195	Lepisosteus_oculatus
ENSFALG00000004411	-	74	76.136	ENSMAMG00000011620	-	95	76.136	Mastacembelus_armatus
ENSFALG00000004411	-	76	73.611	ENSMAMG00000022336	pcbp3	94	73.611	Mastacembelus_armatus
ENSFALG00000004411	-	77	69.496	ENSMZEG00005014882	-	98	71.662	Maylandia_zebra
ENSFALG00000004411	-	77	76.022	ENSMZEG00005008993	pcbp3	98	76.022	Maylandia_zebra
ENSFALG00000004411	-	76	70.822	ENSMGAG00000001883	-	97	71.693	Meleagris_gallopavo
ENSFALG00000004411	-	100	97.257	ENSMGAG00000006794	-	100	97.257	Meleagris_gallopavo
ENSFALG00000004411	-	74	74.085	ENSMMOG00000000730	pcbp3	86	74.085	Mola_mola
ENSFALG00000004411	-	74	75.284	ENSMMOG00000005216	-	95	75.284	Mola_mola
ENSFALG00000004411	-	58	70.000	ENSMODG00000027884	-	94	70.000	Monodelphis_domestica
ENSFALG00000004411	-	77	76.022	ENSMALG00000000691	pcbp3	98	76.022	Monopterus_albus
ENSFALG00000004411	-	75	68.883	ENSMPUG00000001779	-	89	68.883	Mustela_putorius_furo
ENSFALG00000004411	-	77	73.925	ENSNBRG00000016714	-	98	73.925	Neolamprologus_brichardi
ENSFALG00000004411	-	77	76.022	ENSNBRG00000016409	-	98	76.022	Neolamprologus_brichardi
ENSFALG00000004411	-	74	75.806	ENSOPRG00000003431	-	99	75.806	Ochotona_princeps
ENSFALG00000004411	-	76	74.934	ENSONIG00000012122	-	98	74.934	Oreochromis_niloticus
ENSFALG00000004411	-	74	77.557	ENSONIG00000004611	-	95	77.557	Oreochromis_niloticus
ENSFALG00000004411	-	75	78.652	ENSOCUG00000002696	-	88	78.652	Oryctolagus_cuniculus
ENSFALG00000004411	-	77	75.815	ENSORLG00000022739	-	98	75.815	Oryzias_latipes
ENSFALG00000004411	-	74	77.429	ENSORLG00000000059	pcbp3	97	77.429	Oryzias_latipes
ENSFALG00000004411	-	77	75.543	ENSORLG00020006124	-	98	75.543	Oryzias_latipes_hni
ENSFALG00000004411	-	74	77.429	ENSORLG00020012671	pcbp3	95	77.429	Oryzias_latipes_hni
ENSFALG00000004411	-	77	75.815	ENSORLG00015008051	-	98	75.815	Oryzias_latipes_hsok
ENSFALG00000004411	-	74	77.429	ENSORLG00015000429	pcbp3	95	77.429	Oryzias_latipes_hsok
ENSFALG00000004411	-	74	78.125	ENSOMEG00000020162	-	95	78.125	Oryzias_melastigma
ENSFALG00000004411	-	72	74.695	ENSOMEG00000020811	pcbp3	97	74.695	Oryzias_melastigma
ENSFALG00000004411	-	75	74.607	ENSOGAG00000008044	-	97	74.607	Otolemur_garnettii
ENSFALG00000004411	-	77	76.022	ENSPKIG00000019329	pcbp3	98	76.022	Paramormyrops_kingsleyae
ENSFALG00000004411	-	59	84.932	ENSPKIG00000020913	-	95	84.932	Paramormyrops_kingsleyae
ENSFALG00000004411	-	96	90.722	ENSPSIG00000008350	-	100	91.753	Pelodiscus_sinensis
ENSFALG00000004411	-	75	67.828	ENSPSIG00000014970	-	97	68.365	Pelodiscus_sinensis
ENSFALG00000004411	-	77	78.142	ENSPMGG00000022383	pcbp3	98	78.142	Periophthalmus_magnuspinnatus
ENSFALG00000004411	-	53	91.146	ENSPMAG00000004637	-	99	91.146	Petromyzon_marinus
ENSFALG00000004411	-	76	64.011	ENSPMAG00000004551	pcbp3	90	64.011	Petromyzon_marinus
ENSFALG00000004411	-	75	82.303	ENSPCIG00000028092	-	97	82.303	Phascolarctos_cinereus
ENSFALG00000004411	-	74	73.151	ENSPLAG00000004074	-	89	73.151	Poecilia_latipinna
ENSFALG00000004411	-	76	72.178	ENSPLAG00000011449	pcbp3	89	72.178	Poecilia_latipinna
ENSFALG00000004411	-	77	72.752	ENSPMEG00000006653	-	98	72.752	Poecilia_mexicana
ENSFALG00000004411	-	77	77.568	ENSPMEG00000021239	pcbp3	98	77.568	Poecilia_mexicana
ENSFALG00000004411	-	74	75.852	ENSPREG00000020585	-	91	83.260	Poecilia_reticulata
ENSFALG00000004411	-	74	72.958	ENSPREG00000015736	pcbp3	98	72.958	Poecilia_reticulata
ENSFALG00000004411	-	74	75.284	ENSPNYG00000013205	-	95	75.284	Pundamilia_nyererei
ENSFALG00000004411	-	75	74.294	ENSPNYG00000012326	pcbp3	94	74.294	Pundamilia_nyererei
ENSFALG00000004411	-	58	67.299	ENSPNAG00000006838	zgc:110045	100	67.299	Pygocentrus_nattereri
ENSFALG00000004411	-	77	77.717	ENSPNAG00000008541	-	98	77.717	Pygocentrus_nattereri
ENSFALG00000004411	-	74	78.125	ENSPNAG00000015104	pcbp3	95	78.125	Pygocentrus_nattereri
ENSFALG00000004411	-	75	78.652	ENSRNOG00000001245	Pcbp3	97	78.652	Rattus_norvegicus
ENSFALG00000004411	-	75	70.652	ENSRBIG00000028177	-	97	69.845	Rhinopithecus_bieti
ENSFALG00000004411	-	75	76.253	ENSSHAG00000007890	-	97	74.734	Sarcophilus_harrisii
ENSFALG00000004411	-	74	80.286	ENSSFOG00015010205	pcbp3	98	80.286	Scleropages_formosus
ENSFALG00000004411	-	76	76.816	ENSSFOG00015007118	-	95	76.816	Scleropages_formosus
ENSFALG00000004411	-	77	78.202	ENSSFOG00015014706	pcbp3	98	78.202	Scleropages_formosus
ENSFALG00000004411	-	77	75.477	ENSSMAG00000003135	-	98	75.477	Scophthalmus_maximus
ENSFALG00000004411	-	74	75.143	ENSSMAG00000011929	pcbp3	95	75.143	Scophthalmus_maximus
ENSFALG00000004411	-	77	73.297	ENSSDUG00000008502	-	98	73.297	Seriola_dumerili
ENSFALG00000004411	-	74	78.125	ENSSDUG00000011608	pcbp3	96	78.125	Seriola_dumerili
ENSFALG00000004411	-	77	75.749	ENSSLDG00000020161	-	98	75.749	Seriola_lalandi_dorsalis
ENSFALG00000004411	-	74	78.125	ENSSLDG00000008518	pcbp3	96	78.125	Seriola_lalandi_dorsalis
ENSFALG00000004411	-	100	90.756	ENSSPUG00000013214	-	100	91.176	Sphenodon_punctatus
ENSFALG00000004411	-	73	73.112	ENSSPAG00000004190	-	97	73.112	Stegastes_partitus
ENSFALG00000004411	-	77	65.940	ENSSPAG00000023341	-	98	65.940	Stegastes_partitus
ENSFALG00000004411	-	75	72.074	ENSTGUG00000003316	-	97	72.074	Taeniopygia_guttata
ENSFALG00000004411	-	75	85.955	ENSTGUG00000008158	-	97	85.955	Taeniopygia_guttata
ENSFALG00000004411	-	73	76.074	ENSTRUG00000006280	-	89	76.074	Takifugu_rubripes
ENSFALG00000004411	-	77	75.204	ENSTRUG00000013604	pcbp3	84	92.708	Takifugu_rubripes
ENSFALG00000004411	-	75	77.128	ENSTTRG00000015075	-	97	77.128	Tursiops_truncatus
ENSFALG00000004411	-	97	89.716	ENSXETG00000010491	pcbp2	100	91.247	Xenopus_tropicalis
ENSFALG00000004411	-	75	74.468	ENSXETG00000011483	pcbp1	97	74.468	Xenopus_tropicalis
ENSFALG00000004411	-	77	77.568	ENSXCOG00000020481	pcbp3	98	77.568	Xiphophorus_couchianus
ENSFALG00000004411	-	77	77.778	ENSXMAG00000008175	pcbp3	98	77.778	Xiphophorus_maculatus
ENSFALG00000004411	-	77	75.749	ENSXMAG00000028711	-	98	75.749	Xiphophorus_maculatus