EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004636 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 44861 bases
Position: chrJH603336.1:608645-653505
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004847	Npa1	PF11707.8	1e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004871	URB1-201	6972	-	ENSFALP00000004847	2229 (aa)	-	U3JPZ3

Gene Model

Click here to download ENSFALG00000004636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004636	URB1	99	51.375	ENSG00000142207	URB1	98	51.394	Homo_sapiens
ENSFALG00000004636	URB1	92	49.643	ENSAPOG00000020308	urb1	93	49.643	Acanthochromis_polyacanthus
ENSFALG00000004636	URB1	99	50.597	ENSAMEG00000011998	URB1	97	50.817	Ailuropoda_melanoleuca
ENSFALG00000004636	URB1	90	47.746	ENSACIG00000003248	urb1	91	47.746	Amphilophus_citrinellus
ENSFALG00000004636	URB1	98	41.992	ENSAOCG00000010364	urb1	96	42.127	Amphiprion_ocellaris
ENSFALG00000004636	URB1	98	42.328	ENSAPEG00000010758	urb1	97	42.347	Amphiprion_percula
ENSFALG00000004636	URB1	99	42.168	ENSATEG00000011790	urb1	96	42.219	Anabas_testudineus
ENSFALG00000004636	URB1	98	69.317	ENSAPLG00000012791	URB1	99	69.497	Anas_platyrhynchos
ENSFALG00000004636	URB1	99	55.442	ENSACAG00000002817	URB1	97	55.423	Anolis_carolinensis
ENSFALG00000004636	URB1	99	51.977	ENSANAG00000024617	URB1	98	51.858	Aotus_nancymaae
ENSFALG00000004636	URB1	98	42.927	ENSACLG00000024865	urb1	97	42.883	Astatotilapia_calliptera
ENSFALG00000004636	URB1	98	38.410	ENSAMXG00000012306	urb1	98	38.182	Astyanax_mexicanus
ENSFALG00000004636	URB1	99	50.617	ENSBTAG00000012412	URB1	98	50.749	Bos_taurus
ENSFALG00000004636	URB1	99	51.443	ENSCJAG00000009118	URB1	98	51.392	Callithrix_jacchus
ENSFALG00000004636	URB1	99	51.717	ENSCAFG00000008892	URB1	98	51.849	Canis_familiaris
ENSFALG00000004636	URB1	99	50.751	ENSCAFG00020025994	-	98	50.883	Canis_lupus_dingo
ENSFALG00000004636	URB1	99	51.458	ENSCAFG00020025987	-	98	51.590	Canis_lupus_dingo
ENSFALG00000004636	URB1	99	50.637	ENSCHIG00000015645	URB1	98	50.725	Capra_hircus
ENSFALG00000004636	URB1	99	52.736	ENSTSYG00000013286	URB1	98	52.387	Carlito_syrichta
ENSFALG00000004636	URB1	99	49.358	ENSCAPG00000015589	URB1	99	49.336	Cavia_aperea
ENSFALG00000004636	URB1	99	50.774	ENSCPOG00000006748	URB1	98	50.752	Cavia_porcellus
ENSFALG00000004636	URB1	99	51.440	ENSCCAG00000021299	URB1	98	51.506	Cebus_capucinus
ENSFALG00000004636	URB1	99	52.147	ENSCATG00000042630	URB1	98	52.212	Cercocebus_atys
ENSFALG00000004636	URB1	99	51.282	ENSCLAG00000005262	URB1	98	51.123	Chinchilla_lanigera
ENSFALG00000004636	URB1	99	51.126	ENSCSAG00000009584	URB1	98	51.256	Chlorocebus_sabaeus
ENSFALG00000004636	URB1	99	62.749	ENSCPBG00000006454	URB1	98	62.927	Chrysemys_picta_bellii
ENSFALG00000004636	URB1	99	52.085	ENSCANG00000031088	URB1	98	52.168	Colobus_angolensis_palliatus
ENSFALG00000004636	URB1	99	50.752	ENSCGRG00001010616	Urb1	98	50.664	Cricetulus_griseus_chok1gshd
ENSFALG00000004636	URB1	99	50.619	ENSCGRG00000015840	Urb1	99	50.531	Cricetulus_griseus_crigri
ENSFALG00000004636	URB1	99	41.470	ENSCSEG00000012616	urb1	94	45.469	Cynoglossus_semilaevis
ENSFALG00000004636	URB1	95	42.541	ENSCVAG00000009076	urb1	87	55.066	Cyprinodon_variegatus
ENSFALG00000004636	URB1	96	61.719	ENSDARG00000060308	urb1	97	62.205	Danio_rerio
ENSFALG00000004636	URB1	84	53.806	ENSDNOG00000015586	URB1	97	53.762	Dasypus_novemcinctus
ENSFALG00000004636	URB1	99	50.705	ENSDORG00000006735	Urb1	98	50.661	Dipodomys_ordii
ENSFALG00000004636	URB1	90	63.508	ENSETEG00000009080	URB1	89	63.508	Echinops_telfairi
ENSFALG00000004636	URB1	99	51.107	ENSEASG00005007711	URB1	96	53.349	Equus_asinus_asinus
ENSFALG00000004636	URB1	95	65.233	ENSECAG00000013206	URB1	98	51.543	Equus_caballus
ENSFALG00000004636	URB1	99	43.371	ENSELUG00000020516	urb1	94	52.252	Esox_lucius
ENSFALG00000004636	URB1	99	51.857	ENSFCAG00000002177	URB1	98	51.790	Felis_catus
ENSFALG00000004636	URB1	99	50.617	ENSFDAG00000007288	URB1	93	50.374	Fukomys_damarensis
ENSFALG00000004636	URB1	98	39.532	ENSFHEG00000000202	urb1	99	40.030	Fundulus_heteroclitus
ENSFALG00000004636	URB1	93	46.438	ENSGMOG00000001838	urb1	92	46.567	Gadus_morhua
ENSFALG00000004636	URB1	99	69.105	ENSGALG00000015887	URB1	98	69.125	Gallus_gallus
ENSFALG00000004636	URB1	99	40.873	ENSGAFG00000020694	urb1	97	40.873	Gambusia_affinis
ENSFALG00000004636	URB1	99	43.278	ENSGACG00000011703	urb1	99	43.329	Gasterosteus_aculeatus
ENSFALG00000004636	URB1	99	62.012	ENSGAGG00000022544	URB1	98	62.012	Gopherus_agassizii
ENSFALG00000004636	URB1	99	51.375	ENSGGOG00000000285	URB1	98	51.394	Gorilla_gorilla
ENSFALG00000004636	URB1	98	43.086	ENSHBUG00000001904	urb1	97	42.946	Haplochromis_burtoni
ENSFALG00000004636	URB1	99	50.131	ENSHGLG00000004907	URB1	98	49.935	Heterocephalus_glaber_female
ENSFALG00000004636	URB1	99	50.442	ENSHGLG00100010749	URB1	98	50.265	Heterocephalus_glaber_male
ENSFALG00000004636	URB1	69	54.979	ENSHCOG00000018683	urb1	95	55.394	Hippocampus_comes
ENSFALG00000004636	URB1	99	38.384	ENSIPUG00000014721	urb1	98	38.238	Ictalurus_punctatus
ENSFALG00000004636	URB1	99	51.259	ENSSTOG00000004539	URB1	98	51.214	Ictidomys_tridecemlineatus
ENSFALG00000004636	URB1	94	45.997	ENSKMAG00000006001	urb1	98	46.910	Kryptolebias_marmoratus
ENSFALG00000004636	URB1	97	41.519	ENSLBEG00000027208	urb1	98	41.477	Labrus_bergylta
ENSFALG00000004636	URB1	99	46.900	ENSLACG00000017059	URB1	98	46.900	Latimeria_chalumnae
ENSFALG00000004636	URB1	99	43.301	ENSLOCG00000009190	urb1	98	43.427	Lepisosteus_oculatus
ENSFALG00000004636	URB1	99	51.408	ENSLAFG00000010407	URB1	98	51.299	Loxodonta_africana
ENSFALG00000004636	URB1	99	51.723	ENSMFAG00000034391	URB1	94	51.968	Macaca_fascicularis
ENSFALG00000004636	URB1	94	56.727	ENSMMUG00000010295	URB1	94	57.177	Macaca_mulatta
ENSFALG00000004636	URB1	99	50.842	ENSMNEG00000032981	URB1	98	50.907	Macaca_nemestrina
ENSFALG00000004636	URB1	99	51.863	ENSMLEG00000041435	URB1	98	51.903	Mandrillus_leucophaeus
ENSFALG00000004636	URB1	99	41.541	ENSMAMG00000011238	urb1	97	41.541	Mastacembelus_armatus
ENSFALG00000004636	URB1	98	40.442	ENSMZEG00005011862	urb1	97	40.391	Maylandia_zebra
ENSFALG00000004636	URB1	99	68.822	ENSMGAG00000014512	URB1	99	68.999	Meleagris_gallopavo
ENSFALG00000004636	URB1	98	61.146	ENSMAUG00000010516	Urb1	97	61.146	Mesocricetus_auratus
ENSFALG00000004636	URB1	99	51.506	ENSMICG00000016424	URB1	98	51.307	Microcebus_murinus
ENSFALG00000004636	URB1	99	49.204	ENSMOCG00000012613	Urb1	98	49.138	Microtus_ochrogaster
ENSFALG00000004636	URB1	99	51.617	ENSMODG00000021076	URB1	98	51.441	Monodelphis_domestica
ENSFALG00000004636	URB1	96	42.494	ENSMALG00000017411	urb1	95	42.494	Monopterus_albus
ENSFALG00000004636	URB1	99	50.330	MGP_CAROLIEiJ_G0020948	Urb1	97	50.243	Mus_caroli
ENSFALG00000004636	URB1	99	50.154	ENSMUSG00000039929	Urb1	97	49.934	Mus_musculus
ENSFALG00000004636	URB1	99	50.417	MGP_PahariEiJ_G0016653	Urb1	97	50.572	Mus_pahari
ENSFALG00000004636	URB1	99	50.110	MGP_SPRETEiJ_G0021854	Urb1	97	49.890	Mus_spretus
ENSFALG00000004636	URB1	99	51.590	ENSMPUG00000001123	URB1	98	51.592	Mustela_putorius_furo
ENSFALG00000004636	URB1	99	49.093	ENSNGAG00000001905	Urb1	98	48.960	Nannospalax_galili
ENSFALG00000004636	URB1	81	45.138	ENSNBRG00000001049	urb1	97	44.806	Neolamprologus_brichardi
ENSFALG00000004636	URB1	99	50.912	ENSNLEG00000026872	URB1	98	50.752	Nomascus_leucogenys
ENSFALG00000004636	URB1	92	59.375	ENSMEUG00000010828	URB1	91	59.091	Notamacropus_eugenii
ENSFALG00000004636	URB1	99	48.851	ENSOPRG00000013482	URB1	98	48.613	Ochotona_princeps
ENSFALG00000004636	URB1	99	50.686	ENSODEG00000002587	URB1	97	50.442	Octodon_degus
ENSFALG00000004636	URB1	99	42.857	ENSONIG00000005599	urb1	98	42.851	Oreochromis_niloticus
ENSFALG00000004636	URB1	99	51.571	ENSOCUG00000009381	URB1	97	51.500	Oryctolagus_cuniculus
ENSFALG00000004636	URB1	99	41.221	ENSORLG00000003429	urb1	98	41.327	Oryzias_latipes
ENSFALG00000004636	URB1	99	41.247	ENSORLG00020013785	urb1	99	40.650	Oryzias_latipes_hni
ENSFALG00000004636	URB1	99	40.328	ENSORLG00015019421	urb1	96	51.026	Oryzias_latipes_hsok
ENSFALG00000004636	URB1	69	55.000	ENSOMEG00000002094	urb1	93	55.000	Oryzias_melastigma
ENSFALG00000004636	URB1	99	51.770	ENSOGAG00000017140	URB1	98	51.683	Otolemur_garnettii
ENSFALG00000004636	URB1	96	55.983	ENSOARG00000013679	URB1	98	55.983	Ovis_aries
ENSFALG00000004636	URB1	99	51.619	ENSPPAG00000003423	URB1	98	51.637	Pan_paniscus
ENSFALG00000004636	URB1	99	51.876	ENSPPRG00000023131	URB1	98	51.988	Panthera_pardus
ENSFALG00000004636	URB1	92	52.122	ENSPTIG00000016125	URB1	96	52.174	Panthera_tigris_altaica
ENSFALG00000004636	URB1	99	51.551	ENSPTRG00000013852	URB1	98	51.570	Pan_troglodytes
ENSFALG00000004636	URB1	99	51.952	ENSPANG00000021964	URB1	98	52.035	Papio_anubis
ENSFALG00000004636	URB1	99	42.655	ENSPKIG00000003683	urb1	97	42.731	Paramormyrops_kingsleyae
ENSFALG00000004636	URB1	99	50.510	ENSPEMG00000021205	Urb1	97	50.510	Peromyscus_maniculatus_bairdii
ENSFALG00000004636	URB1	74	38.625	ENSPMAG00000009733	URB1	99	32.223	Petromyzon_marinus
ENSFALG00000004636	URB1	99	52.099	ENSPCIG00000016350	URB1	98	52.184	Phascolarctos_cinereus
ENSFALG00000004636	URB1	98	41.174	ENSPLAG00000004371	urb1	99	41.046	Poecilia_latipinna
ENSFALG00000004636	URB1	99	41.685	ENSPMEG00000006634	urb1	98	41.506	Poecilia_mexicana
ENSFALG00000004636	URB1	98	42.253	ENSPREG00000013453	urb1	97	42.164	Poecilia_reticulata
ENSFALG00000004636	URB1	99	51.306	ENSPPYG00000011359	URB1	98	51.394	Pongo_abelii
ENSFALG00000004636	URB1	99	45.174	ENSPCAG00000007430	URB1	91	58.084	Procavia_capensis
ENSFALG00000004636	URB1	99	52.396	ENSPCOG00000022695	URB1	98	52.259	Propithecus_coquereli
ENSFALG00000004636	URB1	99	50.707	ENSPVAG00000000889	URB1	98	50.750	Pteropus_vampyrus
ENSFALG00000004636	URB1	98	42.518	ENSPNYG00000010589	urb1	98	42.154	Pundamilia_nyererei
ENSFALG00000004636	URB1	99	39.281	ENSPNAG00000019324	urb1	98	39.385	Pygocentrus_nattereri
ENSFALG00000004636	URB1	99	49.692	ENSRNOG00000002080	Urb1	97	49.779	Rattus_norvegicus
ENSFALG00000004636	URB1	99	51.819	ENSRBIG00000033122	URB1	98	51.903	Rhinopithecus_bieti
ENSFALG00000004636	URB1	99	51.819	ENSRROG00000040237	URB1	98	51.903	Rhinopithecus_roxellana
ENSFALG00000004636	URB1	99	51.557	ENSSBOG00000027672	URB1	98	51.393	Saimiri_boliviensis_boliviensis
ENSFALG00000004636	URB1	99	51.426	ENSSHAG00000005140	URB1	98	51.230	Sarcophilus_harrisii
ENSFALG00000004636	URB1	92	43.685	ENSSFOG00015000339	urb1	97	43.753	Scleropages_formosus
ENSFALG00000004636	URB1	98	43.845	ENSSMAG00000003782	urb1	98	43.172	Scophthalmus_maximus
ENSFALG00000004636	URB1	99	43.385	ENSSDUG00000012313	urb1	98	43.430	Seriola_dumerili
ENSFALG00000004636	URB1	99	43.234	ENSSLDG00000023179	urb1	98	43.190	Seriola_lalandi_dorsalis
ENSFALG00000004636	URB1	99	58.488	ENSSPUG00000012447	URB1	98	58.547	Sphenodon_punctatus
ENSFALG00000004636	URB1	98	43.218	ENSSPAG00000006325	urb1	97	43.174	Stegastes_partitus
ENSFALG00000004636	URB1	99	51.794	ENSSSCG00000032024	URB1	98	51.835	Sus_scrofa
ENSFALG00000004636	URB1	75	75.426	ENSTGUG00000013442	URB1	100	75.426	Taeniopygia_guttata
ENSFALG00000004636	URB1	98	42.275	ENSTRUG00000009372	urb1	97	42.390	Takifugu_rubripes
ENSFALG00000004636	URB1	98	42.504	ENSTNIG00000016277	urb1	98	42.408	Tetraodon_nigroviridis
ENSFALG00000004636	URB1	76	61.043	ENSTBEG00000010044	URB1	74	61.043	Tupaia_belangeri
ENSFALG00000004636	URB1	90	59.670	ENSTTRG00000007712	URB1	89	59.670	Tursiops_truncatus
ENSFALG00000004636	URB1	99	50.861	ENSUAMG00000012231	URB1	97	50.706	Ursus_americanus
ENSFALG00000004636	URB1	87	64.320	ENSUMAG00000017419	URB1	98	50.879	Ursus_maritimus
ENSFALG00000004636	URB1	66	71.918	ENSVPAG00000001164	URB1	64	71.918	Vicugna_pacos
ENSFALG00000004636	URB1	95	65.595	ENSVVUG00000000551	URB1	94	65.595	Vulpes_vulpes
ENSFALG00000004636	URB1	99	50.307	ENSXETG00000009895	urb1	98	50.395	Xenopus_tropicalis
ENSFALG00000004636	URB1	96	42.397	ENSXCOG00000005500	urb1	97	42.397	Xiphophorus_couchianus
ENSFALG00000004636	URB1	99	40.422	ENSXMAG00000007253	urb1	96	43.252	Xiphophorus_maculatus