EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000004873 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 46779 bases
Position: chrJH603225.1:54951-101729
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005086	zf-C2H2	PF00096.26	4.4e-33	1	4
ENSFALP00000005086	zf-C2H2	PF00096.26	4.4e-33	2	4
ENSFALP00000005086	zf-C2H2	PF00096.26	4.4e-33	3	4
ENSFALP00000005086	zf-C2H2	PF00096.26	4.4e-33	4	4
ENSFALP00000005086	zf-met	PF12874.7	1.9e-05	1	2
ENSFALP00000005086	zf-met	PF12874.7	1.9e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005111	PRDM10-201	3900	-	ENSFALP00000005086	1182 (aa)	-	U3JQN2

Gene Model

Click here to download ENSFALG00000004873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000004873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000004873	PRDM10	100	80.667	ENSG00000170325	PRDM10	99	85.813	Homo_sapiens
ENSFALG00000004873	PRDM10	100	81.780	ENSAMEG00000002425	PRDM10	100	82.030	Ailuropoda_melanoleuca
ENSFALG00000004873	PRDM10	100	91.414	ENSAPLG00000004858	PRDM10	100	92.088	Anas_platyrhynchos
ENSFALG00000004873	PRDM10	100	68.412	ENSANAG00000022064	PRDM10	100	68.662	Aotus_nancymaae
ENSFALG00000004873	PRDM10	96	84.211	ENSBTAG00000019001	PRDM10	100	83.971	Bos_taurus
ENSFALG00000004873	PRDM10	100	80.651	ENSCJAG00000009235	PRDM10	100	81.068	Callithrix_jacchus
ENSFALG00000004873	PRDM10	100	80.351	ENSCAFG00000010164	PRDM10	100	80.268	Canis_familiaris
ENSFALG00000004873	PRDM10	100	79.129	ENSCAFG00020010152	PRDM10	100	82.900	Canis_lupus_dingo
ENSFALG00000004873	PRDM10	100	80.284	ENSCHIG00000026530	PRDM10	100	80.451	Capra_hircus
ENSFALG00000004873	PRDM10	100	81.250	ENSTSYG00000000544	PRDM10	100	81.417	Carlito_syrichta
ENSFALG00000004873	PRDM10	100	72.208	ENSCAPG00000017296	PRDM10	97	80.402	Cavia_aperea
ENSFALG00000004873	PRDM10	89	79.088	ENSCPOG00000000389	PRDM10	97	79.088	Cavia_porcellus
ENSFALG00000004873	PRDM10	100	80.484	ENSCCAG00000024567	PRDM10	100	80.984	Cebus_capucinus
ENSFALG00000004873	PRDM10	100	80.968	ENSCATG00000040031	PRDM10	100	81.553	Cercocebus_atys
ENSFALG00000004873	PRDM10	100	79.074	ENSCLAG00000014605	PRDM10	99	83.913	Chinchilla_lanigera
ENSFALG00000004873	PRDM10	100	80.885	ENSCSAG00000002202	PRDM10	100	81.469	Chlorocebus_sabaeus
ENSFALG00000004873	PRDM10	100	92.198	ENSCPBG00000026880	PRDM10	99	92.869	Chrysemys_picta_bellii
ENSFALG00000004873	PRDM10	100	80.734	ENSCANG00000032669	PRDM10	100	81.234	Colobus_angolensis_palliatus
ENSFALG00000004873	PRDM10	100	79.733	ENSCGRG00001021647	Prdm10	97	84.455	Cricetulus_griseus_chok1gshd
ENSFALG00000004873	PRDM10	100	79.733	ENSCGRG00000006562	Prdm10	97	84.455	Cricetulus_griseus_crigri
ENSFALG00000004873	PRDM10	82	83.080	ENSDNOG00000001366	PRDM10	95	83.485	Dasypus_novemcinctus
ENSFALG00000004873	PRDM10	100	80.869	ENSDORG00000014292	Prdm10	99	84.680	Dipodomys_ordii
ENSFALG00000004873	PRDM10	100	80.100	ENSEASG00005022914	PRDM10	98	83.677	Equus_asinus_asinus
ENSFALG00000004873	PRDM10	100	80.017	ENSECAG00000011499	PRDM10	99	85.161	Equus_caballus
ENSFALG00000004873	PRDM10	98	81.702	ENSFCAG00000004111	PRDM10	96	82.298	Felis_catus
ENSFALG00000004873	PRDM10	100	79.038	ENSFDAG00000017311	PRDM10	97	82.840	Fukomys_damarensis
ENSFALG00000004873	PRDM10	100	94.108	ENSGALG00000033660	PRDM10	99	94.751	Gallus_gallus
ENSFALG00000004873	PRDM10	89	66.635	ENSGACG00000012293	prdm10	98	66.667	Gasterosteus_aculeatus
ENSFALG00000004873	PRDM10	100	90.444	ENSGAGG00000012523	PRDM10	99	90.947	Gopherus_agassizii
ENSFALG00000004873	PRDM10	100	80.683	ENSGGOG00000015359	PRDM10	100	81.182	Gorilla_gorilla
ENSFALG00000004873	PRDM10	100	79.688	ENSHGLG00000001106	PRDM10	97	85.373	Heterocephalus_glaber_female
ENSFALG00000004873	PRDM10	100	79.901	ENSHGLG00100002350	PRDM10	97	85.373	Heterocephalus_glaber_male
ENSFALG00000004873	PRDM10	100	80.817	ENSSTOG00000002015	PRDM10	100	81.234	Ictidomys_tridecemlineatus
ENSFALG00000004873	PRDM10	82	80.483	ENSJJAG00000021493	Prdm10	98	75.431	Jaculus_jaculus
ENSFALG00000004873	PRDM10	100	78.708	ENSLAFG00000031867	PRDM10	96	83.622	Loxodonta_africana
ENSFALG00000004873	PRDM10	100	80.801	ENSMFAG00000031008	PRDM10	100	81.386	Macaca_fascicularis
ENSFALG00000004873	PRDM10	100	80.801	ENSMMUG00000017555	PRDM10	100	81.386	Macaca_mulatta
ENSFALG00000004873	PRDM10	100	80.718	ENSMNEG00000036493	PRDM10	100	81.302	Macaca_nemestrina
ENSFALG00000004873	PRDM10	95	76.105	ENSMLEG00000042028	PRDM10	99	79.747	Mandrillus_leucophaeus
ENSFALG00000004873	PRDM10	100	94.336	ENSMGAG00000001112	PRDM10	100	94.336	Meleagris_gallopavo
ENSFALG00000004873	PRDM10	100	80.885	ENSMICG00000013888	PRDM10	100	81.469	Microcebus_murinus
ENSFALG00000004873	PRDM10	100	78.513	ENSMOCG00000021853	Prdm10	98	84.870	Microtus_ochrogaster
ENSFALG00000004873	PRDM10	73	87.188	ENSMODG00000004979	PRDM10	99	86.621	Monodelphis_domestica
ENSFALG00000004873	PRDM10	100	79.085	ENSMUSG00000042496	Prdm10	98	84.004	Mus_musculus
ENSFALG00000004873	PRDM10	100	80.449	MGP_SPRETEiJ_G0033061	-	98	83.906	Mus_spretus
ENSFALG00000004873	PRDM10	100	81.203	ENSMPUG00000008711	PRDM10	99	81.788	Mustela_putorius_furo
ENSFALG00000004873	PRDM10	100	79.917	ENSMLUG00000013051	PRDM10	100	80.833	Myotis_lucifugus
ENSFALG00000004873	PRDM10	100	81.104	ENSNGAG00000000580	Prdm10	99	85.136	Nannospalax_galili
ENSFALG00000004873	PRDM10	100	80.968	ENSNLEG00000007488	PRDM10	100	81.553	Nomascus_leucogenys
ENSFALG00000004873	PRDM10	100	78.115	ENSODEG00000005309	PRDM10	99	83.881	Octodon_degus
ENSFALG00000004873	PRDM10	100	78.275	ENSOANG00000000577	-	100	77.529	Ornithorhynchus_anatinus
ENSFALG00000004873	PRDM10	100	80.268	ENSOCUG00000003736	PRDM10	100	80.268	Oryctolagus_cuniculus
ENSFALG00000004873	PRDM10	100	80.200	ENSOGAG00000010723	PRDM10	100	80.283	Otolemur_garnettii
ENSFALG00000004873	PRDM10	100	80.368	ENSOARG00000014507	PRDM10	100	80.535	Ovis_aries
ENSFALG00000004873	PRDM10	100	80.683	ENSPPAG00000042881	PRDM10	100	81.182	Pan_paniscus
ENSFALG00000004873	PRDM10	100	80.952	ENSPPRG00000007002	PRDM10	100	81.537	Panthera_pardus
ENSFALG00000004873	PRDM10	100	80.952	ENSPTIG00000013331	PRDM10	100	81.537	Panthera_tigris_altaica
ENSFALG00000004873	PRDM10	100	80.683	ENSPTRG00000004477	PRDM10	100	81.266	Pan_troglodytes
ENSFALG00000004873	PRDM10	100	80.968	ENSPANG00000017470	PRDM10	100	81.553	Papio_anubis
ENSFALG00000004873	PRDM10	100	78.917	ENSPEMG00000014985	Prdm10	97	84.631	Peromyscus_maniculatus_bairdii
ENSFALG00000004873	PRDM10	100	80.833	ENSPPYG00000004061	PRDM10	100	81.333	Pongo_abelii
ENSFALG00000004873	PRDM10	92	72.883	ENSPCAG00000014514	PRDM10	99	72.924	Procavia_capensis
ENSFALG00000004873	PRDM10	100	68.027	ENSPCOG00000023406	PRDM10	100	68.360	Propithecus_coquereli
ENSFALG00000004873	PRDM10	100	80.849	ENSPVAG00000012764	PRDM10	100	81.182	Pteropus_vampyrus
ENSFALG00000004873	PRDM10	100	81.135	ENSRNOG00000007853	Prdm10	100	81.135	Rattus_norvegicus
ENSFALG00000004873	PRDM10	100	80.750	ENSRBIG00000030924	PRDM10	100	81.250	Rhinopithecus_bieti
ENSFALG00000004873	PRDM10	100	80.750	ENSRROG00000034334	PRDM10	100	81.250	Rhinopithecus_roxellana
ENSFALG00000004873	PRDM10	100	80.667	ENSSBOG00000008773	PRDM10	100	81.167	Saimiri_boliviensis_boliviensis
ENSFALG00000004873	PRDM10	99	83.319	ENSSHAG00000004503	PRDM10	99	83.236	Sarcophilus_harrisii
ENSFALG00000004873	PRDM10	65	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSFALG00000004873	PRDM10	94	89.665	ENSSPUG00000001178	PRDM10	99	90.048	Sphenodon_punctatus
ENSFALG00000004873	PRDM10	100	79.933	ENSSSCG00000015243	PRDM10	99	82.034	Sus_scrofa
ENSFALG00000004873	PRDM10	100	92.683	ENSTGUG00000000530	PRDM10	100	93.272	Taeniopygia_guttata
ENSFALG00000004873	PRDM10	95	75.862	ENSTBEG00000007221	PRDM10	94	74.848	Tupaia_belangeri
ENSFALG00000004873	PRDM10	100	78.930	ENSTTRG00000009189	PRDM10	100	79.365	Tursiops_truncatus
ENSFALG00000004873	PRDM10	91	80.939	ENSUAMG00000018832	PRDM10	94	88.229	Ursus_americanus
ENSFALG00000004873	PRDM10	100	80.433	ENSUMAG00000003167	PRDM10	99	85.552	Ursus_maritimus
ENSFALG00000004873	PRDM10	100	80.936	ENSVVUG00000019878	PRDM10	100	81.438	Vulpes_vulpes
ENSFALG00000004873	PRDM10	100	73.468	ENSXETG00000032173	PRDM10	100	73.636	Xenopus_tropicalis