EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004797 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 6931 bases
Position: chrJH603259.1:1210786-1217716
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000004999	Methyltr_RsmB-F	PF01189.17	4.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005023	-	2901	-	ENSFALP00000004999	632 (aa)	-	U3JQE5

Gene Model

Click here to download ENSFALG00000004797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004797	-	81	62.868	ENSAPOG00000023186	nop2	90	56.391	Acanthochromis_polyacanthus
ENSFALG00000004797	-	77	72.745	ENSAMEG00000014268	-	62	70.677	Ailuropoda_melanoleuca
ENSFALG00000004797	-	70	70.068	ENSACIG00000011803	nop2	81	57.429	Amphilophus_citrinellus
ENSFALG00000004797	-	70	70.522	ENSAPEG00000011152	nop2	83	58.987	Amphiprion_percula
ENSFALG00000004797	-	95	67.136	ENSACAG00000006397	-	87	66.355	Anolis_carolinensis
ENSFALG00000004797	-	85	61.698	ENSAMXG00000018985	nop2	75	65.880	Astyanax_mexicanus
ENSFALG00000004797	-	76	72.541	ENSBTAG00000014733	NOP2	58	73.499	Bos_taurus
ENSFALG00000004797	-	65	56.448	WBGene00021073	nol-1	76	55.183	Caenorhabditis_elegans
ENSFALG00000004797	-	83	69.794	ENSCAFG00000015034	NOP2	62	69.886	Canis_familiaris
ENSFALG00000004797	-	83	69.115	ENSCAFG00020002884	-	62	69.202	Canis_lupus_dingo
ENSFALG00000004797	-	87	66.725	ENSCHIG00000018560	-	64	70.342	Capra_hircus
ENSFALG00000004797	-	85	62.075	ENSTSYG00000006030	-	58	68.350	Carlito_syrichta
ENSFALG00000004797	-	75	70.613	ENSCAPG00000011953	-	56	79.052	Cavia_aperea
ENSFALG00000004797	-	75	73.950	ENSCPOG00000020690	-	57	75.000	Cavia_porcellus
ENSFALG00000004797	-	73	75.589	ENSCLAG00000014440	-	64	69.216	Chinchilla_lanigera
ENSFALG00000004797	-	75	74.012	ENSCSAG00000010484	-	62	70.746	Chlorocebus_sabaeus
ENSFALG00000004797	-	72	81.898	ENSCPBG00000027725	-	82	81.898	Chrysemys_picta_bellii
ENSFALG00000004797	-	70	62.670	ENSCING00000008548	-	66	68.101	Ciona_intestinalis
ENSFALG00000004797	-	75	72.614	ENSCANG00000038803	-	73	75.054	Colobus_angolensis_palliatus
ENSFALG00000004797	-	76	74.636	ENSCGRG00001020970	Nop2	65	69.288	Cricetulus_griseus_chok1gshd
ENSFALG00000004797	-	76	74.636	ENSCGRG00000015782	Nop2	65	69.288	Cricetulus_griseus_crigri
ENSFALG00000004797	-	77	56.311	ENSCSEG00000020126	nop2	88	53.159	Cynoglossus_semilaevis
ENSFALG00000004797	-	82	62.970	ENSCVAG00000001162	nop2	74	62.500	Cyprinodon_variegatus
ENSFALG00000004797	-	91	61.231	ENSDARG00000043304	nop2	83	61.489	Danio_rerio
ENSFALG00000004797	-	76	73.156	ENSDNOG00000001133	-	59	73.695	Dasypus_novemcinctus
ENSFALG00000004797	-	62	64.213	FBgn0033741	CG8545	60	52.920	Drosophila_melanogaster
ENSFALG00000004797	-	53	78.313	ENSEBUG00000009820	nop2	70	69.643	Eptatretus_burgeri
ENSFALG00000004797	-	76	72.098	ENSEASG00005016153	-	56	75.000	Equus_asinus_asinus
ENSFALG00000004797	-	81	68.979	ENSECAG00000012639	NOP2	57	73.784	Equus_caballus
ENSFALG00000004797	-	73	68.737	ENSEEUG00000011692	-	66	68.951	Erinaceus_europaeus
ENSFALG00000004797	-	83	63.803	ENSELUG00000017384	nop2	72	63.985	Esox_lucius
ENSFALG00000004797	-	85	67.831	ENSFCAG00000006876	-	62	69.450	Felis_catus
ENSFALG00000004797	-	72	71.116	ENSFHEG00000014327	nop2	74	69.528	Fundulus_heteroclitus
ENSFALG00000004797	-	72	68.103	ENSGMOG00000011005	nop2	100	67.949	Gadus_morhua
ENSFALG00000004797	-	74	87.768	ENSGALG00000037807	-	84	87.773	Gallus_gallus
ENSFALG00000004797	-	71	68.996	ENSGACG00000010317	nop2	98	69.414	Gasterosteus_aculeatus
ENSFALG00000004797	-	93	74.746	ENSGAGG00000001438	-	83	75.556	Gopherus_agassizii
ENSFALG00000004797	-	75	73.237	ENSGGOG00000001926	NOP2	73	75.699	Gorilla_gorilla
ENSFALG00000004797	-	68	60.091	ENSHBUG00000014908	nop2	77	50.924	Haplochromis_burtoni
ENSFALG00000004797	-	90	58.766	ENSHCOG00000017852	nop2	80	59.016	Hippocampus_comes
ENSFALG00000004797	-	86	61.775	ENSIPUG00000008198	nop2	81	62.393	Ictalurus_punctatus
ENSFALG00000004797	-	75	67.909	ENSLBEG00000007281	nop2	74	61.837	Labrus_bergylta
ENSFALG00000004797	-	80	58.845	ENSLOCG00000007050	nop2	95	59.630	Lepisosteus_oculatus
ENSFALG00000004797	-	76	73.511	ENSLAFG00000002784	-	64	68.939	Loxodonta_africana
ENSFALG00000004797	-	77	66.119	ENSMAMG00000001909	nop2	80	57.209	Mastacembelus_armatus
ENSFALG00000004797	-	63	72.372	ENSMZEG00005017552	nop2	77	58.997	Maylandia_zebra
ENSFALG00000004797	-	94	81.605	ENSMGAG00000014082	-	97	87.879	Meleagris_gallopavo
ENSFALG00000004797	-	76	67.327	ENSMICG00000006570	-	62	63.787	Microcebus_murinus
ENSFALG00000004797	-	84	69.331	ENSMOCG00000017237	Nop2	65	69.418	Microtus_ochrogaster
ENSFALG00000004797	-	88	64.655	ENSMODG00000018077	-	68	72.435	Monodelphis_domestica
ENSFALG00000004797	-	81	69.482	ENSMUSG00000038279	Nop2	63	69.380	Mus_musculus
ENSFALG00000004797	-	76	72.912	ENSMPUG00000016865	-	56	76.395	Mustela_putorius_furo
ENSFALG00000004797	-	66	78.910	ENSMLUG00000014333	-	53	74.194	Myotis_lucifugus
ENSFALG00000004797	-	80	69.922	ENSNGAG00000019010	Nop2	58	73.774	Nannospalax_galili
ENSFALG00000004797	-	68	62.844	ENSNBRG00000001113	nop2	77	52.020	Neolamprologus_brichardi
ENSFALG00000004797	-	73	74.518	ENSNLEG00000004242	-	73	74.678	Nomascus_leucogenys
ENSFALG00000004797	-	81	69.903	ENSMEUG00000015287	-	74	69.941	Notamacropus_eugenii
ENSFALG00000004797	-	70	68.243	ENSOPRG00000003412	-	58	63.294	Ochotona_princeps
ENSFALG00000004797	-	87	61.151	ENSONIG00000012896	nop2	75	60.606	Oreochromis_niloticus
ENSFALG00000004797	-	78	71.486	ENSOCUG00000008203	-	57	74.580	Oryctolagus_cuniculus
ENSFALG00000004797	-	84	60.139	ENSORLG00020005484	nop2	81	59.003	Oryzias_latipes_hni
ENSFALG00000004797	-	63	67.172	ENSOMEG00000012751	nop2	59	67.172	Oryzias_melastigma
ENSFALG00000004797	-	79	71.063	ENSOARG00000007641	-	58	73.499	Ovis_aries
ENSFALG00000004797	-	85	67.257	ENSPPRG00000012300	-	63	68.373	Panthera_pardus
ENSFALG00000004797	-	85	66.430	ENSPTIG00000020543	-	63	67.523	Panthera_tigris_altaica
ENSFALG00000004797	-	75	73.389	ENSPANG00000024426	-	73	75.216	Papio_anubis
ENSFALG00000004797	-	84	76.481	ENSPSIG00000016127	-	89	76.296	Pelodiscus_sinensis
ENSFALG00000004797	-	73	74.255	ENSPEMG00000013138	Nop2	59	73.069	Peromyscus_maniculatus_bairdii
ENSFALG00000004797	-	63	74.564	ENSPMAG00000009402	nop2	99	74.874	Petromyzon_marinus
ENSFALG00000004797	-	84	66.852	ENSPCIG00000001788	-	69	67.228	Phascolarctos_cinereus
ENSFALG00000004797	-	81	63.602	ENSPFOG00000013054	nop2	71	63.602	Poecilia_formosa
ENSFALG00000004797	-	64	74.505	ENSPLAG00000005975	nop2	71	64.991	Poecilia_latipinna
ENSFALG00000004797	-	72	68.432	ENSPMEG00000016775	nop2	72	62.837	Poecilia_mexicana
ENSFALG00000004797	-	63	75.000	ENSPREG00000010428	nop2	72	61.152	Poecilia_reticulata
ENSFALG00000004797	-	75	72.727	ENSPPYG00000004191	-	62	69.772	Pongo_abelii
ENSFALG00000004797	-	85	65.328	ENSPCAG00000007033	-	59	67.105	Procavia_capensis
ENSFALG00000004797	-	68	63.510	ENSPNYG00000023163	nop2	75	55.420	Pundamilia_nyererei
ENSFALG00000004797	-	88	61.395	ENSPNAG00000019880	nop2	76	61.512	Pygocentrus_nattereri
ENSFALG00000004797	-	76	72.141	ENSRNOG00000018453	Nop2	60	72.842	Rattus_norvegicus
ENSFALG00000004797	-	75	73.029	ENSRROG00000041019	-	73	75.484	Rhinopithecus_roxellana
ENSFALG00000004797	-	56	60.282	YNL061W	NOP2	61	57.289	Saccharomyces_cerevisiae
ENSFALG00000004797	-	80	70.784	ENSSBOG00000034622	-	62	69.466	Saimiri_boliviensis_boliviensis
ENSFALG00000004797	-	70	75.561	ENSSHAG00000015028	-	89	63.509	Sarcophilus_harrisii
ENSFALG00000004797	-	91	58.454	ENSSFOG00015002458	nop2	82	58.671	Scleropages_formosus
ENSFALG00000004797	-	59	81.875	ENSSARG00000004520	-	58	81.875	Sorex_araneus
ENSFALG00000004797	-	96	66.561	ENSSPUG00000015240	-	91	65.397	Sphenodon_punctatus
ENSFALG00000004797	-	85	67.523	ENSSSCG00000000696	-	73	70.172	Sus_scrofa
ENSFALG00000004797	-	85	84.771	ENSTGUG00000013336	-	85	84.404	Taeniopygia_guttata
ENSFALG00000004797	-	77	61.111	ENSTRUG00000002011	nop2	75	55.363	Takifugu_rubripes
ENSFALG00000004797	-	82	63.900	ENSTNIG00000008046	nop2	89	58.961	Tetraodon_nigroviridis
ENSFALG00000004797	-	73	72.881	ENSTTRG00000016100	-	53	73.448	Tursiops_truncatus
ENSFALG00000004797	-	85	68.978	ENSUAMG00000016105	-	62	70.943	Ursus_americanus
ENSFALG00000004797	-	85	68.248	ENSUMAG00000007220	-	62	70.189	Ursus_maritimus
ENSFALG00000004797	-	83	69.868	ENSVVUG00000011466	-	67	69.011	Vulpes_vulpes
ENSFALG00000004797	-	81	63.014	ENSXETG00000011515	nop2	81	62.524	Xenopus_tropicalis
ENSFALG00000004797	-	73	68.973	ENSXMAG00000011483	nop2	71	64.220	Xiphophorus_maculatus