EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004633 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 4954 bases
Position: chrJH603404.1:349947-354900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004832	zf-CCCH	PF00642.24	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004856	-	912	-	ENSFALP00000004832	304 (aa)	-	U3JPX8

Gene Model

Click here to download ENSFALG00000004633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004633	-	96	78.378	ENSG00000125352	RNF113A	83	80.919	Homo_sapiens
ENSFALG00000004633	-	92	64.769	ENSG00000139797	RNF113B	83	65.580	Homo_sapiens
ENSFALG00000004633	-	95	76.471	ENSAPOG00000017510	rnf113a	85	79.348	Acanthochromis_polyacanthus
ENSFALG00000004633	-	94	78.201	ENSAMEG00000019845	-	83	78.819	Ailuropoda_melanoleuca
ENSFALG00000004633	-	78	78.151	ENSACIG00000007458	rnf113a	78	78.367	Amphilophus_citrinellus
ENSFALG00000004633	-	95	76.817	ENSAOCG00000003485	rnf113a	85	79.710	Amphiprion_ocellaris
ENSFALG00000004633	-	95	76.817	ENSAPEG00000001084	rnf113a	85	79.710	Amphiprion_percula
ENSFALG00000004633	-	95	76.207	ENSATEG00000022950	rnf113a	86	78.136	Anabas_testudineus
ENSFALG00000004633	-	88	91.882	ENSAPLG00000012510	-	94	95.294	Anas_platyrhynchos
ENSFALG00000004633	-	85	87.209	ENSACAG00000012485	-	91	82.746	Anolis_carolinensis
ENSFALG00000004633	-	87	82.397	ENSANAG00000024332	-	82	81.818	Aotus_nancymaae
ENSFALG00000004633	-	96	76.949	ENSANAG00000013925	-	83	79.433	Aotus_nancymaae
ENSFALG00000004633	-	93	64.912	ENSANAG00000020431	RNF113B	83	66.667	Aotus_nancymaae
ENSFALG00000004633	-	94	77.586	ENSACLG00000025256	rnf113a	83	84.615	Astatotilapia_calliptera
ENSFALG00000004633	-	93	76.408	ENSAMXG00000011273	rnf113a	85	78.986	Astyanax_mexicanus
ENSFALG00000004633	-	93	78.947	ENSBTAG00000006034	RNF113A	81	81.004	Bos_taurus
ENSFALG00000004633	-	94	73.868	ENSBTAG00000008684	-	83	73.103	Bos_taurus
ENSFALG00000004633	-	95	45.392	WBGene00010476	rnf-113	76	45.424	Caenorhabditis_elegans
ENSFALG00000004633	-	94	78.125	ENSCJAG00000022327	RNF113A	81	80.287	Callithrix_jacchus
ENSFALG00000004633	-	77	76.395	ENSCJAG00000004501	RNF113B	83	69.065	Callithrix_jacchus
ENSFALG00000004633	-	93	78.125	ENSCAFG00000018430	-	81	80.565	Canis_familiaris
ENSFALG00000004633	-	95	65.886	ENSCAFG00000018373	-	81	70.671	Canis_familiaris
ENSFALG00000004633	-	93	78.125	ENSCAFG00020004044	-	81	80.565	Canis_lupus_dingo
ENSFALG00000004633	-	79	76.151	ENSCAFG00020020280	-	81	71.025	Canis_lupus_dingo
ENSFALG00000004633	-	96	72.014	ENSCHIG00000015616	-	81	75.000	Capra_hircus
ENSFALG00000004633	-	93	79.298	ENSCHIG00000018820	-	81	81.362	Capra_hircus
ENSFALG00000004633	-	92	78.169	ENSTSYG00000001308	RNF113A	81	80.714	Carlito_syrichta
ENSFALG00000004633	-	100	76.974	ENSCPOG00000038517	-	86	79.038	Cavia_porcellus
ENSFALG00000004633	-	74	79.018	ENSCCAG00000021327	RNF113B	83	68.841	Cebus_capucinus
ENSFALG00000004633	-	94	78.819	ENSCCAG00000013617	RNF113A	81	81.004	Cebus_capucinus
ENSFALG00000004633	-	93	79.720	ENSCATG00000002702	RNF113A	81	81.295	Cercocebus_atys
ENSFALG00000004633	-	96	77.517	ENSCLAG00000017479	-	82	80.282	Chinchilla_lanigera
ENSFALG00000004633	-	79	72.083	ENSCSAG00000000222	RNF113B	80	65.950	Chlorocebus_sabaeus
ENSFALG00000004633	-	76	79.565	ENSCSAG00000019472	-	81	70.107	Chlorocebus_sabaeus
ENSFALG00000004633	-	70	80.282	ENSCHOG00000008711	-	83	80.090	Choloepus_hoffmanni
ENSFALG00000004633	-	96	85.911	ENSCPBG00000026980	-	86	87.410	Chrysemys_picta_bellii
ENSFALG00000004633	-	87	68.045	ENSCING00000009197	-	84	67.883	Ciona_intestinalis
ENSFALG00000004633	-	76	72.727	ENSCSAVG00000006210	-	85	66.667	Ciona_savignyi
ENSFALG00000004633	-	96	78.041	ENSCANG00000037715	RNF113A	81	81.295	Colobus_angolensis_palliatus
ENSFALG00000004633	-	77	72.103	ENSCANG00000041552	RNF113B	85	64.875	Colobus_angolensis_palliatus
ENSFALG00000004633	-	93	79.078	ENSCGRG00001002251	Rnf113a1	80	81.091	Cricetulus_griseus_chok1gshd
ENSFALG00000004633	-	89	78.755	ENSCGRG00000016675	Rnf113a2	82	79.061	Cricetulus_griseus_crigri
ENSFALG00000004633	-	93	78.723	ENSCGRG00000019441	Rnf113a1	80	80.727	Cricetulus_griseus_crigri
ENSFALG00000004633	-	95	75.862	ENSCSEG00000021570	rnf113a	74	77.778	Cynoglossus_semilaevis
ENSFALG00000004633	-	95	75.862	ENSCVAG00000011305	rnf113a	86	78.136	Cyprinodon_variegatus
ENSFALG00000004633	-	95	76.471	ENSDARG00000037930	rnf113a	86	78.417	Danio_rerio
ENSFALG00000004633	-	93	75.352	ENSDORG00000027624	Rnf113a2	82	76.978	Dipodomys_ordii
ENSFALG00000004633	-	90	60.702	FBgn0038772	mdlc	80	60.976	Drosophila_melanogaster
ENSFALG00000004633	-	92	78.648	ENSETEG00000018346	-	81	80.866	Echinops_telfairi
ENSFALG00000004633	-	91	76.895	ENSEBUG00000016079	rnf113a	84	76.895	Eptatretus_burgeri
ENSFALG00000004633	-	94	77.778	ENSEASG00005010538	-	85	76.451	Equus_asinus_asinus
ENSFALG00000004633	-	88	80.297	ENSECAG00000004638	-	91	77.320	Equus_caballus
ENSFALG00000004633	-	93	79.930	ENSECAG00000003934	-	85	78.840	Equus_caballus
ENSFALG00000004633	-	91	76.619	ENSELUG00000020657	rnf113a	86	76.619	Esox_lucius
ENSFALG00000004633	-	93	79.577	ENSFCAG00000024392	-	79	80.935	Felis_catus
ENSFALG00000004633	-	92	79.359	ENSFCAG00000028962	-	81	80.576	Felis_catus
ENSFALG00000004633	-	93	79.930	ENSFCAG00000025700	-	81	81.295	Felis_catus
ENSFALG00000004633	-	92	76.241	ENSFHEG00000023305	rnf113a	86	77.061	Fundulus_heteroclitus
ENSFALG00000004633	-	95	73.913	ENSGMOG00000004541	rnf113a	86	76.042	Gadus_morhua
ENSFALG00000004633	-	96	91.186	ENSGALG00000000538	RNF113A	87	92.424	Gallus_gallus
ENSFALG00000004633	-	95	75.172	ENSGAFG00000011863	rnf113a	84	77.818	Gambusia_affinis
ENSFALG00000004633	-	95	72.635	ENSGACG00000009738	rnf113a	85	75.445	Gasterosteus_aculeatus
ENSFALG00000004633	-	96	85.223	ENSGAGG00000020490	-	86	86.691	Gopherus_agassizii
ENSFALG00000004633	-	96	78.378	ENSGGOG00000002324	RNF113A	83	80.919	Gorilla_gorilla
ENSFALG00000004633	-	92	65.480	ENSGGOG00000023052	RNF113B	83	66.304	Gorilla_gorilla
ENSFALG00000004633	-	94	77.241	ENSHBUG00000008626	rnf113a	89	77.241	Haplochromis_burtoni
ENSFALG00000004633	-	96	78.231	ENSHGLG00000019571	-	82	80.714	Heterocephalus_glaber_female
ENSFALG00000004633	-	96	76.333	ENSHGLG00100019582	-	82	79.021	Heterocephalus_glaber_male
ENSFALG00000004633	-	95	74.828	ENSHCOG00000003421	rnf113a	85	76.619	Hippocampus_comes
ENSFALG00000004633	-	93	76.491	ENSIPUG00000013431	RNF113A	84	79.197	Ictalurus_punctatus
ENSFALG00000004633	-	94	78.819	ENSSTOG00000019866	-	82	80.071	Ictidomys_tridecemlineatus
ENSFALG00000004633	-	67	66.341	ENSJJAG00000019849	Rnf113a1	94	57.576	Jaculus_jaculus
ENSFALG00000004633	-	95	75.433	ENSKMAG00000009830	rnf113a	86	78.495	Kryptolebias_marmoratus
ENSFALG00000004633	-	92	78.648	ENSLBEG00000004627	rnf113a	86	78.777	Labrus_bergylta
ENSFALG00000004633	-	95	78.966	ENSLACG00000013178	rnf113a	85	82.014	Latimeria_chalumnae
ENSFALG00000004633	-	93	78.014	ENSLOCG00000011785	rnf113a	85	78.261	Lepisosteus_oculatus
ENSFALG00000004633	-	93	79.078	ENSLAFG00000013906	-	85	78.351	Loxodonta_africana
ENSFALG00000004633	-	93	79.720	ENSMFAG00000018472	RNF113A	81	81.295	Macaca_fascicularis
ENSFALG00000004633	-	93	79.720	ENSMMUG00000020223	RNF113A	81	81.295	Macaca_mulatta
ENSFALG00000004633	-	93	79.720	ENSMNEG00000019778	RNF113A	81	81.295	Macaca_nemestrina
ENSFALG00000004633	-	79	72.917	ENSMLEG00000038757	RNF113B	78	74.459	Mandrillus_leucophaeus
ENSFALG00000004633	-	93	79.720	ENSMLEG00000020750	RNF113A	81	81.295	Mandrillus_leucophaeus
ENSFALG00000004633	-	95	75.433	ENSMAMG00000021895	rnf113a	86	78.058	Mastacembelus_armatus
ENSFALG00000004633	-	94	77.586	ENSMZEG00005023086	rnf113a	89	77.586	Maylandia_zebra
ENSFALG00000004633	-	95	91.156	ENSMGAG00000001753	-	94	93.863	Meleagris_gallopavo
ENSFALG00000004633	-	89	77.941	ENSMICG00000038084	-	82	77.936	Microcebus_murinus
ENSFALG00000004633	-	94	77.241	ENSMICG00000001750	-	81	79.715	Microcebus_murinus
ENSFALG00000004633	-	92	78.648	ENSMOCG00000005370	-	79	79.710	Microtus_ochrogaster
ENSFALG00000004633	-	95	73.264	ENSMMOG00000016954	rnf113a	86	75.540	Mola_mola
ENSFALG00000004633	-	95	69.204	ENSMALG00000007938	rnf113a	84	71.377	Monopterus_albus
ENSFALG00000004633	-	89	79.853	MGP_CAROLIEiJ_G0017943	Rnf113a2	82	79.422	Mus_caroli
ENSFALG00000004633	-	89	79.853	ENSMUSG00000098134	Rnf113a2	82	79.422	Mus_musculus
ENSFALG00000004633	-	92	79.643	ENSMUSG00000036537	Rnf113a1	81	81.091	Mus_musculus
ENSFALG00000004633	-	89	80.220	MGP_PahariEiJ_G0029702	Rnf113a2	82	79.783	Mus_pahari
ENSFALG00000004633	-	93	78.521	MGP_PahariEiJ_G0031547	Rnf113a1	81	79.710	Mus_pahari
ENSFALG00000004633	-	89	79.853	MGP_SPRETEiJ_G0018788	Rnf113a2	82	79.422	Mus_spretus
ENSFALG00000004633	-	92	79.643	MGP_SPRETEiJ_G0034156	Rnf113a1	81	81.091	Mus_spretus
ENSFALG00000004633	-	93	78.322	ENSMPUG00000019358	-	85	77.627	Mustela_putorius_furo
ENSFALG00000004633	-	93	78.472	ENSMLUG00000016812	-	85	77.365	Myotis_lucifugus
ENSFALG00000004633	-	90	78.417	ENSMLUG00000010856	-	82	79.004	Myotis_lucifugus
ENSFALG00000004633	-	97	75.667	ENSNBRG00000004314	rnf113a	89	77.586	Neolamprologus_brichardi
ENSFALG00000004633	-	96	78.378	ENSNLEG00000018333	RNF113A	83	80.919	Nomascus_leucogenys
ENSFALG00000004633	-	76	73.276	ENSNLEG00000007844	RNF113B	83	65.000	Nomascus_leucogenys
ENSFALG00000004633	-	89	79.856	ENSMEUG00000001855	-	84	80.142	Notamacropus_eugenii
ENSFALG00000004633	-	94	76.897	ENSONIG00000000741	rnf113a	89	76.897	Oreochromis_niloticus
ENSFALG00000004633	-	93	77.305	ENSOANG00000002592	-	84	78.369	Ornithorhynchus_anatinus
ENSFALG00000004633	-	92	78.873	ENSOCUG00000016207	-	81	81.004	Oryctolagus_cuniculus
ENSFALG00000004633	-	95	76.736	ENSORLG00000002442	rnf113a	85	79.710	Oryzias_latipes
ENSFALG00000004633	-	95	77.083	ENSORLG00020011512	rnf113a	85	80.072	Oryzias_latipes_hni
ENSFALG00000004633	-	95	76.736	ENSORLG00015004382	rnf113a	85	79.710	Oryzias_latipes_hsok
ENSFALG00000004633	-	91	80.435	ENSOMEG00000020197	rnf113a	85	80.435	Oryzias_melastigma
ENSFALG00000004633	-	96	76.871	ENSOGAG00000011638	RNF113B	82	79.359	Otolemur_garnettii
ENSFALG00000004633	-	93	79.298	ENSOGAG00000031602	RNF113A	81	81.786	Otolemur_garnettii
ENSFALG00000004633	-	94	73.171	ENSOARG00000015294	-	82	73.077	Ovis_aries
ENSFALG00000004633	-	93	79.298	ENSOARG00000009771	-	81	81.362	Ovis_aries
ENSFALG00000004633	-	96	78.378	ENSPPAG00000009537	RNF113A	83	80.919	Pan_paniscus
ENSFALG00000004633	-	92	65.836	ENSPPAG00000040641	RNF113B	83	66.667	Pan_paniscus
ENSFALG00000004633	-	93	79.930	ENSPPRG00000011512	-	81	81.295	Panthera_pardus
ENSFALG00000004633	-	92	79.359	ENSPPRG00000020640	-	81	80.935	Panthera_pardus
ENSFALG00000004633	-	93	79.930	ENSPTIG00000007986	-	81	81.295	Panthera_tigris_altaica
ENSFALG00000004633	-	96	78.378	ENSPTRG00000022231	RNF113A	83	80.919	Pan_troglodytes
ENSFALG00000004633	-	92	65.836	ENSPTRG00000005987	RNF113B	83	66.667	Pan_troglodytes
ENSFALG00000004633	-	93	79.720	ENSPANG00000011522	RNF113A	81	81.295	Papio_anubis
ENSFALG00000004633	-	95	77.083	ENSPKIG00000016796	rnf113a	86	80.216	Paramormyrops_kingsleyae
ENSFALG00000004633	-	95	87.197	ENSPSIG00000012676	-	95	88.406	Pelodiscus_sinensis
ENSFALG00000004633	-	95	75.172	ENSPMGG00000009668	rnf113a	85	77.899	Periophthalmus_magnuspinnatus
ENSFALG00000004633	-	93	79.152	ENSPEMG00000002490	Rnf113a1	81	80.866	Peromyscus_maniculatus_bairdii
ENSFALG00000004633	-	90	74.545	ENSPMAG00000005184	rnf113a	93	74.545	Petromyzon_marinus
ENSFALG00000004633	-	90	80.714	ENSPCIG00000028916	-	81	79.649	Phascolarctos_cinereus
ENSFALG00000004633	-	95	73.793	ENSPFOG00000014248	rnf113a	84	77.978	Poecilia_formosa
ENSFALG00000004633	-	93	75.265	ENSPLAG00000010435	rnf113a	84	77.978	Poecilia_latipinna
ENSFALG00000004633	-	95	75.172	ENSPMEG00000010641	rnf113a	84	78.545	Poecilia_mexicana
ENSFALG00000004633	-	95	75.517	ENSPREG00000009900	rnf113a	84	78.545	Poecilia_reticulata
ENSFALG00000004633	-	75	76.419	ENSPPYG00000005460	RNF113B	84	69.065	Pongo_abelii
ENSFALG00000004633	-	96	78.041	ENSPPYG00000020676	RNF113A	83	80.919	Pongo_abelii
ENSFALG00000004633	-	93	78.723	ENSPCAG00000014633	-	81	81.159	Procavia_capensis
ENSFALG00000004633	-	92	73.793	ENSPCOG00000005671	-	80	76.786	Propithecus_coquereli
ENSFALG00000004633	-	94	77.586	ENSPNYG00000013863	rnf113a	89	77.586	Pundamilia_nyererei
ENSFALG00000004633	-	93	76.761	ENSPNAG00000017428	rnf113a	85	79.348	Pygocentrus_nattereri
ENSFALG00000004633	-	92	80.783	ENSRNOG00000034040	LOC108348079	81	82.182	Rattus_norvegicus
ENSFALG00000004633	-	92	80.783	ENSRNOG00000059412	Rnf113a1	81	82.182	Rattus_norvegicus
ENSFALG00000004633	-	77	72.961	ENSRBIG00000036094	RNF113B	83	65.580	Rhinopithecus_bieti
ENSFALG00000004633	-	96	78.041	ENSRBIG00000017389	RNF113A	81	81.295	Rhinopithecus_bieti
ENSFALG00000004633	-	77	72.961	ENSRROG00000045661	RNF113B	83	65.580	Rhinopithecus_roxellana
ENSFALG00000004633	-	96	78.041	ENSRROG00000012149	RNF113A	81	81.295	Rhinopithecus_roxellana
ENSFALG00000004633	-	94	78.472	ENSSBOG00000017704	RNF113A	81	80.645	Saimiri_boliviensis_boliviensis
ENSFALG00000004633	-	76	75.862	ENSSBOG00000029719	RNF113B	83	67.986	Saimiri_boliviensis_boliviensis
ENSFALG00000004633	-	90	79.715	ENSSHAG00000008839	-	81	79.720	Sarcophilus_harrisii
ENSFALG00000004633	-	95	77.083	ENSSFOG00015016567	rnf113a	84	78.986	Scleropages_formosus
ENSFALG00000004633	-	92	77.224	ENSSMAG00000009235	rnf113a	85	78.545	Scophthalmus_maximus
ENSFALG00000004633	-	95	74.740	ENSSDUG00000022244	rnf113a	85	77.899	Seriola_dumerili
ENSFALG00000004633	-	95	74.740	ENSSLDG00000018582	rnf113a	85	77.899	Seriola_lalandi_dorsalis
ENSFALG00000004633	-	93	79.225	ENSSARG00000010436	-	83	80.351	Sorex_araneus
ENSFALG00000004633	-	92	87.857	ENSSPUG00000018786	-	77	88.406	Sphenodon_punctatus
ENSFALG00000004633	-	95	76.125	ENSSPAG00000013187	rnf113a	85	79.348	Stegastes_partitus
ENSFALG00000004633	-	92	77.113	ENSSSCG00000032973	-	81	79.643	Sus_scrofa
ENSFALG00000004633	-	96	95.548	ENSTGUG00000001947	-	85	97.122	Taeniopygia_guttata
ENSFALG00000004633	-	91	75.090	ENSTRUG00000011142	rnf113a	85	75.451	Takifugu_rubripes
ENSFALG00000004633	-	89	77.289	ENSTNIG00000014938	rnf113a	85	76.259	Tetraodon_nigroviridis
ENSFALG00000004633	-	94	77.778	ENSTBEG00000012687	-	82	80.714	Tupaia_belangeri
ENSFALG00000004633	-	92	80.357	ENSUAMG00000024564	-	82	81.655	Ursus_americanus
ENSFALG00000004633	-	93	80.212	ENSUMAG00000002167	-	84	81.655	Ursus_maritimus
ENSFALG00000004633	-	98	73.754	ENSVPAG00000004521	-	92	75.694	Vicugna_pacos
ENSFALG00000004633	-	93	78.125	ENSVVUG00000011662	-	81	80.565	Vulpes_vulpes
ENSFALG00000004633	-	63	68.586	ENSVVUG00000004522	-	70	66.184	Vulpes_vulpes
ENSFALG00000004633	-	92	79.433	ENSXETG00000002042	rnf113a	87	79.928	Xenopus_tropicalis
ENSFALG00000004633	-	90	77.455	ENSXCOG00000017542	rnf113a	87	77.455	Xiphophorus_couchianus
ENSFALG00000004633	-	95	75.517	ENSXMAG00000008169	rnf113a	84	78.545	Xiphophorus_maculatus