EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFALG00000004440 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Minus strand
Length
70958 bases
Position
chrJH603264.1:2828184-2899141
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000004618RRM_1PF00076.223.7e-3312
ENSFALP00000004618RRM_1PF00076.223.7e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000004642RBMS1-2015625-ENSFALP00000004618370 (aa)-U3JPB4
Gene Model
Click here to download ENSFALG00000004440's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004440's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFALG00000004440RBMS15136.410ENSFALG00000005331ELAVL46336.872
ENSFALG00000004440RBMS19477.322ENSFALG00000009165RBMS38777.322
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000004440RBMS19492.837ENSG00000153250RBMS110098.425Homo_sapiens
ENSFALG00000004440RBMS19579.603ENSAPOG00000024437-9474.105Acanthochromis_polyacanthus
ENSFALG00000004440RBMS19764.444ENSAPOG00000013761rbms1a8965.116Acanthochromis_polyacanthus
ENSFALG00000004440RBMS19492.351ENSAMEG00000012661RBMS19292.351Ailuropoda_melanoleuca
ENSFALG00000004440RBMS19579.320ENSACIG00000021498RBMS18879.545Amphilophus_citrinellus
ENSFALG00000004440RBMS18065.772ENSACIG00000000113rbms1a8165.993Amphilophus_citrinellus
ENSFALG00000004440RBMS19579.603ENSAOCG00000014482-9474.586Amphiprion_ocellaris
ENSFALG00000004440RBMS19764.444ENSAOCG00000010066rbms1a8965.116Amphiprion_ocellaris
ENSFALG00000004440RBMS19579.320ENSAPEG00000018371-8879.545Amphiprion_percula
ENSFALG00000004440RBMS19764.444ENSAPEG00000023563rbms1a8965.217Amphiprion_percula
ENSFALG00000004440RBMS19765.278ENSATEG00000015450rbms1a8965.988Anabas_testudineus
ENSFALG00000004440RBMS19579.037ENSATEG00000018573RBMS18979.261Anabas_testudineus
ENSFALG00000004440RBMS110099.730ENSAPLG00000007282RBMS19499.730Anas_platyrhynchos
ENSFALG00000004440RBMS110095.467ENSACAG00000011984RBMS17795.467Anolis_carolinensis
ENSFALG00000004440RBMS18692.236ENSANAG00000024424RBMS110092.236Aotus_nancymaae
ENSFALG00000004440RBMS110078.016ENSACLG00000013048RBMS18877.841Astatotilapia_calliptera
ENSFALG00000004440RBMS19365.029ENSACLG00000021512rbms1a9065.217Astatotilapia_calliptera
ENSFALG00000004440RBMS19473.864ENSAMXG00000002146rbms1a8873.864Astyanax_mexicanus
ENSFALG00000004440RBMS110079.412ENSAMXG00000009969RBMS19480.114Astyanax_mexicanus
ENSFALG00000004440RBMS19493.466ENSBTAG00000005180RBMS18793.466Bos_taurus
ENSFALG00000004440RBMS110090.811ENSCJAG00000012871-9390.544Callithrix_jacchus
ENSFALG00000004440RBMS19493.123ENSCJAG00000014861-8993.123Callithrix_jacchus
ENSFALG00000004440RBMS19987.705ENSCJAG00000022465-9587.679Callithrix_jacchus
ENSFALG00000004440RBMS19492.614ENSCAFG00000009922RBMS18792.614Canis_familiaris
ENSFALG00000004440RBMS19493.410ENSCAFG00020006120RBMS18793.410Canis_lupus_dingo
ENSFALG00000004440RBMS19494.269ENSCHIG00000023380RBMS18794.269Capra_hircus
ENSFALG00000004440RBMS19493.123ENSTSYG00000005584RBMS19493.123Carlito_syrichta
ENSFALG00000004440RBMS19492.550ENSCPOG00000012310RBMS19388.493Cavia_porcellus
ENSFALG00000004440RBMS19492.330ENSCCAG00000033841RBMS19192.330Cebus_capucinus
ENSFALG00000004440RBMS19493.123ENSCATG00000043032RBMS19493.123Cercocebus_atys
ENSFALG00000004440RBMS19492.837ENSCLAG00000003031RBMS19588.767Chinchilla_lanigera
ENSFALG00000004440RBMS19492.330ENSCSAG00000015687RBMS18792.330Chlorocebus_sabaeus
ENSFALG00000004440RBMS15097.030ENSCHOG00000001579RBMS16297.030Choloepus_hoffmanni
ENSFALG00000004440RBMS110097.587ENSCPBG00000026455RBMS19397.587Chrysemys_picta_bellii
ENSFALG00000004440RBMS19493.123ENSCANG00000042152RBMS19493.123Colobus_angolensis_palliatus
ENSFALG00000004440RBMS19493.123ENSCGRG00001022833Rbms18793.123Cricetulus_griseus_chok1gshd
ENSFALG00000004440RBMS19493.123ENSCGRG00000008824Rbms19389.041Cricetulus_griseus_crigri
ENSFALG00000004440RBMS19762.778ENSCSEG00000000889rbms1a9063.372Cynoglossus_semilaevis
ENSFALG00000004440RBMS110075.733ENSCSEG00000010652RBMS19475.568Cynoglossus_semilaevis
ENSFALG00000004440RBMS19765.278ENSCVAG00000014698rbms1a8965.698Cyprinodon_variegatus
ENSFALG00000004440RBMS110076.944ENSCVAG00000002027RBMS19678.409Cyprinodon_variegatus
ENSFALG00000004440RBMS19474.148ENSDARG00000074023rbms1a8774.148Danio_rerio
ENSFALG00000004440RBMS19488.587ENSDNOG00000040691RBMS19588.587Dasypus_novemcinctus
ENSFALG00000004440RBMS19492.837ENSDORG00000007103Rbms19588.767Dipodomys_ordii
ENSFALG00000004440RBMS19480.114ENSETEG00000012135RBMS19280.114Echinops_telfairi
ENSFALG00000004440RBMS19492.330ENSEASG00005023132RBMS18792.330Equus_asinus_asinus
ENSFALG00000004440RBMS19492.330ENSECAG00000019894RBMS18792.330Equus_caballus
ENSFALG00000004440RBMS17297.959ENSEEUG00000005628RBMS16697.959Erinaceus_europaeus
ENSFALG00000004440RBMS19571.388ENSELUG00000019328RBMS18671.591Esox_lucius
ENSFALG00000004440RBMS19965.860ENSELUG00000018923rbms1a9567.422Esox_lucius
ENSFALG00000004440RBMS19492.837ENSFCAG00000012524RBMS19492.837Felis_catus
ENSFALG00000004440RBMS19493.123ENSFDAG00000015692RBMS19389.041Fukomys_damarensis
ENSFALG00000004440RBMS19477.557ENSFHEG00000000720RBMS18977.557Fundulus_heteroclitus
ENSFALG00000004440RBMS19765.556ENSFHEG00000005662rbms1a7981.529Fundulus_heteroclitus
ENSFALG00000004440RBMS19062.974ENSGMOG00000000525rbms1a9961.972Gadus_morhua
ENSFALG00000004440RBMS1100100.000ENSGALG00000011132RBMS1100100.000Gallus_gallus
ENSFALG00000004440RBMS19765.278ENSGAFG00000011633rbms1a9565.988Gambusia_affinis
ENSFALG00000004440RBMS19476.989ENSGAFG00000007708RBMS18876.989Gambusia_affinis
ENSFALG00000004440RBMS19760.372ENSGACG00000015174rbms1a9166.563Gasterosteus_aculeatus
ENSFALG00000004440RBMS19576.771ENSGACG00000005671RBMS18976.989Gasterosteus_aculeatus
ENSFALG00000004440RBMS110097.319ENSGAGG00000007866RBMS19397.319Gopherus_agassizii
ENSFALG00000004440RBMS19490.057ENSGGOG00000043756-8790.057Gorilla_gorilla
ENSFALG00000004440RBMS19492.837ENSGGOG00000001264RBMS19492.837Gorilla_gorilla
ENSFALG00000004440RBMS19365.029ENSHBUG00000004802rbms1a9065.217Haplochromis_burtoni
ENSFALG00000004440RBMS18879.878ENSHBUG00000004516RBMS19280.122Haplochromis_burtoni
ENSFALG00000004440RBMS19492.550ENSHGLG00000010387RBMS19388.493Heterocephalus_glaber_female
ENSFALG00000004440RBMS19492.550ENSHGLG00100014105RBMS19388.493Heterocephalus_glaber_male
ENSFALG00000004440RBMS19574.504ENSHCOG00000016668RBMS18874.716Hippocampus_comes
ENSFALG00000004440RBMS19763.611ENSHCOG00000020097rbms1a8964.244Hippocampus_comes
ENSFALG00000004440RBMS110080.965ENSIPUG00000014677RBMS18881.534Ictalurus_punctatus
ENSFALG00000004440RBMS19474.148ENSIPUG00000010131RBMS18874.148Ictalurus_punctatus
ENSFALG00000004440RBMS19492.837ENSSTOG00000012501RBMS19388.767Ictidomys_tridecemlineatus
ENSFALG00000004440RBMS19492.550ENSJJAG00000016543Rbms19588.493Jaculus_jaculus
ENSFALG00000004440RBMS19479.545ENSKMAG00000013911RBMS18879.545Kryptolebias_marmoratus
ENSFALG00000004440RBMS19763.712ENSKMAG00000011839-8964.348Kryptolebias_marmoratus
ENSFALG00000004440RBMS19764.444ENSLBEG00000025962rbms1a8965.116Labrus_bergylta
ENSFALG00000004440RBMS19578.470ENSLBEG00000005787RBMS18878.693Labrus_bergylta
ENSFALG00000004440RBMS110084.881ENSLACG00000004324RBMS110079.038Latimeria_chalumnae
ENSFALG00000004440RBMS19586.119ENSLOCG00000008622rbms1a8886.364Lepisosteus_oculatus
ENSFALG00000004440RBMS19492.837ENSLAFG00000017217RBMS19292.837Loxodonta_africana
ENSFALG00000004440RBMS19493.123ENSMFAG00000000274RBMS19493.123Macaca_fascicularis
ENSFALG00000004440RBMS19492.330ENSMMUG00000016825RBMS19292.330Macaca_mulatta
ENSFALG00000004440RBMS19493.123ENSMNEG00000039425RBMS19493.123Macaca_nemestrina
ENSFALG00000004440RBMS19492.837ENSMLEG00000031517RBMS19492.837Mandrillus_leucophaeus
ENSFALG00000004440RBMS19762.778ENSMAMG00000005018rbms1a8963.372Mastacembelus_armatus
ENSFALG00000004440RBMS19577.620ENSMAMG00000003159-9278.063Mastacembelus_armatus
ENSFALG00000004440RBMS18879.268ENSMZEG00005007313RBMS19179.511Maylandia_zebra
ENSFALG00000004440RBMS19365.029ENSMZEG00005005661rbms1a9065.217Maylandia_zebra
ENSFALG00000004440RBMS110099.196ENSMGAG00000011054RBMS110099.196Meleagris_gallopavo
ENSFALG00000004440RBMS19492.550ENSMAUG00000008550Rbms18792.550Mesocricetus_auratus
ENSFALG00000004440RBMS19492.614ENSMICG00000008325RBMS19292.614Microcebus_murinus
ENSFALG00000004440RBMS19491.977ENSMOCG00000022617Rbms19587.945Microtus_ochrogaster
ENSFALG00000004440RBMS19577.620ENSMMOG00000003707RBMS18877.841Mola_mola
ENSFALG00000004440RBMS18467.628ENSMMOG00000018249rbms1a8169.463Mola_mola
ENSFALG00000004440RBMS110096.216ENSMODG00000005250RBMS19296.216Monodelphis_domestica
ENSFALG00000004440RBMS19764.444ENSMALG00000014235rbms1a8965.116Monopterus_albus
ENSFALG00000004440RBMS19080.299ENSMALG00000015715-9078.693Monopterus_albus
ENSFALG00000004440RBMS19491.404MGP_CAROLIEiJ_G0023586Rbms19587.397Mus_caroli
ENSFALG00000004440RBMS19491.404ENSMUSG00000026970Rbms19587.397Mus_musculus
ENSFALG00000004440RBMS19491.117MGP_PahariEiJ_G0025037Rbms18791.117Mus_pahari
ENSFALG00000004440RBMS19491.691MGP_SPRETEiJ_G0024508Rbms19587.671Mus_spretus
ENSFALG00000004440RBMS19489.315ENSMPUG00000000539RBMS18789.315Mustela_putorius_furo
ENSFALG00000004440RBMS19488.011ENSMLUG00000008762RBMS18888.011Myotis_lucifugus
ENSFALG00000004440RBMS19493.123ENSNGAG00000013636Rbms18793.123Nannospalax_galili
ENSFALG00000004440RBMS18168.439ENSNBRG00000020217rbms1a8568.667Neolamprologus_brichardi
ENSFALG00000004440RBMS19574.504ENSNBRG00000015151RBMS19474.716Neolamprologus_brichardi
ENSFALG00000004440RBMS19492.837ENSNLEG00000001667RBMS19492.837Nomascus_leucogenys
ENSFALG00000004440RBMS18682.609ENSMEUG00000000746RBMS110082.609Notamacropus_eugenii
ENSFALG00000004440RBMS19484.943ENSOPRG00000012431RBMS18784.943Ochotona_princeps
ENSFALG00000004440RBMS19492.837ENSODEG00000013934RBMS19588.767Octodon_degus
ENSFALG00000004440RBMS19365.896ENSONIG00000003329rbms1a8866.087Oreochromis_niloticus
ENSFALG00000004440RBMS19578.470ENSONIG00000008934RBMS18878.693Oreochromis_niloticus
ENSFALG00000004440RBMS110096.247ENSOANG00000006166RBMS19496.247Ornithorhynchus_anatinus
ENSFALG00000004440RBMS15857.676ENSOANG00000004477-9958.264Ornithorhynchus_anatinus
ENSFALG00000004440RBMS19492.550ENSOCUG00000017365RBMS18292.550Oryctolagus_cuniculus
ENSFALG00000004440RBMS19077.679ENSORLG00000016818RBMS18976.487Oryzias_latipes
ENSFALG00000004440RBMS19763.056ENSORLG00000003917rbms1a9063.663Oryzias_latipes
ENSFALG00000004440RBMS19077.381ENSORLG00020022335RBMS18976.204Oryzias_latipes_hni
ENSFALG00000004440RBMS19762.778ENSORLG00020018663rbms1a9063.372Oryzias_latipes_hni
ENSFALG00000004440RBMS19763.056ENSORLG00015016556rbms1a9063.663Oryzias_latipes_hsok
ENSFALG00000004440RBMS19077.976ENSORLG00015018208RBMS18976.771Oryzias_latipes_hsok
ENSFALG00000004440RBMS19078.806ENSOMEG00000002394RBMS18877.557Oryzias_melastigma
ENSFALG00000004440RBMS19490.960ENSOGAG00000002900RBMS19490.960Otolemur_garnettii
ENSFALG00000004440RBMS19494.269ENSOARG00000006870RBMS19589.646Ovis_aries
ENSFALG00000004440RBMS19488.068ENSPPAG00000036520-9288.068Pan_paniscus
ENSFALG00000004440RBMS19492.045ENSPPAG00000040083RBMS19292.045Pan_paniscus
ENSFALG00000004440RBMS19492.837ENSPPRG00000005040RBMS19492.837Panthera_pardus
ENSFALG00000004440RBMS19492.837ENSPTIG00000021240RBMS19492.837Panthera_tigris_altaica
ENSFALG00000004440RBMS19488.920ENSPTRG00000039358-9984.058Pan_troglodytes
ENSFALG00000004440RBMS19492.045ENSPTRG00000052304RBMS19292.045Pan_troglodytes
ENSFALG00000004440RBMS19493.123ENSPANG00000001383RBMS19292.330Papio_anubis
ENSFALG00000004440RBMS19579.545ENSPKIG00000012818rbms1a8879.772Paramormyrops_kingsleyae
ENSFALG00000004440RBMS110080.000ENSPKIG00000001498rbms1a8880.170Paramormyrops_kingsleyae
ENSFALG00000004440RBMS110098.108ENSPSIG00000010240RBMS19298.108Pelodiscus_sinensis
ENSFALG00000004440RBMS19361.272ENSPMGG00000004341rbms1a9061.449Periophthalmus_magnuspinnatus
ENSFALG00000004440RBMS18978.248ENSPMGG00000006310RBMS19570.445Periophthalmus_magnuspinnatus
ENSFALG00000004440RBMS19492.837ENSPEMG00000009449Rbms18992.045Peromyscus_maniculatus_bairdii
ENSFALG00000004440RBMS110096.216ENSPCIG00000018405RBMS19396.216Phascolarctos_cinereus
ENSFALG00000004440RBMS19476.705ENSPFOG00000017483RBMS18876.705Poecilia_formosa
ENSFALG00000004440RBMS19765.278ENSPFOG00000016116rbms1a8965.988Poecilia_formosa
ENSFALG00000004440RBMS19765.278ENSPLAG00000013864rbms1a8965.988Poecilia_latipinna
ENSFALG00000004440RBMS19476.989ENSPLAG00000000920RBMS18876.989Poecilia_latipinna
ENSFALG00000004440RBMS19476.705ENSPMEG00000015838RBMS18876.705Poecilia_mexicana
ENSFALG00000004440RBMS19765.278ENSPMEG00000016185rbms1a8965.988Poecilia_mexicana
ENSFALG00000004440RBMS19765.278ENSPREG00000020161rbms1a8965.988Poecilia_reticulata
ENSFALG00000004440RBMS19477.273ENSPREG00000008146RBMS18877.273Poecilia_reticulata
ENSFALG00000004440RBMS19487.772ENSPPYG00000012879-8787.772Pongo_abelii
ENSFALG00000004440RBMS19485.795ENSPCAG00000009673RBMS18785.795Procavia_capensis
ENSFALG00000004440RBMS19493.410ENSPCOG00000027294RBMS19493.410Propithecus_coquereli
ENSFALG00000004440RBMS110080.965ENSPVAG00000010429RBMS19280.965Pteropus_vampyrus
ENSFALG00000004440RBMS19578.187ENSPNYG00000002643RBMS19176.147Pundamilia_nyererei
ENSFALG00000004440RBMS110081.016ENSPNAG00000023479RBMS18881.818Pygocentrus_nattereri
ENSFALG00000004440RBMS19474.432ENSPNAG00000010225rbms1a8874.432Pygocentrus_nattereri
ENSFALG00000004440RBMS19492.264ENSRNOG00000008482Rbms18792.264Rattus_norvegicus
ENSFALG00000004440RBMS19492.330ENSRBIG00000044262RBMS19292.068Rhinopithecus_bieti
ENSFALG00000004440RBMS19492.330ENSRROG00000043108RBMS19292.330Rhinopithecus_roxellana
ENSFALG00000004440RBMS19492.330ENSSBOG00000034705RBMS19492.330Saimiri_boliviensis_boliviensis
ENSFALG00000004440RBMS19496.275ENSSHAG00000012271RBMS110090.643Sarcophilus_harrisii
ENSFALG00000004440RBMS19479.830ENSSFOG00015014493rbms1a9579.830Scleropages_formosus
ENSFALG00000004440RBMS19482.906ENSSFOG00015022929rbms18883.143Scleropages_formosus
ENSFALG00000004440RBMS19576.771ENSSMAG00000012152RBMS18778.899Scophthalmus_maximus
ENSFALG00000004440RBMS19364.348ENSSMAG00000012722rbms1a9564.535Scophthalmus_maximus
ENSFALG00000004440RBMS19764.722ENSSDUG00000020602rbms1a9565.507Seriola_dumerili
ENSFALG00000004440RBMS19579.603ENSSDUG00000018803RBMS18879.830Seriola_dumerili
ENSFALG00000004440RBMS19579.320ENSSLDG00000016556RBMS19178.287Seriola_lalandi_dorsalis
ENSFALG00000004440RBMS19764.722ENSSLDG00000009495rbms1a8965.407Seriola_lalandi_dorsalis
ENSFALG00000004440RBMS19461.932ENSSARG00000011085RBMS18761.932Sorex_araneus
ENSFALG00000004440RBMS110097.059ENSSPUG00000017163RBMS110097.059Sphenodon_punctatus
ENSFALG00000004440RBMS19764.167ENSSPAG00000005371rbms1a8964.826Stegastes_partitus
ENSFALG00000004440RBMS19579.887ENSSPAG00000000059RBMS18880.114Stegastes_partitus
ENSFALG00000004440RBMS19493.983ENSSSCG00000015888RBMS18793.983Sus_scrofa
ENSFALG00000004440RBMS1100100.000ENSTGUG00000006606RBMS192100.000Taeniopygia_guttata
ENSFALG00000004440RBMS19264.035ENSTRUG00000017155rbms1a8964.638Takifugu_rubripes
ENSFALG00000004440RBMS19576.487ENSTRUG00000005466-8876.705Takifugu_rubripes
ENSFALG00000004440RBMS19562.393ENSTNIG00000009477rbms1a9962.539Tetraodon_nigroviridis
ENSFALG00000004440RBMS110076.408ENSTNIG00000016496RBMS19778.693Tetraodon_nigroviridis
ENSFALG00000004440RBMS110084.182ENSTBEG00000016156RBMS19884.182Tupaia_belangeri
ENSFALG00000004440RBMS19492.614ENSTTRG00000011058RBMS19292.614Tursiops_truncatus
ENSFALG00000004440RBMS19493.410ENSUAMG00000022331RBMS18793.410Ursus_americanus
ENSFALG00000004440RBMS19493.410ENSUMAG00000008605RBMS19093.410Ursus_maritimus
ENSFALG00000004440RBMS18892.661ENSVPAG00000002716RBMS18692.661Vicugna_pacos
ENSFALG00000004440RBMS19493.410ENSVVUG00000018682RBMS19493.410Vulpes_vulpes
ENSFALG00000004440RBMS110085.027ENSXETG00000016204rbms19585.634Xenopus_tropicalis
ENSFALG00000004440RBMS19762.222ENSXCOG00000001659rbms1a8962.899Xiphophorus_couchianus
ENSFALG00000004440RBMS19476.989ENSXCOG00000000211RBMS19576.989Xiphophorus_couchianus
ENSFALG00000004440RBMS19765.278ENSXMAG00000001802rbms1a8965.988Xiphophorus_maculatus
ENSFALG00000004440RBMS19476.989ENSXMAG00000011405RBMS19474.212Xiphophorus_maculatus

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