EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004543 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 23876 bases
Position: chrJH603513.1:16064-39939
Accession: 26114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004736	FDF	PF09532.10	3.1e-14	1	1
ENSFALP00000004736	LSM14	PF12701.7	6.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004760	EDC3-201	4421	-	ENSFALP00000004736	517 (aa)	-	U3JPN2

Gene Model

Click here to download ENSFALG00000004543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004543	EDC3	96	84.569	ENSG00000179151	EDC3	100	98.148	Homo_sapiens
ENSFALG00000004543	EDC3	96	68.800	ENSAPOG00000010791	edc3	98	68.800	Acanthochromis_polyacanthus
ENSFALG00000004543	EDC3	96	54.043	ENSAPOG00000008655	EDC3	98	54.043	Acanthochromis_polyacanthus
ENSFALG00000004543	EDC3	96	84.168	ENSAMEG00000008963	EDC3	98	84.168	Ailuropoda_melanoleuca
ENSFALG00000004543	EDC3	96	67.671	ENSACIG00000017751	edc3	98	67.671	Amphilophus_citrinellus
ENSFALG00000004543	EDC3	96	57.540	ENSACIG00000005330	EDC3	98	57.540	Amphilophus_citrinellus
ENSFALG00000004543	EDC3	96	56.832	ENSAOCG00000009103	-	98	56.832	Amphiprion_ocellaris
ENSFALG00000004543	EDC3	96	68.800	ENSAOCG00000005431	edc3	98	68.800	Amphiprion_ocellaris
ENSFALG00000004543	EDC3	96	56.746	ENSAPEG00000007841	EDC3	98	56.746	Amphiprion_percula
ENSFALG00000004543	EDC3	96	68.800	ENSAPEG00000000968	edc3	98	68.800	Amphiprion_percula
ENSFALG00000004543	EDC3	96	57.339	ENSATEG00000004205	-	98	57.339	Anabas_testudineus
ENSFALG00000004543	EDC3	96	69.679	ENSATEG00000015505	edc3	98	69.679	Anabas_testudineus
ENSFALG00000004543	EDC3	86	90.090	ENSAPLG00000008957	EDC3	98	90.090	Anas_platyrhynchos
ENSFALG00000004543	EDC3	76	85.859	ENSACAG00000000460	-	100	85.859	Anolis_carolinensis
ENSFALG00000004543	EDC3	96	84.770	ENSANAG00000024078	EDC3	98	84.770	Aotus_nancymaae
ENSFALG00000004543	EDC3	96	57.968	ENSACLG00000018776	-	98	57.968	Astatotilapia_calliptera
ENSFALG00000004543	EDC3	96	67.269	ENSACLG00000007232	edc3	98	67.269	Astatotilapia_calliptera
ENSFALG00000004543	EDC3	96	69.080	ENSAMXG00000001589	edc3	98	69.080	Astyanax_mexicanus
ENSFALG00000004543	EDC3	96	84.770	ENSBTAG00000007308	EDC3	98	84.770	Bos_taurus
ENSFALG00000004543	EDC3	96	84.770	ENSCJAG00000017681	EDC3	98	84.770	Callithrix_jacchus
ENSFALG00000004543	EDC3	96	84.369	ENSCAFG00000017935	EDC3	98	84.369	Canis_familiaris
ENSFALG00000004543	EDC3	96	84.369	ENSCAFG00020003909	EDC3	98	84.369	Canis_lupus_dingo
ENSFALG00000004543	EDC3	96	85.371	ENSCHIG00000023658	EDC3	98	85.371	Capra_hircus
ENSFALG00000004543	EDC3	96	84.770	ENSTSYG00000004822	EDC3	98	84.770	Carlito_syrichta
ENSFALG00000004543	EDC3	96	84.569	ENSCPOG00000015595	EDC3	98	84.569	Cavia_porcellus
ENSFALG00000004543	EDC3	96	84.970	ENSCCAG00000021663	EDC3	98	84.970	Cebus_capucinus
ENSFALG00000004543	EDC3	96	85.170	ENSCATG00000037511	EDC3	98	85.170	Cercocebus_atys
ENSFALG00000004543	EDC3	96	83.968	ENSCLAG00000005700	EDC3	98	83.968	Chinchilla_lanigera
ENSFALG00000004543	EDC3	96	85.170	ENSCSAG00000014239	EDC3	98	85.170	Chlorocebus_sabaeus
ENSFALG00000004543	EDC3	96	88.577	ENSCPBG00000024239	EDC3	98	88.577	Chrysemys_picta_bellii
ENSFALG00000004543	EDC3	94	38.048	ENSCING00000022142	-	96	38.048	Ciona_intestinalis
ENSFALG00000004543	EDC3	96	85.170	ENSCANG00000028699	EDC3	98	85.170	Colobus_angolensis_palliatus
ENSFALG00000004543	EDC3	96	85.772	ENSCGRG00001013874	Edc3	98	85.772	Cricetulus_griseus_chok1gshd
ENSFALG00000004543	EDC3	96	85.772	ENSCGRG00000011885	Edc3	98	85.772	Cricetulus_griseus_crigri
ENSFALG00000004543	EDC3	96	69.277	ENSCSEG00000012996	edc3	98	69.277	Cynoglossus_semilaevis
ENSFALG00000004543	EDC3	96	67.671	ENSCVAG00000008023	edc3	98	67.671	Cyprinodon_variegatus
ENSFALG00000004543	EDC3	96	68.327	ENSDARG00000051931	edc3	98	68.327	Danio_rerio
ENSFALG00000004543	EDC3	96	74.704	ENSDNOG00000030661	EDC3	98	74.704	Dasypus_novemcinctus
ENSFALG00000004543	EDC3	61	100.000	ENSETEG00000002398	-	62	100.000	Echinops_telfairi
ENSFALG00000004543	EDC3	96	84.569	ENSEASG00005005071	EDC3	98	84.569	Equus_asinus_asinus
ENSFALG00000004543	EDC3	96	84.569	ENSECAG00000017994	EDC3	98	84.569	Equus_caballus
ENSFALG00000004543	EDC3	96	65.538	ENSELUG00000005794	edc3	98	65.538	Esox_lucius
ENSFALG00000004543	EDC3	96	61.677	ENSELUG00000007607	EDC3	98	61.677	Esox_lucius
ENSFALG00000004543	EDC3	98	82.480	ENSFCAG00000002014	EDC3	98	83.567	Felis_catus
ENSFALG00000004543	EDC3	96	84.369	ENSFDAG00000012582	EDC3	98	84.369	Fukomys_damarensis
ENSFALG00000004543	EDC3	96	69.277	ENSFHEG00000009375	edc3	98	69.277	Fundulus_heteroclitus
ENSFALG00000004543	EDC3	96	67.665	ENSGMOG00000002715	edc3	98	68.064	Gadus_morhua
ENSFALG00000004543	EDC3	96	92.354	ENSGALG00000040181	EDC3	98	92.354	Gallus_gallus
ENSFALG00000004543	EDC3	96	66.466	ENSGAFG00000014433	edc3	98	66.867	Gambusia_affinis
ENSFALG00000004543	EDC3	96	56.275	ENSGACG00000014671	EDC3	98	56.335	Gasterosteus_aculeatus
ENSFALG00000004543	EDC3	96	68.072	ENSGACG00000009783	edc3	98	68.072	Gasterosteus_aculeatus
ENSFALG00000004543	EDC3	96	88.554	ENSGAGG00000023477	EDC3	98	88.554	Gopherus_agassizii
ENSFALG00000004543	EDC3	96	84.569	ENSGGOG00000003552	EDC3	98	84.569	Gorilla_gorilla
ENSFALG00000004543	EDC3	96	67.269	ENSHBUG00000003635	edc3	98	67.269	Haplochromis_burtoni
ENSFALG00000004543	EDC3	96	57.968	ENSHBUG00000020817	EDC3	98	57.968	Haplochromis_burtoni
ENSFALG00000004543	EDC3	96	65.000	ENSHCOG00000016834	edc3	98	66.000	Hippocampus_comes
ENSFALG00000004543	EDC3	96	68.390	ENSIPUG00000005695	edc3	98	68.390	Ictalurus_punctatus
ENSFALG00000004543	EDC3	96	84.970	ENSSTOG00000013936	EDC3	98	84.970	Ictidomys_tridecemlineatus
ENSFALG00000004543	EDC3	96	85.772	ENSJJAG00000008074	Edc3	98	85.772	Jaculus_jaculus
ENSFALG00000004543	EDC3	96	67.671	ENSKMAG00000001243	edc3	98	68.072	Kryptolebias_marmoratus
ENSFALG00000004543	EDC3	96	54.509	ENSKMAG00000001987	EDC3	98	54.509	Kryptolebias_marmoratus
ENSFALG00000004543	EDC3	96	55.754	ENSLBEG00000017984	EDC3	98	55.754	Labrus_bergylta
ENSFALG00000004543	EDC3	96	68.000	ENSLBEG00000013435	edc3	98	68.474	Labrus_bergylta
ENSFALG00000004543	EDC3	96	75.842	ENSLACG00000014149	EDC3	98	75.842	Latimeria_chalumnae
ENSFALG00000004543	EDC3	96	65.737	ENSLOCG00000014625	edc3	98	66.335	Lepisosteus_oculatus
ENSFALG00000004543	EDC3	96	84.337	ENSLAFG00000002992	EDC3	98	84.337	Loxodonta_africana
ENSFALG00000004543	EDC3	96	84.770	ENSMFAG00000043074	EDC3	98	84.770	Macaca_fascicularis
ENSFALG00000004543	EDC3	96	84.770	ENSMMUG00000011071	EDC3	98	84.770	Macaca_mulatta
ENSFALG00000004543	EDC3	96	84.770	ENSMNEG00000035316	EDC3	98	84.770	Macaca_nemestrina
ENSFALG00000004543	EDC3	96	85.170	ENSMLEG00000030372	EDC3	98	85.170	Mandrillus_leucophaeus
ENSFALG00000004543	EDC3	96	68.273	ENSMAMG00000000505	edc3	98	68.273	Mastacembelus_armatus
ENSFALG00000004543	EDC3	96	56.064	ENSMAMG00000005423	-	98	56.064	Mastacembelus_armatus
ENSFALG00000004543	EDC3	96	57.769	ENSMZEG00005005654	EDC3	98	57.769	Maylandia_zebra
ENSFALG00000004543	EDC3	96	67.269	ENSMZEG00005004892	edc3	98	67.269	Maylandia_zebra
ENSFALG00000004543	EDC3	96	91.751	ENSMGAG00000002617	EDC3	98	91.751	Meleagris_gallopavo
ENSFALG00000004543	EDC3	96	84.569	ENSMICG00000043190	EDC3	98	84.569	Microcebus_murinus
ENSFALG00000004543	EDC3	96	85.170	ENSMOCG00000016205	Edc3	98	85.170	Microtus_ochrogaster
ENSFALG00000004543	EDC3	96	67.800	ENSMMOG00000012278	edc3	98	68.273	Mola_mola
ENSFALG00000004543	EDC3	96	87.174	ENSMODG00000009442	EDC3	98	87.174	Monodelphis_domestica
ENSFALG00000004543	EDC3	96	68.876	ENSMALG00000008658	edc3	98	68.876	Monopterus_albus
ENSFALG00000004543	EDC3	96	84.369	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSFALG00000004543	EDC3	96	84.369	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSFALG00000004543	EDC3	96	84.569	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSFALG00000004543	EDC3	96	84.569	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSFALG00000004543	EDC3	96	84.569	ENSMPUG00000017293	EDC3	98	84.569	Mustela_putorius_furo
ENSFALG00000004543	EDC3	96	83.633	ENSMLUG00000016382	EDC3	98	83.633	Myotis_lucifugus
ENSFALG00000004543	EDC3	96	84.569	ENSNGAG00000010923	Edc3	98	84.569	Nannospalax_galili
ENSFALG00000004543	EDC3	96	58.167	ENSNBRG00000007881	EDC3	98	58.167	Neolamprologus_brichardi
ENSFALG00000004543	EDC3	96	67.269	ENSNBRG00000002434	edc3	98	67.269	Neolamprologus_brichardi
ENSFALG00000004543	EDC3	96	75.150	ENSNLEG00000014577	EDC3	98	75.150	Nomascus_leucogenys
ENSFALG00000004543	EDC3	96	86.519	ENSMEUG00000009077	EDC3	98	86.519	Notamacropus_eugenii
ENSFALG00000004543	EDC3	75	98.148	ENSOPRG00000009540	-	77	98.148	Ochotona_princeps
ENSFALG00000004543	EDC3	96	58.020	ENSONIG00000002932	-	98	58.020	Oreochromis_niloticus
ENSFALG00000004543	EDC3	96	67.470	ENSONIG00000008434	edc3	98	67.470	Oreochromis_niloticus
ENSFALG00000004543	EDC3	76	85.606	ENSOCUG00000017740	EDC3	86	85.606	Oryctolagus_cuniculus
ENSFALG00000004543	EDC3	97	54.563	ENSORLG00000014399	-	97	54.563	Oryzias_latipes
ENSFALG00000004543	EDC3	96	67.068	ENSORLG00000004883	edc3	98	67.068	Oryzias_latipes
ENSFALG00000004543	EDC3	96	54.691	ENSORLG00020019446	-	98	54.691	Oryzias_latipes_hni
ENSFALG00000004543	EDC3	96	66.466	ENSORLG00020012262	edc3	98	66.466	Oryzias_latipes_hni
ENSFALG00000004543	EDC3	96	67.068	ENSORLG00015005634	edc3	98	67.068	Oryzias_latipes_hsok
ENSFALG00000004543	EDC3	96	54.382	ENSORLG00015017635	-	94	54.382	Oryzias_latipes_hsok
ENSFALG00000004543	EDC3	96	67.928	ENSOMEG00000014026	edc3	98	68.876	Oryzias_melastigma
ENSFALG00000004543	EDC3	96	54.890	ENSOMEG00000017354	EDC3	98	54.890	Oryzias_melastigma
ENSFALG00000004543	EDC3	96	83.968	ENSOGAG00000014441	EDC3	98	84.569	Otolemur_garnettii
ENSFALG00000004543	EDC3	96	85.000	ENSOARG00000003476	EDC3	98	85.200	Ovis_aries
ENSFALG00000004543	EDC3	96	84.569	ENSPPAG00000040143	EDC3	98	84.569	Pan_paniscus
ENSFALG00000004543	EDC3	96	83.968	ENSPPRG00000006257	EDC3	98	83.968	Panthera_pardus
ENSFALG00000004543	EDC3	96	83.968	ENSPTIG00000017424	EDC3	98	83.968	Panthera_tigris_altaica
ENSFALG00000004543	EDC3	96	84.569	ENSPTRG00000007279	EDC3	98	84.569	Pan_troglodytes
ENSFALG00000004543	EDC3	96	85.170	ENSPANG00000015997	EDC3	98	85.170	Papio_anubis
ENSFALG00000004543	EDC3	96	65.737	ENSPKIG00000004416	edc3	98	67.131	Paramormyrops_kingsleyae
ENSFALG00000004543	EDC3	96	66.467	ENSPKIG00000019810	EDC3	98	66.467	Paramormyrops_kingsleyae
ENSFALG00000004543	EDC3	88	87.118	ENSPSIG00000008474	EDC3	94	87.118	Pelodiscus_sinensis
ENSFALG00000004543	EDC3	96	67.400	ENSPMGG00000007223	edc3	98	67.400	Periophthalmus_magnuspinnatus
ENSFALG00000004543	EDC3	96	85.571	ENSPEMG00000015260	Edc3	98	85.571	Peromyscus_maniculatus_bairdii
ENSFALG00000004543	EDC3	96	85.915	ENSPCIG00000006276	EDC3	69	85.915	Phascolarctos_cinereus
ENSFALG00000004543	EDC3	96	67.871	ENSPFOG00000012204	edc3	98	67.871	Poecilia_formosa
ENSFALG00000004543	EDC3	96	67.871	ENSPLAG00000014420	edc3	98	67.871	Poecilia_latipinna
ENSFALG00000004543	EDC3	96	67.871	ENSPMEG00000023289	edc3	98	67.871	Poecilia_mexicana
ENSFALG00000004543	EDC3	96	68.072	ENSPREG00000016022	edc3	98	68.072	Poecilia_reticulata
ENSFALG00000004543	EDC3	96	83.367	ENSPPYG00000006642	EDC3	98	83.367	Pongo_abelii
ENSFALG00000004543	EDC3	84	98.148	ENSPCAG00000002802	EDC3	86	98.148	Procavia_capensis
ENSFALG00000004543	EDC3	96	85.371	ENSPCOG00000013364	EDC3	98	85.371	Propithecus_coquereli
ENSFALG00000004543	EDC3	96	83.968	ENSPVAG00000014733	EDC3	98	83.968	Pteropus_vampyrus
ENSFALG00000004543	EDC3	96	67.269	ENSPNYG00000021797	edc3	98	67.269	Pundamilia_nyererei
ENSFALG00000004543	EDC3	96	57.968	ENSPNYG00000009669	EDC3	98	57.968	Pundamilia_nyererei
ENSFALG00000004543	EDC3	96	68.245	ENSPNAG00000019657	edc3	98	68.245	Pygocentrus_nattereri
ENSFALG00000004543	EDC3	95	84.677	ENSRNOG00000019579	Edc3	98	85.282	Rattus_norvegicus
ENSFALG00000004543	EDC3	96	84.970	ENSRBIG00000019488	EDC3	98	84.970	Rhinopithecus_bieti
ENSFALG00000004543	EDC3	96	84.970	ENSRROG00000034959	EDC3	98	84.970	Rhinopithecus_roxellana
ENSFALG00000004543	EDC3	96	85.170	ENSSBOG00000004896	EDC3	98	85.170	Saimiri_boliviensis_boliviensis
ENSFALG00000004543	EDC3	94	87.885	ENSSHAG00000015075	EDC3	95	87.885	Sarcophilus_harrisii
ENSFALG00000004543	EDC3	96	63.221	ENSSFOG00015002439	edc3	98	63.221	Scleropages_formosus
ENSFALG00000004543	EDC3	96	71.769	ENSSFOG00015016939	edc3	98	71.769	Scleropages_formosus
ENSFALG00000004543	EDC3	96	54.960	ENSSMAG00000010176	-	98	54.960	Scophthalmus_maximus
ENSFALG00000004543	EDC3	96	68.273	ENSSMAG00000010695	edc3	98	68.474	Scophthalmus_maximus
ENSFALG00000004543	EDC3	96	68.675	ENSSDUG00000021844	edc3	98	69.277	Seriola_dumerili
ENSFALG00000004543	EDC3	96	57.760	ENSSDUG00000007671	EDC3	98	57.760	Seriola_dumerili
ENSFALG00000004543	EDC3	99	66.414	ENSSLDG00000022046	edc3	98	69.277	Seriola_lalandi_dorsalis
ENSFALG00000004543	EDC3	77	86.611	ENSSARG00000003907	EDC3	79	86.611	Sorex_araneus
ENSFALG00000004543	EDC3	96	88.577	ENSSPUG00000008232	EDC3	98	88.577	Sphenodon_punctatus
ENSFALG00000004543	EDC3	96	69.076	ENSSPAG00000010009	edc3	98	69.076	Stegastes_partitus
ENSFALG00000004543	EDC3	96	55.952	ENSSPAG00000020327	EDC3	98	56.548	Stegastes_partitus
ENSFALG00000004543	EDC3	96	84.369	ENSSSCG00000001903	EDC3	98	84.369	Sus_scrofa
ENSFALG00000004543	EDC3	96	94.165	ENSTGUG00000004007	EDC3	98	94.165	Taeniopygia_guttata
ENSFALG00000004543	EDC3	96	68.675	ENSTRUG00000017078	edc3	98	68.675	Takifugu_rubripes
ENSFALG00000004543	EDC3	96	68.600	ENSTNIG00000016047	edc3	98	68.600	Tetraodon_nigroviridis
ENSFALG00000004543	EDC3	96	84.538	ENSTTRG00000007990	EDC3	98	84.538	Tursiops_truncatus
ENSFALG00000004543	EDC3	96	84.168	ENSUAMG00000026710	-	98	84.168	Ursus_americanus
ENSFALG00000004543	EDC3	99	82.651	ENSUMAG00000005006	EDC3	96	82.651	Ursus_maritimus
ENSFALG00000004543	EDC3	75	85.185	ENSVPAG00000003499	-	77	85.185	Vicugna_pacos
ENSFALG00000004543	EDC3	96	84.369	ENSVVUG00000018601	EDC3	98	84.369	Vulpes_vulpes
ENSFALG00000004543	EDC3	65	79.646	ENSXETG00000010622	edc3	97	80.826	Xenopus_tropicalis
ENSFALG00000004543	EDC3	96	68.273	ENSXMAG00000007377	edc3	98	68.273	Xiphophorus_maculatus