EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004675 (Gene tree)
Gene ID: -
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 14106 bases
Position: chrJH603404.1:380569-394674
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004865	ResIII	PF04851.15	4.9e-07	1	1
ENSFALP00000004865	DEAD	PF00270.29	6.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004889	DDX42-201	4600	-	ENSFALP00000004865	1125 (aa)	-	U3JQ11

Gene Model

Click here to download ENSFALG00000004675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004675's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004675	DDX42	72	88.609	ENSG00000198231	DDX42	97	93.750	Homo_sapiens
ENSFALG00000004675	DDX42	73	76.196	ENSAPOG00000017675	ddx42	99	70.753	Acanthochromis_polyacanthus
ENSFALG00000004675	DDX42	72	89.316	ENSAMEG00000003200	DDX42	94	85.570	Ailuropoda_melanoleuca
ENSFALG00000004675	DDX42	61	77.135	ENSACIG00000007376	ddx42	98	69.949	Amphilophus_citrinellus
ENSFALG00000004675	DDX42	83	70.501	ENSAOCG00000003520	ddx42	98	69.989	Amphiprion_ocellaris
ENSFALG00000004675	DDX42	83	69.755	ENSAPEG00000000984	ddx42	98	70.244	Amphiprion_percula
ENSFALG00000004675	DDX42	73	76.784	ENSATEG00000022920	ddx42	97	72.891	Anabas_testudineus
ENSFALG00000004675	DDX42	78	93.396	ENSAPLG00000010544	DDX42	96	88.962	Anas_platyrhynchos
ENSFALG00000004675	DDX42	80	82.314	ENSACAG00000003994	DDX42	97	82.751	Anolis_carolinensis
ENSFALG00000004675	DDX42	78	85.666	ENSANAG00000035693	DDX42	98	90.100	Aotus_nancymaae
ENSFALG00000004675	DDX42	74	76.407	ENSACLG00000025113	ddx42	98	71.913	Astatotilapia_calliptera
ENSFALG00000004675	DDX42	66	81.009	ENSAMXG00000011435	ddx42	89	75.000	Astyanax_mexicanus
ENSFALG00000004675	DDX42	74	88.138	ENSBTAG00000021058	DDX42	98	89.031	Bos_taurus
ENSFALG00000004675	DDX42	53	52.987	WBGene00008119	C46F11.4	78	53.052	Caenorhabditis_elegans
ENSFALG00000004675	DDX42	74	88.717	ENSCJAG00000019649	DDX42	99	93.126	Callithrix_jacchus
ENSFALG00000004675	DDX42	72	90.366	ENSCAFG00000012818	DDX42	94	84.521	Canis_familiaris
ENSFALG00000004675	DDX42	72	90.488	ENSCAFG00020026631	DDX42	94	84.633	Canis_lupus_dingo
ENSFALG00000004675	DDX42	74	89.021	ENSCHIG00000014431	DDX42	93	88.159	Capra_hircus
ENSFALG00000004675	DDX42	72	90.268	ENSTSYG00000001380	DDX42	94	85.586	Carlito_syrichta
ENSFALG00000004675	DDX42	59	69.424	ENSCAPG00000013621	DDX42	94	69.424	Cavia_aperea
ENSFALG00000004675	DDX42	72	89.769	ENSCPOG00000005633	DDX42	95	85.039	Cavia_porcellus
ENSFALG00000004675	DDX42	74	83.472	ENSCCAG00000020612	DDX42	97	90.374	Cebus_capucinus
ENSFALG00000004675	DDX42	74	88.466	ENSCATG00000030490	DDX42	97	85.175	Cercocebus_atys
ENSFALG00000004675	DDX42	77	85.941	ENSCLAG00000003497	DDX42	94	85.941	Chinchilla_lanigera
ENSFALG00000004675	DDX42	72	84.487	ENSCSAG00000003914	DDX42	94	81.278	Chlorocebus_sabaeus
ENSFALG00000004675	DDX42	51	94.643	ENSCHOG00000006241	DDX42	62	94.643	Choloepus_hoffmanni
ENSFALG00000004675	DDX42	89	82.581	ENSCPBG00000026682	DDX42	96	83.843	Chrysemys_picta_bellii
ENSFALG00000004675	DDX42	74	88.347	ENSCANG00000034663	DDX42	98	90.580	Colobus_angolensis_palliatus
ENSFALG00000004675	DDX42	72	90.134	ENSCGRG00001009775	Ddx42	96	84.804	Cricetulus_griseus_chok1gshd
ENSFALG00000004675	DDX42	72	90.134	ENSCGRG00000011718	Ddx42	96	84.804	Cricetulus_griseus_crigri
ENSFALG00000004675	DDX42	79	70.045	ENSCSEG00000021574	ddx42	86	77.806	Cynoglossus_semilaevis
ENSFALG00000004675	DDX42	72	76.420	ENSCVAG00000011404	ddx42	98	68.177	Cyprinodon_variegatus
ENSFALG00000004675	DDX42	66	81.333	ENSDARG00000037928	ddx42	90	76.428	Danio_rerio
ENSFALG00000004675	DDX42	72	86.536	ENSDNOG00000007961	DDX42	96	80.310	Dasypus_novemcinctus
ENSFALG00000004675	DDX42	78	78.027	ENSDORG00000004199	Ddx42	94	77.915	Dipodomys_ordii
ENSFALG00000004675	DDX42	54	61.798	FBgn0036104	CG6418	91	56.540	Drosophila_melanogaster
ENSFALG00000004675	DDX42	67	72.069	ENSEBUG00000001155	ddx42	92	72.069	Eptatretus_burgeri
ENSFALG00000004675	DDX42	72	90.256	ENSEASG00005013089	DDX42	99	90.374	Equus_asinus_asinus
ENSFALG00000004675	DDX42	72	90.256	ENSECAG00000022684	DDX42	94	84.538	Equus_caballus
ENSFALG00000004675	DDX42	73	75.180	ENSELUG00000020593	ddx42	89	75.300	Esox_lucius
ENSFALG00000004675	DDX42	72	90.378	ENSFCAG00000003499	DDX42	94	84.650	Felis_catus
ENSFALG00000004675	DDX42	75	87.413	ENSFDAG00000020516	DDX42	90	88.955	Fukomys_damarensis
ENSFALG00000004675	DDX42	72	75.892	ENSFHEG00000023290	ddx42	97	70.907	Fundulus_heteroclitus
ENSFALG00000004675	DDX42	63	77.010	ENSGMOG00000004595	ddx42	79	76.587	Gadus_morhua
ENSFALG00000004675	DDX42	80	92.462	ENSGALG00000000581	DDX42	90	92.462	Gallus_gallus
ENSFALG00000004675	DDX42	74	75.149	ENSGAFG00000011846	ddx42	96	72.284	Gambusia_affinis
ENSFALG00000004675	DDX42	73	72.242	ENSGACG00000009782	ddx42	94	71.223	Gasterosteus_aculeatus
ENSFALG00000004675	DDX42	88	82.721	ENSGAGG00000024411	DDX42	95	83.479	Gopherus_agassizii
ENSFALG00000004675	DDX42	74	88.480	ENSGGOG00000006779	DDX42	97	90.086	Gorilla_gorilla
ENSFALG00000004675	DDX42	74	76.647	ENSHBUG00000008705	ddx42	98	72.131	Haplochromis_burtoni
ENSFALG00000004675	DDX42	74	83.610	ENSHGLG00000010024	DDX42	90	83.610	Heterocephalus_glaber_female
ENSFALG00000004675	DDX42	72	65.422	ENSHGLG00100007138	-	94	64.846	Heterocephalus_glaber_male
ENSFALG00000004675	DDX42	72	89.647	ENSHGLG00100004479	-	94	84.572	Heterocephalus_glaber_male
ENSFALG00000004675	DDX42	69	78.553	ENSHCOG00000003357	ddx42	96	75.456	Hippocampus_comes
ENSFALG00000004675	DDX42	66	79.814	ENSIPUG00000013327	ddx42	93	75.689	Ictalurus_punctatus
ENSFALG00000004675	DDX42	74	88.612	ENSSTOG00000008922	DDX42	94	85.504	Ictidomys_tridecemlineatus
ENSFALG00000004675	DDX42	74	89.008	ENSJJAG00000011727	Ddx42	90	89.247	Jaculus_jaculus
ENSFALG00000004675	DDX42	72	76.492	ENSKMAG00000009914	ddx42	92	75.383	Kryptolebias_marmoratus
ENSFALG00000004675	DDX42	68	75.389	ENSLBEG00000004687	ddx42	86	75.000	Labrus_bergylta
ENSFALG00000004675	DDX42	66	86.765	ENSLACG00000013476	DDX42	92	79.439	Latimeria_chalumnae
ENSFALG00000004675	DDX42	80	74.587	ENSLOCG00000011764	ddx42	96	73.885	Lepisosteus_oculatus
ENSFALG00000004675	DDX42	72	90.378	ENSLAFG00000003249	DDX42	93	86.866	Loxodonta_africana
ENSFALG00000004675	DDX42	74	88.347	ENSMFAG00000031356	DDX42	97	85.040	Macaca_fascicularis
ENSFALG00000004675	DDX42	74	88.347	ENSMMUG00000016762	DDX42	96	89.799	Macaca_mulatta
ENSFALG00000004675	DDX42	74	88.347	ENSMNEG00000038250	DDX42	98	85.040	Macaca_nemestrina
ENSFALG00000004675	DDX42	72	88.595	ENSMLEG00000043080	DDX42	97	82.353	Mandrillus_leucophaeus
ENSFALG00000004675	DDX42	74	76.951	ENSMAMG00000021888	ddx42	95	70.968	Mastacembelus_armatus
ENSFALG00000004675	DDX42	74	76.407	ENSMZEG00005023103	ddx42	98	71.913	Maylandia_zebra
ENSFALG00000004675	DDX42	80	92.344	ENSMGAG00000001822	DDX42	90	92.344	Meleagris_gallopavo
ENSFALG00000004675	DDX42	61	90.244	ENSMAUG00000020774	-	93	90.244	Mesocricetus_auratus
ENSFALG00000004675	DDX42	78	85.955	ENSMICG00000009952	DDX42	94	85.955	Microcebus_murinus
ENSFALG00000004675	DDX42	78	84.978	ENSMOCG00000015504	Ddx42	96	84.978	Microtus_ochrogaster
ENSFALG00000004675	DDX42	73	71.807	ENSMMOG00000016963	ddx42	88	70.327	Mola_mola
ENSFALG00000004675	DDX42	73	76.357	ENSMALG00000007800	ddx42	98	71.366	Monopterus_albus
ENSFALG00000004675	DDX42	78	84.305	MGP_CAROLIEiJ_G0017314	Ddx42	96	84.581	Mus_caroli
ENSFALG00000004675	DDX42	78	84.305	ENSMUSG00000020705	Ddx42	96	84.581	Mus_musculus
ENSFALG00000004675	DDX42	60	95.245	MGP_PahariEiJ_G0018444	-	96	95.133	Mus_pahari
ENSFALG00000004675	DDX42	78	84.305	MGP_SPRETEiJ_G0018158	Ddx42	96	84.581	Mus_spretus
ENSFALG00000004675	DDX42	72	90.488	ENSMPUG00000014921	DDX42	94	85.078	Mustela_putorius_furo
ENSFALG00000004675	DDX42	74	89.260	ENSMLUG00000011645	DDX42	94	82.995	Myotis_lucifugus
ENSFALG00000004675	DDX42	77	86.270	ENSNGAG00000021897	Ddx42	97	84.573	Nannospalax_galili
ENSFALG00000004675	DDX42	74	75.210	ENSNBRG00000004466	ddx42	98	70.820	Neolamprologus_brichardi
ENSFALG00000004675	DDX42	74	88.480	ENSNLEG00000004248	DDX42	99	90.086	Nomascus_leucogenys
ENSFALG00000004675	DDX42	52	80.723	ENSMEUG00000013227	-	71	80.723	Notamacropus_eugenii
ENSFALG00000004675	DDX42	73	89.531	ENSOPRG00000014960	DDX42	93	86.286	Ochotona_princeps
ENSFALG00000004675	DDX42	77	82.306	ENSODEG00000007810	DDX42	92	82.494	Octodon_degus
ENSFALG00000004675	DDX42	74	76.527	ENSONIG00000000734	ddx42	98	72.022	Oreochromis_niloticus
ENSFALG00000004675	DDX42	72	90.134	ENSOCUG00000004304	DDX42	87	85.023	Oryctolagus_cuniculus
ENSFALG00000004675	DDX42	72	76.063	ENSORLG00000002395	ddx42	92	73.540	Oryzias_latipes
ENSFALG00000004675	DDX42	72	76.063	ENSORLG00020011621	ddx42	98	72.402	Oryzias_latipes_hni
ENSFALG00000004675	DDX42	66	81.092	ENSORLG00015004487	ddx42	92	75.416	Oryzias_latipes_hsok
ENSFALG00000004675	DDX42	73	76.335	ENSOMEG00000020093	ddx42	97	72.160	Oryzias_melastigma
ENSFALG00000004675	DDX42	72	90.256	ENSOGAG00000006872	DDX42	95	84.141	Otolemur_garnettii
ENSFALG00000004675	DDX42	72	90.036	ENSOARG00000013540	DDX42	90	87.398	Ovis_aries
ENSFALG00000004675	DDX42	74	88.480	ENSPPAG00000007496	DDX42	97	90.014	Pan_paniscus
ENSFALG00000004675	DDX42	72	90.256	ENSPPRG00000002740	DDX42	94	84.538	Panthera_pardus
ENSFALG00000004675	DDX42	72	90.256	ENSPTIG00000009932	DDX42	94	84.427	Panthera_tigris_altaica
ENSFALG00000004675	DDX42	74	88.480	ENSPTRG00000009523	DDX42	97	90.014	Pan_troglodytes
ENSFALG00000004675	DDX42	74	88.228	ENSPANG00000020990	DDX42	92	89.601	Papio_anubis
ENSFALG00000004675	DDX42	66	82.024	ENSPKIG00000002901	ddx42	97	74.112	Paramormyrops_kingsleyae
ENSFALG00000004675	DDX42	70	92.260	ENSPSIG00000010289	DDX42	98	91.985	Pelodiscus_sinensis
ENSFALG00000004675	DDX42	74	72.162	ENSPMGG00000009323	ddx42	98	68.111	Periophthalmus_magnuspinnatus
ENSFALG00000004675	DDX42	72	89.647	ENSPEMG00000006755	Ddx42	96	84.246	Peromyscus_maniculatus_bairdii
ENSFALG00000004675	DDX42	66	72.536	ENSPMAG00000005580	ddx42	100	72.739	Petromyzon_marinus
ENSFALG00000004675	DDX42	77	84.876	ENSPCIG00000009093	DDX42	94	85.198	Phascolarctos_cinereus
ENSFALG00000004675	DDX42	73	76.048	ENSPFOG00000014104	ddx42	94	72.044	Poecilia_formosa
ENSFALG00000004675	DDX42	73	76.048	ENSPLAG00000010522	ddx42	94	72.044	Poecilia_latipinna
ENSFALG00000004675	DDX42	73	76.048	ENSPMEG00000010744	ddx42	93	72.044	Poecilia_mexicana
ENSFALG00000004675	DDX42	73	75.689	ENSPREG00000009926	ddx42	92	71.713	Poecilia_reticulata
ENSFALG00000004675	DDX42	72	86.571	ENSPPYG00000008531	DDX42	94	83.221	Pongo_abelii
ENSFALG00000004675	DDX42	66	84.739	ENSPCAG00000002474	DDX42	89	83.007	Procavia_capensis
ENSFALG00000004675	DDX42	72	79.294	ENSPCOG00000001559	DDX42	98	82.474	Propithecus_coquereli
ENSFALG00000004675	DDX42	74	84.959	ENSPVAG00000000160	DDX42	91	84.959	Pteropus_vampyrus
ENSFALG00000004675	DDX42	61	74.566	ENSPNYG00000013954	ddx42	95	69.650	Pundamilia_nyererei
ENSFALG00000004675	DDX42	64	81.063	ENSPNAG00000017352	ddx42	88	75.754	Pygocentrus_nattereri
ENSFALG00000004675	DDX42	78	83.969	ENSRNOG00000009474	Ddx42	96	84.246	Rattus_norvegicus
ENSFALG00000004675	DDX42	74	88.228	ENSRBIG00000004781	DDX42	98	90.435	Rhinopithecus_bieti
ENSFALG00000004675	DDX42	74	88.228	ENSRROG00000029794	DDX42	95	85.552	Rhinopithecus_roxellana
ENSFALG00000004675	DDX42	78	85.989	ENSSBOG00000029624	DDX42	97	90.504	Saimiri_boliviensis_boliviensis
ENSFALG00000004675	DDX42	79	83.060	ENSSHAG00000012896	-	97	83.370	Sarcophilus_harrisii
ENSFALG00000004675	DDX42	68	80.774	ENSSFOG00015014064	ddx42	83	80.903	Scleropages_formosus
ENSFALG00000004675	DDX42	73	75.390	ENSSMAG00000009077	ddx42	98	70.040	Scophthalmus_maximus
ENSFALG00000004675	DDX42	74	75.566	ENSSDUG00000022221	ddx42	98	71.225	Seriola_dumerili
ENSFALG00000004675	DDX42	79	71.205	ENSSLDG00000018483	ddx42	98	70.640	Seriola_lalandi_dorsalis
ENSFALG00000004675	DDX42	72	89.939	ENSSARG00000009847	DDX42	90	88.186	Sorex_araneus
ENSFALG00000004675	DDX42	91	84.812	ENSSPUG00000018806	DDX42	96	84.812	Sphenodon_punctatus
ENSFALG00000004675	DDX42	73	76.344	ENSSPAG00000013055	ddx42	98	71.013	Stegastes_partitus
ENSFALG00000004675	DDX42	61	90.738	ENSSSCG00000017289	DDX42	85	88.858	Sus_scrofa
ENSFALG00000004675	DDX42	91	86.015	ENSTGUG00000001931	DDX42	98	86.015	Taeniopygia_guttata
ENSFALG00000004675	DDX42	72	76.348	ENSTRUG00000010711	ddx42	99	80.000	Takifugu_rubripes
ENSFALG00000004675	DDX42	66	89.973	ENSTBEG00000010159	DDX42	98	89.973	Tupaia_belangeri
ENSFALG00000004675	DDX42	74	87.559	ENSTTRG00000006962	DDX42	94	85.264	Tursiops_truncatus
ENSFALG00000004675	DDX42	72	89.316	ENSUAMG00000007321	DDX42	94	84.967	Ursus_americanus
ENSFALG00000004675	DDX42	72	88.836	ENSUMAG00000017438	DDX42	95	84.521	Ursus_maritimus
ENSFALG00000004675	DDX42	72	78.928	ENSVPAG00000009633	DDX42	90	77.473	Vicugna_pacos
ENSFALG00000004675	DDX42	72	90.488	ENSVVUG00000006095	DDX42	94	84.744	Vulpes_vulpes
ENSFALG00000004675	DDX42	77	78.781	ENSXETG00000003245	ddx42	95	76.170	Xenopus_tropicalis
ENSFALG00000004675	DDX42	66	71.846	ENSXCOG00000017560	ddx42	95	70.437	Xiphophorus_couchianus
ENSFALG00000004675	DDX42	79	72.191	ENSXMAG00000008138	ddx42	98	70.671	Xiphophorus_maculatus