EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004710 (Gene tree)
Gene ID: -
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 4967 bases
Position: chrJH603189.1:8627047-8632013
Accession: 17768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004905	Exo_endo_phos	PF03372.23	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000004929	TDP2-201	1450	-	ENSFALP00000004905	360 (aa)	-	U3JQ51

Gene Model

Click here to download ENSFALG00000004710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004710	TDP2	94	59.649	ENSG00000111802	TDP2	91	64.029	Homo_sapiens
ENSFALG00000004710	TDP2	70	55.118	ENSAPOG00000018379	-	89	55.118	Acanthochromis_polyacanthus
ENSFALG00000004710	TDP2	77	61.871	ENSAMEG00000010230	TDP2	99	61.871	Ailuropoda_melanoleuca
ENSFALG00000004710	TDP2	70	54.688	ENSAPEG00000004208	-	94	53.612	Amphiprion_percula
ENSFALG00000004710	TDP2	74	52.788	ENSATEG00000010663	-	90	51.429	Anabas_testudineus
ENSFALG00000004710	TDP2	93	61.947	ENSACAG00000002332	TDP2	92	62.059	Anolis_carolinensis
ENSFALG00000004710	TDP2	94	59.357	ENSANAG00000020033	TDP2	96	58.213	Aotus_nancymaae
ENSFALG00000004710	TDP2	71	54.475	ENSACLG00000016148	tdp2b	91	54.475	Astatotilapia_calliptera
ENSFALG00000004710	TDP2	76	51.449	ENSACLG00000016174	tdp2b	93	51.449	Astatotilapia_calliptera
ENSFALG00000004710	TDP2	76	51.812	ENSACLG00000016132	tdp2b	93	51.812	Astatotilapia_calliptera
ENSFALG00000004710	TDP2	96	47.467	ENSAMXG00000011775	tdp2b	95	46.944	Astyanax_mexicanus
ENSFALG00000004710	TDP2	76	50.182	ENSAMXG00000036549	tdp2a	89	50.182	Astyanax_mexicanus
ENSFALG00000004710	TDP2	94	59.593	ENSBTAG00000000365	TDP2	94	59.475	Bos_taurus
ENSFALG00000004710	TDP2	91	32.335	WBGene00013405	tdpt-1	86	32.036	Caenorhabditis_elegans
ENSFALG00000004710	TDP2	98	57.584	ENSCJAG00000021963	-	96	57.925	Callithrix_jacchus
ENSFALG00000004710	TDP2	98	58.427	ENSCJAG00000006074	TDP2	91	64.388	Callithrix_jacchus
ENSFALG00000004710	TDP2	99	56.267	ENSCAFG00000010428	TDP2	96	63.309	Canis_familiaris
ENSFALG00000004710	TDP2	77	63.309	ENSCAFG00020009994	TDP2	96	63.309	Canis_lupus_dingo
ENSFALG00000004710	TDP2	80	62.373	ENSCHIG00000015294	-	92	65.568	Capra_hircus
ENSFALG00000004710	TDP2	86	59.683	ENSTSYG00000037199	TDP2	100	60.577	Carlito_syrichta
ENSFALG00000004710	TDP2	94	61.584	ENSCPOG00000006390	TDP2	97	61.095	Cavia_porcellus
ENSFALG00000004710	TDP2	98	58.708	ENSCCAG00000022734	TDP2	91	64.748	Cebus_capucinus
ENSFALG00000004710	TDP2	94	59.064	ENSCATG00000022076	TDP2	91	63.669	Cercocebus_atys
ENSFALG00000004710	TDP2	94	61.111	ENSCLAG00000002072	TDP2	95	60.526	Chinchilla_lanigera
ENSFALG00000004710	TDP2	94	59.064	ENSCSAG00000007769	TDP2	95	58.944	Chlorocebus_sabaeus
ENSFALG00000004710	TDP2	95	69.679	ENSCPBG00000006551	TDP2	88	67.135	Chrysemys_picta_bellii
ENSFALG00000004710	TDP2	94	59.942	ENSCANG00000040122	TDP2	92	64.388	Colobus_angolensis_palliatus
ENSFALG00000004710	TDP2	95	55.394	ENSCGRG00001000384	Tdp2	92	55.102	Cricetulus_griseus_chok1gshd
ENSFALG00000004710	TDP2	95	53.353	ENSCGRG00000010250	Tdp2	94	53.936	Cricetulus_griseus_crigri
ENSFALG00000004710	TDP2	94	50.857	ENSCVAG00000003114	tdp2b	95	50.857	Cyprinodon_variegatus
ENSFALG00000004710	TDP2	94	48.361	ENSDARG00000035954	tdp2b	96	47.541	Danio_rerio
ENSFALG00000004710	TDP2	75	47.601	ENSDARG00000069941	tdp2a	58	47.601	Danio_rerio
ENSFALG00000004710	TDP2	100	56.906	ENSDNOG00000044082	TDP2	93	59.012	Dasypus_novemcinctus
ENSFALG00000004710	TDP2	77	64.029	ENSETEG00000019096	TDP2	100	64.029	Echinops_telfairi
ENSFALG00000004710	TDP2	78	47.163	ENSEBUG00000006535	tdp2a	66	47.163	Eptatretus_burgeri
ENSFALG00000004710	TDP2	94	59.767	ENSEASG00005007656	TDP2	94	59.649	Equus_asinus_asinus
ENSFALG00000004710	TDP2	94	59.357	ENSECAG00000014264	TDP2	94	59.649	Equus_caballus
ENSFALG00000004710	TDP2	94	59.706	ENSEEUG00000010776	TDP2	94	59.882	Erinaceus_europaeus
ENSFALG00000004710	TDP2	82	41.104	ENSELUG00000009321	tdp2a	84	46.840	Esox_lucius
ENSFALG00000004710	TDP2	93	50.000	ENSELUG00000016449	tdp2b	95	48.907	Esox_lucius
ENSFALG00000004710	TDP2	100	56.354	ENSFCAG00000025612	TDP2	94	57.895	Felis_catus
ENSFALG00000004710	TDP2	77	64.388	ENSFDAG00000006512	TDP2	96	64.388	Fukomys_damarensis
ENSFALG00000004710	TDP2	74	50.185	ENSFHEG00000013560	-	92	50.185	Fundulus_heteroclitus
ENSFALG00000004710	TDP2	99	70.704	ENSGALG00000013637	TDP2	93	71.594	Gallus_gallus
ENSFALG00000004710	TDP2	97	69.429	ENSGAGG00000002853	TDP2	88	68.696	Gopherus_agassizii
ENSFALG00000004710	TDP2	94	59.357	ENSGGOG00000014237	TDP2	91	63.669	Gorilla_gorilla
ENSFALG00000004710	TDP2	96	47.645	ENSHBUG00000002714	tdp2b	96	48.580	Haplochromis_burtoni
ENSFALG00000004710	TDP2	59	52.727	ENSHBUG00000005421	-	92	52.727	Haplochromis_burtoni
ENSFALG00000004710	TDP2	99	59.053	ENSHGLG00000008655	TDP2	95	60.472	Heterocephalus_glaber_female
ENSFALG00000004710	TDP2	99	59.331	ENSHGLG00100019087	TDP2	95	60.588	Heterocephalus_glaber_male
ENSFALG00000004710	TDP2	93	51.124	ENSIPUG00000013691	tdp2b	94	50.281	Ictalurus_punctatus
ENSFALG00000004710	TDP2	97	54.155	ENSJJAG00000021685	Tdp2	97	54.303	Jaculus_jaculus
ENSFALG00000004710	TDP2	76	51.636	ENSKMAG00000015485	-	88	51.636	Kryptolebias_marmoratus
ENSFALG00000004710	TDP2	96	56.389	ENSLACG00000008852	TDP2	95	58.621	Latimeria_chalumnae
ENSFALG00000004710	TDP2	76	59.273	ENSLOCG00000005817	tdp2b	99	59.273	Lepisosteus_oculatus
ENSFALG00000004710	TDP2	94	60.526	ENSLAFG00000002567	TDP2	97	60.411	Loxodonta_africana
ENSFALG00000004710	TDP2	94	59.357	ENSMFAG00000045296	TDP2	91	64.029	Macaca_fascicularis
ENSFALG00000004710	TDP2	94	59.357	ENSMMUG00000009803	TDP2	95	59.238	Macaca_mulatta
ENSFALG00000004710	TDP2	94	59.357	ENSMNEG00000038003	TDP2	91	64.029	Macaca_nemestrina
ENSFALG00000004710	TDP2	94	59.357	ENSMLEG00000028883	TDP2	91	63.669	Mandrillus_leucophaeus
ENSFALG00000004710	TDP2	97	50.000	ENSMAMG00000013654	tdp2b	97	50.423	Mastacembelus_armatus
ENSFALG00000004710	TDP2	96	47.091	ENSMZEG00005003950	tdp2b	96	48.011	Maylandia_zebra
ENSFALG00000004710	TDP2	68	51.210	ENSMZEG00005003980	-	80	51.210	Maylandia_zebra
ENSFALG00000004710	TDP2	69	53.815	ENSMZEG00005004055	tdp2b	82	54.217	Maylandia_zebra
ENSFALG00000004710	TDP2	81	51.027	ENSMZEG00005004077	tdp2b	92	52.747	Maylandia_zebra
ENSFALG00000004710	TDP2	76	51.095	ENSMZEG00005004126	tdp2b	93	51.095	Maylandia_zebra
ENSFALG00000004710	TDP2	73	51.331	ENSMZEG00005004103	tdp2b	88	51.331	Maylandia_zebra
ENSFALG00000004710	TDP2	75	52.768	ENSMZEG00005004153	tdp2b	95	52.768	Maylandia_zebra
ENSFALG00000004710	TDP2	99	71.549	ENSMGAG00000008014	TDP2	93	72.174	Meleagris_gallopavo
ENSFALG00000004710	TDP2	95	54.227	ENSMAUG00000014451	Tdp2	92	53.936	Mesocricetus_auratus
ENSFALG00000004710	TDP2	100	59.392	ENSMICG00000000039	TDP2	96	65.603	Microcebus_murinus
ENSFALG00000004710	TDP2	94	54.810	ENSMOCG00000002823	Tdp2	91	54.678	Microtus_ochrogaster
ENSFALG00000004710	TDP2	84	59.936	ENSMODG00000011653	TDP2	95	59.936	Monodelphis_domestica
ENSFALG00000004710	TDP2	69	54.545	ENSMALG00000005368	-	85	54.545	Monopterus_albus
ENSFALG00000004710	TDP2	94	55.425	MGP_CAROLIEiJ_G0018354	Tdp2	91	55.294	Mus_caroli
ENSFALG00000004710	TDP2	94	55.425	ENSMUSG00000035958	Tdp2	91	55.294	Mus_musculus
ENSFALG00000004710	TDP2	94	54.545	MGP_PahariEiJ_G0019417	Tdp2	91	54.412	Mus_pahari
ENSFALG00000004710	TDP2	94	55.000	MGP_SPRETEiJ_G0019220	Tdp2	91	54.971	Mus_spretus
ENSFALG00000004710	TDP2	94	56.851	ENSMPUG00000004516	TDP2	97	56.447	Mustela_putorius_furo
ENSFALG00000004710	TDP2	94	58.309	ENSMLUG00000013506	TDP2	95	58.309	Myotis_lucifugus
ENSFALG00000004710	TDP2	99	50.693	ENSNGAG00000001375	Tdp2	92	51.453	Nannospalax_galili
ENSFALG00000004710	TDP2	94	59.064	ENSNLEG00000002447	TDP2	96	58.944	Nomascus_leucogenys
ENSFALG00000004710	TDP2	94	59.357	ENSOPRG00000016299	TDP2	97	59.357	Ochotona_princeps
ENSFALG00000004710	TDP2	77	65.827	ENSODEG00000014018	TDP2	95	65.827	Octodon_degus
ENSFALG00000004710	TDP2	98	57.983	ENSOCUG00000013773	TDP2	94	58.430	Oryctolagus_cuniculus
ENSFALG00000004710	TDP2	75	50.000	ENSORLG00000001661	-	98	50.000	Oryzias_latipes
ENSFALG00000004710	TDP2	75	50.368	ENSORLG00020004634	-	98	50.000	Oryzias_latipes_hni
ENSFALG00000004710	TDP2	73	45.113	ENSORLG00015008190	-	98	44.891	Oryzias_latipes_hsok
ENSFALG00000004710	TDP2	82	46.465	ENSOMEG00000015899	-	93	51.190	Oryzias_melastigma
ENSFALG00000004710	TDP2	98	58.449	ENSOGAG00000025303	TDP2	93	60.117	Otolemur_garnettii
ENSFALG00000004710	TDP2	94	59.942	ENSPPAG00000029023	TDP2	92	64.388	Pan_paniscus
ENSFALG00000004710	TDP2	100	56.354	ENSPPRG00000015398	TDP2	94	57.895	Panthera_pardus
ENSFALG00000004710	TDP2	77	62.191	ENSPTIG00000018574	TDP2	97	62.191	Panthera_tigris_altaica
ENSFALG00000004710	TDP2	94	59.942	ENSPTRG00000017778	TDP2	91	64.388	Pan_troglodytes
ENSFALG00000004710	TDP2	94	58.772	ENSPANG00000017590	TDP2	91	63.669	Papio_anubis
ENSFALG00000004710	TDP2	93	50.867	ENSPKIG00000006483	tdp2b	94	50.867	Paramormyrops_kingsleyae
ENSFALG00000004710	TDP2	77	69.928	ENSPSIG00000004948	TDP2	96	69.928	Pelodiscus_sinensis
ENSFALG00000004710	TDP2	94	55.425	ENSPEMG00000001788	Tdp2	91	55.294	Peromyscus_maniculatus_bairdii
ENSFALG00000004710	TDP2	70	46.067	ENSPMAG00000001570	tdp2b	97	46.816	Petromyzon_marinus
ENSFALG00000004710	TDP2	94	60.580	ENSPCIG00000007316	TDP2	89	60.704	Phascolarctos_cinereus
ENSFALG00000004710	TDP2	75	50.181	ENSPFOG00000017990	-	99	50.181	Poecilia_formosa
ENSFALG00000004710	TDP2	82	46.885	ENSPLAG00000019439	-	82	51.923	Poecilia_latipinna
ENSFALG00000004710	TDP2	75	50.545	ENSPMEG00000010824	-	92	50.545	Poecilia_mexicana
ENSFALG00000004710	TDP2	94	59.064	ENSPPYG00000016282	TDP2	87	58.944	Pongo_abelii
ENSFALG00000004710	TDP2	94	60.117	ENSPCOG00000021415	TDP2	98	64.748	Propithecus_coquereli
ENSFALG00000004710	TDP2	81	47.573	ENSPNYG00000011504	tdp2b	93	48.780	Pundamilia_nyererei
ENSFALG00000004710	TDP2	57	47.087	ENSPNYG00000001944	-	69	53.892	Pundamilia_nyererei
ENSFALG00000004710	TDP2	96	47.368	ENSPNYG00000011532	tdp2b	96	48.295	Pundamilia_nyererei
ENSFALG00000004710	TDP2	72	53.077	ENSPNAG00000022162	tdp2a	66	53.077	Pygocentrus_nattereri
ENSFALG00000004710	TDP2	94	56.012	ENSRNOG00000018246	Tdp2	92	55.882	Rattus_norvegicus
ENSFALG00000004710	TDP2	94	59.649	ENSRBIG00000037119	TDP2	92	64.388	Rhinopithecus_bieti
ENSFALG00000004710	TDP2	94	59.649	ENSRROG00000005025	TDP2	92	64.029	Rhinopithecus_roxellana
ENSFALG00000004710	TDP2	98	58.708	ENSSBOG00000028734	TDP2	91	64.388	Saimiri_boliviensis_boliviensis
ENSFALG00000004710	TDP2	97	60.556	ENSSHAG00000002506	TDP2	92	60.933	Sarcophilus_harrisii
ENSFALG00000004710	TDP2	71	51.181	ENSSFOG00015011322	-	71	51.181	Scleropages_formosus
ENSFALG00000004710	TDP2	77	63.082	ENSSARG00000013547	TDP2	100	63.082	Sorex_araneus
ENSFALG00000004710	TDP2	99	58.583	ENSSPUG00000008288	TDP2	97	58.989	Sphenodon_punctatus
ENSFALG00000004710	TDP2	94	60.526	ENSSSCG00000001092	TDP2	94	60.411	Sus_scrofa
ENSFALG00000004710	TDP2	73	89.655	ENSTGUG00000009035	TDP2	100	89.655	Taeniopygia_guttata
ENSFALG00000004710	TDP2	73	52.256	ENSTRUG00000012218	-	92	52.256	Takifugu_rubripes
ENSFALG00000004710	TDP2	94	50.992	ENSTRUG00000014347	tdp2b	96	50.142	Takifugu_rubripes
ENSFALG00000004710	TDP2	71	54.023	ENSTNIG00000010260	TDP2	99	54.023	Tetraodon_nigroviridis
ENSFALG00000004710	TDP2	95	50.986	ENSTNIG00000017792	tdp2b	96	50.423	Tetraodon_nigroviridis
ENSFALG00000004710	TDP2	94	59.064	ENSTTRG00000016376	TDP2	94	59.824	Tursiops_truncatus
ENSFALG00000004710	TDP2	97	54.830	ENSUAMG00000025939	TDP2	97	54.310	Ursus_americanus
ENSFALG00000004710	TDP2	77	62.230	ENSUMAG00000020111	TDP2	93	62.230	Ursus_maritimus
ENSFALG00000004710	TDP2	98	55.707	ENSXETG00000014826	tdp2	95	55.211	Xenopus_tropicalis
ENSFALG00000004710	TDP2	70	52.549	ENSXCOG00000010778	-	71	52.549	Xiphophorus_couchianus
ENSFALG00000004710	TDP2	78	49.650	ENSXMAG00000022252	-	73	53.150	Xiphophorus_maculatus