EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004508 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 40545 bases
Position: chrJH603336.1:19305-59849
Accession: 101816872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004723	XRN_N	PF03159.18	1.3e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004747	XRN2-201	3414	XM_016305155	ENSFALP00000004723	947 (aa)	XP_016160641	U3JPL9

Gene Model

Click here to download ENSFALG00000004508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004508	XRN2	100	82.827	ENSG00000088930	XRN2	100	82.390	Homo_sapiens
ENSFALG00000004508	XRN2	97	71.702	ENSAPOG00000009818	xrn2	96	71.898	Acanthochromis_polyacanthus
ENSFALG00000004508	XRN2	100	83.333	ENSAMEG00000012581	XRN2	100	82.914	Ailuropoda_melanoleuca
ENSFALG00000004508	XRN2	90	70.924	ENSACIG00000015047	xrn2	95	75.915	Amphilophus_citrinellus
ENSFALG00000004508	XRN2	89	76.519	ENSAOCG00000023632	xrn2	100	70.846	Amphiprion_ocellaris
ENSFALG00000004508	XRN2	97	71.809	ENSAPEG00000014871	xrn2	100	70.744	Amphiprion_percula
ENSFALG00000004508	XRN2	89	75.850	ENSATEG00000001273	xrn2	98	71.067	Anabas_testudineus
ENSFALG00000004508	XRN2	97	94.600	ENSAPLG00000013869	XRN2	100	94.600	Anas_platyrhynchos
ENSFALG00000004508	XRN2	100	82.536	ENSACAG00000005565	XRN2	100	82.536	Anolis_carolinensis
ENSFALG00000004508	XRN2	100	83.019	ENSANAG00000020126	XRN2	100	82.600	Aotus_nancymaae
ENSFALG00000004508	XRN2	90	73.148	ENSACLG00000010522	xrn2	96	75.833	Astatotilapia_calliptera
ENSFALG00000004508	XRN2	100	71.238	ENSAMXG00000018301	xrn2	100	71.238	Astyanax_mexicanus
ENSFALG00000004508	XRN2	100	82.495	ENSBTAG00000011304	XRN2	100	82.075	Bos_taurus
ENSFALG00000004508	XRN2	86	54.877	WBGene00006964	xrn-2	88	54.461	Caenorhabditis_elegans
ENSFALG00000004508	XRN2	100	82.914	ENSCJAG00000005611	XRN2	100	82.495	Callithrix_jacchus
ENSFALG00000004508	XRN2	100	83.438	ENSCAFG00000005185	XRN2	100	83.019	Canis_familiaris
ENSFALG00000004508	XRN2	100	83.438	ENSCAFG00020027479	XRN2	100	83.019	Canis_lupus_dingo
ENSFALG00000004508	XRN2	100	82.600	ENSCHIG00000006921	XRN2	100	82.180	Capra_hircus
ENSFALG00000004508	XRN2	100	82.390	ENSTSYG00000008315	XRN2	100	81.971	Carlito_syrichta
ENSFALG00000004508	XRN2	97	70.323	ENSCAPG00000010773	XRN2	99	69.032	Cavia_aperea
ENSFALG00000004508	XRN2	100	83.333	ENSCPOG00000009407	XRN2	100	82.914	Cavia_porcellus
ENSFALG00000004508	XRN2	100	83.019	ENSCATG00000040350	XRN2	100	82.600	Cercocebus_atys
ENSFALG00000004508	XRN2	100	83.648	ENSCLAG00000013419	XRN2	100	83.229	Chinchilla_lanigera
ENSFALG00000004508	XRN2	100	83.019	ENSCSAG00000011094	XRN2	100	82.600	Chlorocebus_sabaeus
ENSFALG00000004508	XRN2	68	94.086	ENSCHOG00000013404	XRN2	63	94.086	Choloepus_hoffmanni
ENSFALG00000004508	XRN2	100	88.321	ENSCPBG00000023533	XRN2	100	88.321	Chrysemys_picta_bellii
ENSFALG00000004508	XRN2	86	60.312	ENSCING00000022336	-	100	60.791	Ciona_intestinalis
ENSFALG00000004508	XRN2	87	59.237	ENSCSAVG00000011217	-	100	61.905	Ciona_savignyi
ENSFALG00000004508	XRN2	100	83.019	ENSCANG00000040240	XRN2	100	82.600	Colobus_angolensis_palliatus
ENSFALG00000004508	XRN2	98	82.995	ENSCGRG00001010676	Xrn2	99	82.995	Cricetulus_griseus_chok1gshd
ENSFALG00000004508	XRN2	97	82.151	ENSCGRG00000006378	Xrn2	99	81.720	Cricetulus_griseus_crigri
ENSFALG00000004508	XRN2	54	73.777	ENSCSEG00000005628	xrn2	100	73.777	Cynoglossus_semilaevis
ENSFALG00000004508	XRN2	90	71.233	ENSCVAG00000018999	xrn2	98	78.011	Cyprinodon_variegatus
ENSFALG00000004508	XRN2	100	71.576	ENSDARG00000101900	xrn2	96	80.806	Danio_rerio
ENSFALG00000004508	XRN2	100	83.019	ENSDNOG00000001895	XRN2	100	82.600	Dasypus_novemcinctus
ENSFALG00000004508	XRN2	100	81.866	ENSDORG00000005434	Xrn2	100	81.447	Dipodomys_ordii
ENSFALG00000004508	XRN2	87	55.448	FBgn0031868	Rat1	91	54.588	Drosophila_melanogaster
ENSFALG00000004508	XRN2	100	72.537	ENSETEG00000001740	XRN2	100	72.117	Echinops_telfairi
ENSFALG00000004508	XRN2	84	70.581	ENSEBUG00000016136	xrn2	100	70.581	Eptatretus_burgeri
ENSFALG00000004508	XRN2	100	82.914	ENSEASG00005002484	XRN2	100	82.495	Equus_asinus_asinus
ENSFALG00000004508	XRN2	94	96.154	ENSECAG00000018988	XRN2	95	96.154	Equus_caballus
ENSFALG00000004508	XRN2	80	96.000	ENSEEUG00000009265	XRN2	76	96.000	Erinaceus_europaeus
ENSFALG00000004508	XRN2	100	70.195	ENSELUG00000000552	xrn2	94	73.064	Esox_lucius
ENSFALG00000004508	XRN2	100	83.124	ENSFCAG00000007970	XRN2	100	82.704	Felis_catus
ENSFALG00000004508	XRN2	100	83.124	ENSFDAG00000016311	XRN2	100	82.704	Fukomys_damarensis
ENSFALG00000004508	XRN2	54	71.264	ENSFHEG00000013039	xrn2	98	71.264	Fundulus_heteroclitus
ENSFALG00000004508	XRN2	86	75.152	ENSGMOG00000013436	xrn2	100	75.152	Gadus_morhua
ENSFALG00000004508	XRN2	100	93.895	ENSGALG00000008372	XRN2	100	93.895	Gallus_gallus
ENSFALG00000004508	XRN2	90	74.164	ENSGAFG00000014284	xrn2	99	74.164	Gambusia_affinis
ENSFALG00000004508	XRN2	87	76.116	ENSGACG00000011870	xrn2	96	79.264	Gasterosteus_aculeatus
ENSFALG00000004508	XRN2	100	88.425	ENSGAGG00000004884	XRN2	100	88.425	Gopherus_agassizii
ENSFALG00000004508	XRN2	100	83.019	ENSGGOG00000013738	XRN2	100	82.600	Gorilla_gorilla
ENSFALG00000004508	XRN2	54	74.566	ENSHBUG00000005077	xrn2	96	75.833	Haplochromis_burtoni
ENSFALG00000004508	XRN2	100	82.285	ENSHGLG00000014831	XRN2	100	81.761	Heterocephalus_glaber_female
ENSFALG00000004508	XRN2	100	82.285	ENSHGLG00100013130	XRN2	100	81.761	Heterocephalus_glaber_male
ENSFALG00000004508	XRN2	99	67.807	ENSHCOG00000011994	xrn2	94	73.519	Hippocampus_comes
ENSFALG00000004508	XRN2	100	69.939	ENSIPUG00000006639	xrn2	100	69.939	Ictalurus_punctatus
ENSFALG00000004508	XRN2	100	83.543	ENSSTOG00000000589	XRN2	100	83.124	Ictidomys_tridecemlineatus
ENSFALG00000004508	XRN2	100	82.704	ENSJJAG00000022128	Xrn2	100	82.285	Jaculus_jaculus
ENSFALG00000004508	XRN2	54	81.176	ENSLBEG00000010041	xrn2	100	81.176	Labrus_bergylta
ENSFALG00000004508	XRN2	93	75.835	ENSLACG00000008307	XRN2	97	79.975	Latimeria_chalumnae
ENSFALG00000004508	XRN2	99	72.508	ENSLOCG00000016874	xrn2	100	72.508	Lepisosteus_oculatus
ENSFALG00000004508	XRN2	100	82.495	ENSLAFG00000014624	XRN2	100	82.075	Loxodonta_africana
ENSFALG00000004508	XRN2	100	83.019	ENSMFAG00000038122	XRN2	100	82.600	Macaca_fascicularis
ENSFALG00000004508	XRN2	100	83.019	ENSMMUG00000011405	XRN2	100	82.600	Macaca_mulatta
ENSFALG00000004508	XRN2	100	83.124	ENSMNEG00000040626	XRN2	100	82.704	Macaca_nemestrina
ENSFALG00000004508	XRN2	100	83.019	ENSMLEG00000041897	XRN2	100	82.600	Mandrillus_leucophaeus
ENSFALG00000004508	XRN2	90	76.368	ENSMAMG00000008633	xrn2	95	71.932	Mastacembelus_armatus
ENSFALG00000004508	XRN2	90	75.116	ENSMZEG00005022362	xrn2	97	75.116	Maylandia_zebra
ENSFALG00000004508	XRN2	99	91.946	ENSMGAG00000003196	XRN2	98	93.576	Meleagris_gallopavo
ENSFALG00000004508	XRN2	100	83.124	ENSMAUG00000021842	Xrn2	100	82.704	Mesocricetus_auratus
ENSFALG00000004508	XRN2	100	82.390	ENSMICG00000008126	XRN2	100	81.971	Microcebus_murinus
ENSFALG00000004508	XRN2	100	83.106	ENSMOCG00000012588	Xrn2	100	82.686	Microtus_ochrogaster
ENSFALG00000004508	XRN2	89	75.000	ENSMMOG00000017576	xrn2	96	75.048	Mola_mola
ENSFALG00000004508	XRN2	100	84.332	ENSMODG00000006163	XRN2	100	84.332	Monodelphis_domestica
ENSFALG00000004508	XRN2	91	73.393	ENSMALG00000011355	xrn2	95	78.119	Monopterus_albus
ENSFALG00000004508	XRN2	100	82.476	MGP_CAROLIEiJ_G0024400	Xrn2	100	82.057	Mus_caroli
ENSFALG00000004508	XRN2	100	82.686	ENSMUSG00000027433	Xrn2	100	82.267	Mus_musculus
ENSFALG00000004508	XRN2	100	82.581	MGP_PahariEiJ_G0025843	Xrn2	100	82.162	Mus_pahari
ENSFALG00000004508	XRN2	100	82.686	MGP_SPRETEiJ_G0025318	Xrn2	100	82.267	Mus_spretus
ENSFALG00000004508	XRN2	100	81.874	ENSMPUG00000001198	XRN2	93	81.462	Mustela_putorius_furo
ENSFALG00000004508	XRN2	100	83.229	ENSMLUG00000001536	XRN2	100	82.809	Myotis_lucifugus
ENSFALG00000004508	XRN2	100	83.229	ENSNGAG00000018138	Xrn2	100	82.809	Nannospalax_galili
ENSFALG00000004508	XRN2	90	75.550	ENSNBRG00000008062	xrn2	97	75.550	Neolamprologus_brichardi
ENSFALG00000004508	XRN2	100	82.914	ENSNLEG00000009991	XRN2	100	82.495	Nomascus_leucogenys
ENSFALG00000004508	XRN2	66	93.333	ENSMEUG00000008622	-	67	93.333	Notamacropus_eugenii
ENSFALG00000004508	XRN2	75	75.263	ENSOPRG00000001397	-	77	75.263	Ochotona_princeps
ENSFALG00000004508	XRN2	98	75.591	ENSODEG00000000860	-	98	76.221	Octodon_degus
ENSFALG00000004508	XRN2	100	83.438	ENSODEG00000010745	-	100	83.019	Octodon_degus
ENSFALG00000004508	XRN2	100	70.062	ENSONIG00000018720	xrn2	100	70.576	Oreochromis_niloticus
ENSFALG00000004508	XRN2	100	83.526	ENSOANG00000015673	XRN2	100	83.526	Ornithorhynchus_anatinus
ENSFALG00000004508	XRN2	100	83.543	ENSOCUG00000013468	XRN2	100	83.124	Oryctolagus_cuniculus
ENSFALG00000004508	XRN2	96	72.649	ENSORLG00000017213	xrn2	99	73.791	Oryzias_latipes
ENSFALG00000004508	XRN2	96	72.835	ENSORLG00020001824	xrn2	95	72.835	Oryzias_latipes_hni
ENSFALG00000004508	XRN2	96	72.462	ENSORLG00015019747	xrn2	95	72.462	Oryzias_latipes_hsok
ENSFALG00000004508	XRN2	89	75.000	ENSOMEG00000019820	xrn2	100	69.898	Oryzias_melastigma
ENSFALG00000004508	XRN2	100	82.531	ENSOGAG00000001068	XRN2	100	82.113	Otolemur_garnettii
ENSFALG00000004508	XRN2	97	82.220	ENSOARG00000004443	XRN2	99	81.789	Ovis_aries
ENSFALG00000004508	XRN2	100	83.019	ENSPPAG00000033549	XRN2	100	82.600	Pan_paniscus
ENSFALG00000004508	XRN2	100	83.124	ENSPPRG00000008732	XRN2	100	82.704	Panthera_pardus
ENSFALG00000004508	XRN2	97	82.866	ENSPTIG00000015683	XRN2	97	82.435	Panthera_tigris_altaica
ENSFALG00000004508	XRN2	100	83.019	ENSPTRG00000013308	XRN2	100	82.600	Pan_troglodytes
ENSFALG00000004508	XRN2	100	83.019	ENSPANG00000018088	XRN2	100	82.600	Papio_anubis
ENSFALG00000004508	XRN2	100	71.750	ENSPKIG00000016889	xrn2	100	71.967	Paramormyrops_kingsleyae
ENSFALG00000004508	XRN2	81	89.974	ENSPSIG00000014666	XRN2	100	89.974	Pelodiscus_sinensis
ENSFALG00000004508	XRN2	100	82.285	ENSPEMG00000000111	Xrn2	100	81.866	Peromyscus_maniculatus_bairdii
ENSFALG00000004508	XRN2	100	69.160	ENSPFOG00000004182	xrn2	97	71.002	Poecilia_formosa
ENSFALG00000004508	XRN2	90	74.625	ENSPLAG00000007351	xrn2	97	74.625	Poecilia_latipinna
ENSFALG00000004508	XRN2	94	68.113	ENSPMEG00000011798	xrn2	97	69.989	Poecilia_mexicana
ENSFALG00000004508	XRN2	90	74.480	ENSPREG00000012452	xrn2	97	74.480	Poecilia_reticulata
ENSFALG00000004508	XRN2	100	82.600	ENSPPYG00000010755	XRN2	100	82.180	Pongo_abelii
ENSFALG00000004508	XRN2	100	78.033	ENSPCAG00000011191	XRN2	100	77.615	Procavia_capensis
ENSFALG00000004508	XRN2	100	75.577	ENSPCOG00000016468	XRN2	100	75.157	Propithecus_coquereli
ENSFALG00000004508	XRN2	93	74.047	ENSPVAG00000004596	XRN2	93	74.047	Pteropus_vampyrus
ENSFALG00000004508	XRN2	90	73.148	ENSPNYG00000001765	xrn2	97	73.148	Pundamilia_nyererei
ENSFALG00000004508	XRN2	100	71.181	ENSPNAG00000010956	xrn2	99	71.181	Pygocentrus_nattereri
ENSFALG00000004508	XRN2	100	82.704	ENSRNOG00000011785	Xrn2	100	82.285	Rattus_norvegicus
ENSFALG00000004508	XRN2	86	87.302	ENSRBIG00000036193	XRN2	100	87.302	Rhinopithecus_bieti
ENSFALG00000004508	XRN2	100	83.019	ENSRROG00000044400	XRN2	90	82.600	Rhinopithecus_roxellana
ENSFALG00000004508	XRN2	63	53.889	YOR048C	RAT1	63	54.126	Saccharomyces_cerevisiae
ENSFALG00000004508	XRN2	100	83.019	ENSSBOG00000021014	XRN2	100	82.600	Saimiri_boliviensis_boliviensis
ENSFALG00000004508	XRN2	100	72.727	ENSSFOG00015001091	xrn2	100	72.727	Scleropages_formosus
ENSFALG00000004508	XRN2	90	75.463	ENSSMAG00000007834	xrn2	96	70.903	Scophthalmus_maximus
ENSFALG00000004508	XRN2	89	73.812	ENSSDUG00000012802	xrn2	98	73.272	Seriola_dumerili
ENSFALG00000004508	XRN2	89	75.939	ENSSLDG00000021273	xrn2	97	75.116	Seriola_lalandi_dorsalis
ENSFALG00000004508	XRN2	76	96.000	ENSSARG00000005859	-	76	96.000	Sorex_araneus
ENSFALG00000004508	XRN2	98	81.217	ENSSPUG00000005485	XRN2	96	81.323	Sphenodon_punctatus
ENSFALG00000004508	XRN2	90	76.130	ENSSPAG00000016027	xrn2	99	70.787	Stegastes_partitus
ENSFALG00000004508	XRN2	100	82.495	ENSSSCG00000007109	XRN2	100	82.075	Sus_scrofa
ENSFALG00000004508	XRN2	100	96.004	ENSTGUG00000007535	XRN2	100	96.004	Taeniopygia_guttata
ENSFALG00000004508	XRN2	100	67.540	ENSTRUG00000015489	xrn2	93	70.518	Takifugu_rubripes
ENSFALG00000004508	XRN2	100	69.547	ENSTNIG00000010712	xrn2	97	70.833	Tetraodon_nigroviridis
ENSFALG00000004508	XRN2	100	82.495	ENSTBEG00000004119	XRN2	100	82.075	Tupaia_belangeri
ENSFALG00000004508	XRN2	93	88.468	ENSTTRG00000009087	XRN2	93	88.468	Tursiops_truncatus
ENSFALG00000004508	XRN2	100	83.333	ENSUAMG00000024634	XRN2	100	82.914	Ursus_americanus
ENSFALG00000004508	XRN2	97	82.866	ENSUMAG00000004012	XRN2	95	82.435	Ursus_maritimus
ENSFALG00000004508	XRN2	89	76.914	ENSVPAG00000010694	XRN2	91	76.443	Vicugna_pacos
ENSFALG00000004508	XRN2	100	83.438	ENSVVUG00000012178	XRN2	100	83.019	Vulpes_vulpes
ENSFALG00000004508	XRN2	100	74.214	ENSXETG00000023501	xrn2	100	74.948	Xenopus_tropicalis
ENSFALG00000004508	XRN2	100	68.955	ENSXMAG00000000242	xrn2	92	80.292	Xiphophorus_maculatus