EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004611 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 10670 bases
Position: chrJH603336.1:386180-396849
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004800	HAT	PF02184.16	1.2e-37	1	2
ENSFALP00000004800	HAT	PF02184.16	1.2e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004824	CRNKL1-201	2516	-	ENSFALP00000004800	672 (aa)	-	U3JPU6

Gene Model

Click here to download ENSFALG00000004611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004611	CRNKL1	100	91.667	ENSG00000101343	CRNKL1	98	91.667	Homo_sapiens
ENSFALG00000004611	CRNKL1	100	85.119	ENSAPOG00000009705	crnkl1	95	85.432	Acanthochromis_polyacanthus
ENSFALG00000004611	CRNKL1	100	92.113	ENSAMEG00000000270	CRNKL1	81	92.113	Ailuropoda_melanoleuca
ENSFALG00000004611	CRNKL1	97	86.064	ENSACIG00000015267	crnkl1	87	86.064	Amphilophus_citrinellus
ENSFALG00000004611	CRNKL1	100	85.268	ENSAOCG00000021964	crnkl1	89	85.268	Amphiprion_ocellaris
ENSFALG00000004611	CRNKL1	100	85.119	ENSAPEG00000015041	crnkl1	89	85.119	Amphiprion_percula
ENSFALG00000004611	CRNKL1	99	85.135	ENSATEG00000001068	crnkl1	87	85.135	Anabas_testudineus
ENSFALG00000004611	CRNKL1	99	95.529	ENSAPLG00000013105	CRNKL1	98	95.529	Anas_platyrhynchos
ENSFALG00000004611	CRNKL1	99	92.090	ENSACAG00000005284	CRNKL1	98	92.090	Anolis_carolinensis
ENSFALG00000004611	CRNKL1	92	92.545	ENSANAG00000024889	CRNKL1	97	92.545	Aotus_nancymaae
ENSFALG00000004611	CRNKL1	99	85.994	ENSACLG00000010813	crnkl1	86	87.136	Astatotilapia_calliptera
ENSFALG00000004611	CRNKL1	97	87.558	ENSAMXG00000018334	crnkl1	88	87.634	Astyanax_mexicanus
ENSFALG00000004611	CRNKL1	100	91.071	ENSBTAG00000008472	CRNKL1	97	91.071	Bos_taurus
ENSFALG00000004611	CRNKL1	96	61.742	WBGene00019762	M03F8.3	90	61.161	Caenorhabditis_elegans
ENSFALG00000004611	CRNKL1	100	91.518	ENSCJAG00000005393	CRNKL1	98	91.518	Callithrix_jacchus
ENSFALG00000004611	CRNKL1	100	91.815	ENSCAFG00000005333	CRNKL1	92	91.815	Canis_familiaris
ENSFALG00000004611	CRNKL1	100	91.815	ENSCAFG00020027488	CRNKL1	98	91.815	Canis_lupus_dingo
ENSFALG00000004611	CRNKL1	100	90.327	ENSCHIG00000013171	CRNKL1	97	90.327	Capra_hircus
ENSFALG00000004611	CRNKL1	100	91.667	ENSTSYG00000004197	CRNKL1	98	91.667	Carlito_syrichta
ENSFALG00000004611	CRNKL1	98	90.161	ENSCAPG00000010501	CRNKL1	99	90.161	Cavia_aperea
ENSFALG00000004611	CRNKL1	100	90.476	ENSCPOG00000004418	CRNKL1	98	90.476	Cavia_porcellus
ENSFALG00000004611	CRNKL1	100	91.518	ENSCCAG00000027037	CRNKL1	98	91.518	Cebus_capucinus
ENSFALG00000004611	CRNKL1	100	91.518	ENSCATG00000034247	CRNKL1	98	91.518	Cercocebus_atys
ENSFALG00000004611	CRNKL1	100	91.220	ENSCLAG00000013859	CRNKL1	98	91.220	Chinchilla_lanigera
ENSFALG00000004611	CRNKL1	100	91.518	ENSCSAG00000011434	CRNKL1	98	91.518	Chlorocebus_sabaeus
ENSFALG00000004611	CRNKL1	100	91.369	ENSCHOG00000006371	CRNKL1	82	91.369	Choloepus_hoffmanni
ENSFALG00000004611	CRNKL1	100	93.006	ENSCPBG00000023501	CRNKL1	98	93.006	Chrysemys_picta_bellii
ENSFALG00000004611	CRNKL1	97	67.994	ENSCING00000002709	-	96	67.375	Ciona_intestinalis
ENSFALG00000004611	CRNKL1	100	91.667	ENSCANG00000038789	CRNKL1	98	91.667	Colobus_angolensis_palliatus
ENSFALG00000004611	CRNKL1	100	91.369	ENSCGRG00001000687	-	97	91.369	Cricetulus_griseus_chok1gshd
ENSFALG00000004611	CRNKL1	100	91.369	ENSCGRG00001001115	-	97	91.369	Cricetulus_griseus_chok1gshd
ENSFALG00000004611	CRNKL1	100	91.369	ENSCGRG00000007854	Crnkl1	97	91.369	Cricetulus_griseus_crigri
ENSFALG00000004611	CRNKL1	99	85.650	ENSCSEG00000005594	crnkl1	84	85.650	Cynoglossus_semilaevis
ENSFALG00000004611	CRNKL1	97	86.677	ENSCVAG00000015172	crnkl1	88	86.677	Cyprinodon_variegatus
ENSFALG00000004611	CRNKL1	97	86.749	ENSDARG00000007901	crnkl1	88	85.522	Danio_rerio
ENSFALG00000004611	CRNKL1	99	92.078	ENSDNOG00000016226	CRNKL1	93	92.078	Dasypus_novemcinctus
ENSFALG00000004611	CRNKL1	100	90.399	ENSDORG00000000394	-	98	90.399	Dipodomys_ordii
ENSFALG00000004611	CRNKL1	98	83.837	ENSDORG00000023724	-	98	83.837	Dipodomys_ordii
ENSFALG00000004611	CRNKL1	97	83.969	ENSDORG00000030174	-	97	83.969	Dipodomys_ordii
ENSFALG00000004611	CRNKL1	98	67.722	FBgn0000377	crn	94	67.722	Drosophila_melanogaster
ENSFALG00000004611	CRNKL1	100	79.613	ENSETEG00000003711	CRNKL1	82	79.613	Echinops_telfairi
ENSFALG00000004611	CRNKL1	99	59.960	ENSEBUG00000013461	crnkl1	83	59.960	Eptatretus_burgeri
ENSFALG00000004611	CRNKL1	100	91.964	ENSEASG00005002072	CRNKL1	98	91.964	Equus_asinus_asinus
ENSFALG00000004611	CRNKL1	100	91.964	ENSECAG00000022215	CRNKL1	98	91.964	Equus_caballus
ENSFALG00000004611	CRNKL1	100	89.137	ENSEEUG00000000413	CRNKL1	90	89.137	Erinaceus_europaeus
ENSFALG00000004611	CRNKL1	97	85.191	ENSELUG00000015424	crnkl1	95	83.458	Esox_lucius
ENSFALG00000004611	CRNKL1	100	92.113	ENSFCAG00000000714	CRNKL1	98	92.113	Felis_catus
ENSFALG00000004611	CRNKL1	100	91.369	ENSFDAG00000000604	CRNKL1	98	91.369	Fukomys_damarensis
ENSFALG00000004611	CRNKL1	97	86.371	ENSFHEG00000013163	crnkl1	85	86.371	Fundulus_heteroclitus
ENSFALG00000004611	CRNKL1	97	85.015	ENSGMOG00000007609	crnkl1	92	83.333	Gadus_morhua
ENSFALG00000004611	CRNKL1	100	95.536	ENSGALG00000008429	CRNKL1	98	95.536	Gallus_gallus
ENSFALG00000004611	CRNKL1	97	86.524	ENSGAFG00000014249	crnkl1	86	86.524	Gambusia_affinis
ENSFALG00000004611	CRNKL1	97	84.992	ENSGACG00000011852	crnkl1	87	84.992	Gasterosteus_aculeatus
ENSFALG00000004611	CRNKL1	98	92.085	ENSGAGG00000021233	CRNKL1	100	92.085	Gopherus_agassizii
ENSFALG00000004611	CRNKL1	100	91.667	ENSGGOG00000014176	CRNKL1	98	91.667	Gorilla_gorilla
ENSFALG00000004611	CRNKL1	99	85.843	ENSHBUG00000005246	crnkl1	86	86.983	Haplochromis_burtoni
ENSFALG00000004611	CRNKL1	100	91.071	ENSHGLG00000010856	CRNKL1	98	91.071	Heterocephalus_glaber_female
ENSFALG00000004611	CRNKL1	100	91.071	ENSHGLG00100011521	CRNKL1	98	91.071	Heterocephalus_glaber_male
ENSFALG00000004611	CRNKL1	98	84.604	ENSHCOG00000006420	crnkl1	96	83.408	Hippocampus_comes
ENSFALG00000004611	CRNKL1	97	87.673	ENSIPUG00000006751	crnkl1	93	85.821	Ictalurus_punctatus
ENSFALG00000004611	CRNKL1	97	76.308	ENSIPUG00000006836	-	96	76.067	Ictalurus_punctatus
ENSFALG00000004611	CRNKL1	92	68.489	ENSIPUG00000000315	-	97	69.726	Ictalurus_punctatus
ENSFALG00000004611	CRNKL1	100	91.518	ENSSTOG00000014747	CRNKL1	98	91.518	Ictidomys_tridecemlineatus
ENSFALG00000004611	CRNKL1	100	89.665	ENSJJAG00000016926	Crnkl1	98	89.665	Jaculus_jaculus
ENSFALG00000004611	CRNKL1	99	85.501	ENSKMAG00000003620	crnkl1	85	85.501	Kryptolebias_marmoratus
ENSFALG00000004611	CRNKL1	97	60.578	ENSLBEG00000003543	crnkl1	90	69.598	Labrus_bergylta
ENSFALG00000004611	CRNKL1	99	87.015	ENSLACG00000001129	CRNKL1	98	87.015	Latimeria_chalumnae
ENSFALG00000004611	CRNKL1	97	89.247	ENSLOCG00000016889	crnkl1	91	89.041	Lepisosteus_oculatus
ENSFALG00000004611	CRNKL1	99	91.742	ENSLAFG00000004512	CRNKL1	98	91.667	Loxodonta_africana
ENSFALG00000004611	CRNKL1	100	91.518	ENSMFAG00000039893	CRNKL1	98	91.518	Macaca_fascicularis
ENSFALG00000004611	CRNKL1	100	91.518	ENSMMUG00000007709	CRNKL1	98	91.518	Macaca_mulatta
ENSFALG00000004611	CRNKL1	100	91.518	ENSMNEG00000037490	CRNKL1	98	91.518	Macaca_nemestrina
ENSFALG00000004611	CRNKL1	100	91.518	ENSMLEG00000034885	CRNKL1	98	91.518	Mandrillus_leucophaeus
ENSFALG00000004611	CRNKL1	99	85.307	ENSMAMG00000008757	crnkl1	88	85.307	Mastacembelus_armatus
ENSFALG00000004611	CRNKL1	99	85.994	ENSMZEG00005022345	crnkl1	88	85.994	Maylandia_zebra
ENSFALG00000004611	CRNKL1	100	95.982	ENSMGAG00000003452	CRNKL1	92	95.982	Meleagris_gallopavo
ENSFALG00000004611	CRNKL1	100	91.220	ENSMAUG00000020764	Crnkl1	97	91.220	Mesocricetus_auratus
ENSFALG00000004611	CRNKL1	100	91.815	ENSMICG00000006048	CRNKL1	98	91.815	Microcebus_murinus
ENSFALG00000004611	CRNKL1	97	65.284	ENSMOCG00000004179	-	93	65.402	Microtus_ochrogaster
ENSFALG00000004611	CRNKL1	95	87.348	ENSMOCG00000000681	-	98	87.348	Microtus_ochrogaster
ENSFALG00000004611	CRNKL1	92	84.765	ENSMMOG00000017601	crnkl1	95	84.765	Mola_mola
ENSFALG00000004611	CRNKL1	100	85.119	ENSMODG00000010857	-	97	85.119	Monodelphis_domestica
ENSFALG00000004611	CRNKL1	100	89.412	ENSMODG00000005961	-	97	89.412	Monodelphis_domestica
ENSFALG00000004611	CRNKL1	98	62.689	ENSMALG00000011211	crnkl1	86	61.991	Monopterus_albus
ENSFALG00000004611	CRNKL1	100	91.369	MGP_CAROLIEiJ_G0024394	Crnkl1	97	91.369	Mus_caroli
ENSFALG00000004611	CRNKL1	100	91.518	ENSMUSG00000001767	Crnkl1	97	91.518	Mus_musculus
ENSFALG00000004611	CRNKL1	100	90.476	MGP_PahariEiJ_G0025838	Crnkl1	97	90.476	Mus_pahari
ENSFALG00000004611	CRNKL1	100	91.518	MGP_SPRETEiJ_G0025312	Crnkl1	97	91.518	Mus_spretus
ENSFALG00000004611	CRNKL1	100	92.262	ENSMPUG00000001226	CRNKL1	98	92.262	Mustela_putorius_furo
ENSFALG00000004611	CRNKL1	100	92.262	ENSMLUG00000016513	CRNKL1	87	92.262	Myotis_lucifugus
ENSFALG00000004611	CRNKL1	100	89.620	ENSNGAG00000023097	Crnkl1	98	89.620	Nannospalax_galili
ENSFALG00000004611	CRNKL1	99	86.145	ENSNBRG00000007867	crnkl1	86	87.289	Neolamprologus_brichardi
ENSFALG00000004611	CRNKL1	100	88.095	ENSNLEG00000009862	CRNKL1	98	88.095	Nomascus_leucogenys
ENSFALG00000004611	CRNKL1	99	92.101	ENSMEUG00000012167	-	100	92.101	Notamacropus_eugenii
ENSFALG00000004611	CRNKL1	100	84.101	ENSMEUG00000002361	-	98	84.101	Notamacropus_eugenii
ENSFALG00000004611	CRNKL1	88	61.612	ENSOPRG00000009242	-	62	61.612	Ochotona_princeps
ENSFALG00000004611	CRNKL1	100	91.369	ENSODEG00000012175	CRNKL1	98	91.369	Octodon_degus
ENSFALG00000004611	CRNKL1	97	87.136	ENSONIG00000018728	crnkl1	86	87.136	Oreochromis_niloticus
ENSFALG00000004611	CRNKL1	98	91.831	ENSOCUG00000015484	CRNKL1	80	91.779	Oryctolagus_cuniculus
ENSFALG00000004611	CRNKL1	97	84.227	ENSORLG00000017240	crnkl1	92	80.577	Oryzias_latipes
ENSFALG00000004611	CRNKL1	97	84.380	ENSORLG00020001742	crnkl1	87	84.380	Oryzias_latipes_hni
ENSFALG00000004611	CRNKL1	97	84.380	ENSORLG00015019564	crnkl1	87	84.380	Oryzias_latipes_hsok
ENSFALG00000004611	CRNKL1	99	83.109	ENSOMEG00000019895	crnkl1	89	83.109	Oryzias_melastigma
ENSFALG00000004611	CRNKL1	100	91.369	ENSOGAG00000011544	CRNKL1	98	91.369	Otolemur_garnettii
ENSFALG00000004611	CRNKL1	100	91.369	ENSOARG00000002150	CRNKL1	87	91.369	Ovis_aries
ENSFALG00000004611	CRNKL1	100	90.476	ENSPPAG00000027847	CRNKL1	81	90.476	Pan_paniscus
ENSFALG00000004611	CRNKL1	100	92.113	ENSPPRG00000001955	CRNKL1	98	92.113	Panthera_pardus
ENSFALG00000004611	CRNKL1	100	92.113	ENSPTIG00000007393	CRNKL1	98	92.113	Panthera_tigris_altaica
ENSFALG00000004611	CRNKL1	100	91.518	ENSPTRG00000030609	CRNKL1	98	91.518	Pan_troglodytes
ENSFALG00000004611	CRNKL1	100	91.518	ENSPANG00000017420	CRNKL1	98	91.518	Papio_anubis
ENSFALG00000004611	CRNKL1	97	82.181	ENSPKIG00000017093	crnkl1	87	81.194	Paramormyrops_kingsleyae
ENSFALG00000004611	CRNKL1	100	93.006	ENSPSIG00000012705	CRNKL1	98	93.006	Pelodiscus_sinensis
ENSFALG00000004611	CRNKL1	99	78.326	ENSPMGG00000006263	crnkl1	94	78.326	Periophthalmus_magnuspinnatus
ENSFALG00000004611	CRNKL1	100	91.667	ENSPEMG00000000073	-	97	91.667	Peromyscus_maniculatus_bairdii
ENSFALG00000004611	CRNKL1	99	81.751	ENSPMAG00000002250	crnkl1	97	81.751	Petromyzon_marinus
ENSFALG00000004611	CRNKL1	100	91.369	ENSPCIG00000025825	CRNKL1	94	91.369	Phascolarctos_cinereus
ENSFALG00000004611	CRNKL1	97	86.371	ENSPFOG00000005102	crnkl1	88	86.371	Poecilia_formosa
ENSFALG00000004611	CRNKL1	97	86.371	ENSPLAG00000007288	crnkl1	85	86.371	Poecilia_latipinna
ENSFALG00000004611	CRNKL1	97	86.524	ENSPMEG00000008865	crnkl1	89	86.524	Poecilia_mexicana
ENSFALG00000004611	CRNKL1	97	86.064	ENSPREG00000012615	crnkl1	88	85.693	Poecilia_reticulata
ENSFALG00000004611	CRNKL1	100	91.667	ENSPPYG00000010747	CRNKL1	79	91.667	Pongo_abelii
ENSFALG00000004611	CRNKL1	100	86.012	ENSPCAG00000003296	CRNKL1	83	86.012	Procavia_capensis
ENSFALG00000004611	CRNKL1	100	91.071	ENSPCOG00000017608	CRNKL1	81	91.071	Propithecus_coquereli
ENSFALG00000004611	CRNKL1	100	91.518	ENSPVAG00000006207	CRNKL1	81	91.518	Pteropus_vampyrus
ENSFALG00000004611	CRNKL1	99	85.843	ENSPNYG00000001977	crnkl1	86	86.983	Pundamilia_nyererei
ENSFALG00000004611	CRNKL1	98	88.128	ENSPNAG00000001507	crnkl1	96	83.952	Pygocentrus_nattereri
ENSFALG00000004611	CRNKL1	100	91.220	ENSRNOG00000040045	Crnkl1	97	91.220	Rattus_norvegicus
ENSFALG00000004611	CRNKL1	100	91.518	ENSRNOG00000010587	Crnkl1	97	91.518	Rattus_norvegicus
ENSFALG00000004611	CRNKL1	100	91.369	ENSRBIG00000031770	CRNKL1	98	91.369	Rhinopithecus_bieti
ENSFALG00000004611	CRNKL1	100	91.220	ENSRROG00000040450	CRNKL1	98	91.220	Rhinopithecus_roxellana
ENSFALG00000004611	CRNKL1	96	37.391	YLR117C	CLF1	99	37.627	Saccharomyces_cerevisiae
ENSFALG00000004611	CRNKL1	100	91.518	ENSSBOG00000029672	CRNKL1	98	91.518	Saimiri_boliviensis_boliviensis
ENSFALG00000004611	CRNKL1	97	74.693	ENSSHAG00000011199	CRNKL1	98	74.693	Sarcophilus_harrisii
ENSFALG00000004611	CRNKL1	97	87.057	ENSSFOG00015000946	crnkl1	87	85.395	Scleropages_formosus
ENSFALG00000004611	CRNKL1	99	84.328	ENSSMAG00000007933	crnkl1	87	84.328	Scophthalmus_maximus
ENSFALG00000004611	CRNKL1	99	78.797	ENSSDUG00000012625	crnkl1	85	78.797	Seriola_dumerili
ENSFALG00000004611	CRNKL1	99	85.714	ENSSLDG00000021413	crnkl1	86	85.714	Seriola_lalandi_dorsalis
ENSFALG00000004611	CRNKL1	100	91.369	ENSSARG00000006443	CRNKL1	80	91.369	Sorex_araneus
ENSFALG00000004611	CRNKL1	99	90.896	ENSSPUG00000005254	CRNKL1	98	90.896	Sphenodon_punctatus
ENSFALG00000004611	CRNKL1	97	86.830	ENSSPAG00000016150	crnkl1	84	86.830	Stegastes_partitus
ENSFALG00000004611	CRNKL1	100	91.815	ENSSSCG00000038587	CRNKL1	97	91.815	Sus_scrofa
ENSFALG00000004611	CRNKL1	100	97.768	ENSTGUG00000007645	CRNKL1	96	97.768	Taeniopygia_guttata
ENSFALG00000004611	CRNKL1	99	78.457	ENSTRUG00000015417	crnkl1	88	80.030	Takifugu_rubripes
ENSFALG00000004611	CRNKL1	97	86.371	ENSTNIG00000010710	crnkl1	97	84.524	Tetraodon_nigroviridis
ENSFALG00000004611	CRNKL1	92	90.276	ENSTBEG00000001304	CRNKL1	80	90.276	Tupaia_belangeri
ENSFALG00000004611	CRNKL1	92	88.169	ENSTTRG00000000484	CRNKL1	79	88.169	Tursiops_truncatus
ENSFALG00000004611	CRNKL1	100	92.113	ENSUAMG00000018586	CRNKL1	98	92.113	Ursus_americanus
ENSFALG00000004611	CRNKL1	100	92.113	ENSUMAG00000024957	CRNKL1	98	92.113	Ursus_maritimus
ENSFALG00000004611	CRNKL1	100	91.815	ENSVVUG00000012559	CRNKL1	80	91.815	Vulpes_vulpes
ENSFALG00000004611	CRNKL1	100	88.856	ENSXETG00000009698	crnkl1	98	88.856	Xenopus_tropicalis
ENSFALG00000004611	CRNKL1	97	85.911	ENSXCOG00000000824	crnkl1	87	85.911	Xiphophorus_couchianus
ENSFALG00000004611	CRNKL1	97	86.830	ENSXMAG00000006896	crnkl1	87	86.830	Xiphophorus_maculatus