EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000005006 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 18454 bases
Position: chrJH603443.1:224333-242786
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005216	zf-C3HC	PF07967.13	7.4e-34	1	1
ENSFALP00000005216	Rsm1	PF08600.10	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005241	ZC3HC1-201	1887	-	ENSFALP00000005216	457 (aa)	-	U3JR12

Gene Model

Click here to download ENSFALG00000005006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005006	ZC3HC1	99	60.860	ENSG00000091732	ZC3HC1	94	60.860	Homo_sapiens
ENSFALG00000005006	ZC3HC1	94	43.736	ENSAPOG00000009078	zc3hc1	86	43.736	Acanthochromis_polyacanthus
ENSFALG00000005006	ZC3HC1	100	60.043	ENSAMEG00000005425	ZC3HC1	90	60.043	Ailuropoda_melanoleuca
ENSFALG00000005006	ZC3HC1	94	41.850	ENSACIG00000019513	zc3hc1	86	41.667	Amphilophus_citrinellus
ENSFALG00000005006	ZC3HC1	94	42.888	ENSAOCG00000024310	zc3hc1	86	43.736	Amphiprion_ocellaris
ENSFALG00000005006	ZC3HC1	94	42.888	ENSAPEG00000004907	zc3hc1	86	43.736	Amphiprion_percula
ENSFALG00000005006	ZC3HC1	88	42.890	ENSATEG00000016898	zc3hc1	83	42.890	Anabas_testudineus
ENSFALG00000005006	ZC3HC1	98	69.248	ENSAPLG00000003832	ZC3HC1	99	69.248	Anas_platyrhynchos
ENSFALG00000005006	ZC3HC1	100	59.579	ENSACAG00000001638	ZC3HC1	90	59.579	Anolis_carolinensis
ENSFALG00000005006	ZC3HC1	100	59.829	ENSANAG00000022213	ZC3HC1	92	61.000	Aotus_nancymaae
ENSFALG00000005006	ZC3HC1	94	42.129	ENSACLG00000025033	zc3hc1	93	42.163	Astatotilapia_calliptera
ENSFALG00000005006	ZC3HC1	95	41.309	ENSAMXG00000036792	zc3hc1	88	41.084	Astyanax_mexicanus
ENSFALG00000005006	ZC3HC1	100	59.829	ENSBTAG00000011247	ZC3HC1	90	59.829	Bos_taurus
ENSFALG00000005006	ZC3HC1	100	60.256	ENSCJAG00000010536	ZC3HC1	92	60.000	Callithrix_jacchus
ENSFALG00000005006	ZC3HC1	100	59.829	ENSCAFG00000028735	-	90	59.829	Canis_familiaris
ENSFALG00000005006	ZC3HC1	100	59.829	ENSCAFG00000029401	-	89	59.829	Canis_familiaris
ENSFALG00000005006	ZC3HC1	100	60.043	ENSCAFG00000001499	-	89	60.043	Canis_familiaris
ENSFALG00000005006	ZC3HC1	100	60.043	ENSCAFG00000031850	-	90	60.043	Canis_familiaris
ENSFALG00000005006	ZC3HC1	100	58.974	ENSCAFG00020023333	-	90	58.974	Canis_lupus_dingo
ENSFALG00000005006	ZC3HC1	100	59.829	ENSCAFG00020006829	-	90	59.829	Canis_lupus_dingo
ENSFALG00000005006	ZC3HC1	100	53.092	ENSCHIG00000014103	ZC3HC1	90	53.092	Capra_hircus
ENSFALG00000005006	ZC3HC1	100	59.615	ENSTSYG00000002843	ZC3HC1	90	59.785	Carlito_syrichta
ENSFALG00000005006	ZC3HC1	100	45.513	ENSCAPG00000016300	ZC3HC1	87	60.294	Cavia_aperea
ENSFALG00000005006	ZC3HC1	100	59.483	ENSCPOG00000014034	ZC3HC1	90	58.836	Cavia_porcellus
ENSFALG00000005006	ZC3HC1	100	46.795	ENSCCAG00000020384	ZC3HC1	100	57.384	Cebus_capucinus
ENSFALG00000005006	ZC3HC1	100	60.684	ENSCATG00000023130	ZC3HC1	97	59.402	Cercocebus_atys
ENSFALG00000005006	ZC3HC1	91	46.336	ENSCLAG00000008260	ZC3HC1	89	45.863	Chinchilla_lanigera
ENSFALG00000005006	ZC3HC1	81	58.575	ENSCSAG00000009881	ZC3HC1	97	58.575	Chlorocebus_sabaeus
ENSFALG00000005006	ZC3HC1	99	60.215	ENSCHOG00000011846	ZC3HC1	99	60.215	Choloepus_hoffmanni
ENSFALG00000005006	ZC3HC1	100	66.452	ENSCPBG00000017519	ZC3HC1	91	66.452	Chrysemys_picta_bellii
ENSFALG00000005006	ZC3HC1	100	60.256	ENSCANG00000029091	ZC3HC1	92	59.500	Colobus_angolensis_palliatus
ENSFALG00000005006	ZC3HC1	100	57.265	ENSCGRG00001018805	Zc3hc1	90	57.265	Cricetulus_griseus_chok1gshd
ENSFALG00000005006	ZC3HC1	100	56.197	ENSCGRG00000017114	Zc3hc1	90	56.197	Cricetulus_griseus_crigri
ENSFALG00000005006	ZC3HC1	94	43.516	ENSCSEG00000009284	zc3hc1	84	44.371	Cynoglossus_semilaevis
ENSFALG00000005006	ZC3HC1	98	40.717	ENSCVAG00000011566	zc3hc1	90	40.717	Cyprinodon_variegatus
ENSFALG00000005006	ZC3HC1	98	45.223	ENSDARG00000062651	zc3hc1	90	45.223	Danio_rerio
ENSFALG00000005006	ZC3HC1	100	60.256	ENSDNOG00000045016	ZC3HC1	90	60.256	Dasypus_novemcinctus
ENSFALG00000005006	ZC3HC1	91	59.251	ENSDORG00000008697	Zc3hc1	88	60.606	Dipodomys_ordii
ENSFALG00000005006	ZC3HC1	99	59.957	ENSEASG00005008789	ZC3HC1	97	59.957	Equus_asinus_asinus
ENSFALG00000005006	ZC3HC1	99	59.871	ENSECAG00000017886	ZC3HC1	90	59.871	Equus_caballus
ENSFALG00000005006	ZC3HC1	73	61.111	ENSEEUG00000003123	ZC3HC1	66	61.111	Erinaceus_europaeus
ENSFALG00000005006	ZC3HC1	97	44.397	ENSELUG00000023168	zc3hc1	88	45.378	Esox_lucius
ENSFALG00000005006	ZC3HC1	100	59.829	ENSFCAG00000010429	ZC3HC1	96	58.761	Felis_catus
ENSFALG00000005006	ZC3HC1	100	59.615	ENSFDAG00000019897	ZC3HC1	90	59.615	Fukomys_damarensis
ENSFALG00000005006	ZC3HC1	99	41.336	ENSFHEG00000020149	zc3hc1	91	41.004	Fundulus_heteroclitus
ENSFALG00000005006	ZC3HC1	97	39.050	ENSGMOG00000002914	zc3hc1	92	39.413	Gadus_morhua
ENSFALG00000005006	ZC3HC1	100	72.294	ENSGALG00000008003	ZC3HC1	92	72.294	Gallus_gallus
ENSFALG00000005006	ZC3HC1	95	41.886	ENSGAFG00000016095	zc3hc1	87	41.886	Gambusia_affinis
ENSFALG00000005006	ZC3HC1	95	42.484	ENSGACG00000019706	zc3hc1	87	42.516	Gasterosteus_aculeatus
ENSFALG00000005006	ZC3HC1	85	65.664	ENSGAGG00000016106	ZC3HC1	100	66.416	Gopherus_agassizii
ENSFALG00000005006	ZC3HC1	99	61.075	ENSGGOG00000015504	ZC3HC1	94	61.075	Gorilla_gorilla
ENSFALG00000005006	ZC3HC1	94	42.129	ENSHBUG00000008347	zc3hc1	86	42.163	Haplochromis_burtoni
ENSFALG00000005006	ZC3HC1	100	61.111	ENSHGLG00000005085	ZC3HC1	90	61.111	Heterocephalus_glaber_female
ENSFALG00000005006	ZC3HC1	100	60.897	ENSHGLG00100011395	ZC3HC1	90	60.897	Heterocephalus_glaber_male
ENSFALG00000005006	ZC3HC1	99	39.394	ENSHCOG00000014309	zc3hc1	89	40.302	Hippocampus_comes
ENSFALG00000005006	ZC3HC1	100	60.470	ENSSTOG00000023599	-	90	60.470	Ictidomys_tridecemlineatus
ENSFALG00000005006	ZC3HC1	97	42.194	ENSKMAG00000015315	zc3hc1	84	41.772	Kryptolebias_marmoratus
ENSFALG00000005006	ZC3HC1	95	43.791	ENSLBEG00000017325	zc3hc1	92	43.573	Labrus_bergylta
ENSFALG00000005006	ZC3HC1	79	53.846	ENSLACG00000013032	ZC3HC1	88	53.846	Latimeria_chalumnae
ENSFALG00000005006	ZC3HC1	96	51.535	ENSLOCG00000015963	zc3hc1	88	52.079	Lepisosteus_oculatus
ENSFALG00000005006	ZC3HC1	100	60.426	ENSLAFG00000001292	ZC3HC1	90	60.426	Loxodonta_africana
ENSFALG00000005006	ZC3HC1	100	60.470	ENSMFAG00000030176	ZC3HC1	97	59.188	Macaca_fascicularis
ENSFALG00000005006	ZC3HC1	100	59.402	ENSMMUG00000006155	ZC3HC1	99	58.777	Macaca_mulatta
ENSFALG00000005006	ZC3HC1	100	60.684	ENSMNEG00000011833	ZC3HC1	97	59.402	Macaca_nemestrina
ENSFALG00000005006	ZC3HC1	100	60.684	ENSMLEG00000027328	ZC3HC1	98	59.259	Mandrillus_leucophaeus
ENSFALG00000005006	ZC3HC1	94	41.850	ENSMAMG00000010691	zc3hc1	86	41.850	Mastacembelus_armatus
ENSFALG00000005006	ZC3HC1	94	42.129	ENSMZEG00005007142	zc3hc1	86	42.163	Maylandia_zebra
ENSFALG00000005006	ZC3HC1	100	71.150	ENSMGAG00000002977	ZC3HC1	91	71.922	Meleagris_gallopavo
ENSFALG00000005006	ZC3HC1	90	53.396	ENSMAUG00000017032	Zc3hc1	92	53.396	Mesocricetus_auratus
ENSFALG00000005006	ZC3HC1	100	61.111	ENSMICG00000009167	ZC3HC1	90	61.111	Microcebus_murinus
ENSFALG00000005006	ZC3HC1	100	60.600	ENSMOCG00000015239	Zc3hc1	90	60.600	Microtus_ochrogaster
ENSFALG00000005006	ZC3HC1	95	40.523	ENSMMOG00000002204	zc3hc1	99	40.305	Mola_mola
ENSFALG00000005006	ZC3HC1	100	51.029	ENSMODG00000014630	ZC3HC1	90	51.029	Monodelphis_domestica
ENSFALG00000005006	ZC3HC1	94	42.222	ENSMALG00000014447	zc3hc1	86	42.384	Monopterus_albus
ENSFALG00000005006	ZC3HC1	100	57.479	MGP_CAROLIEiJ_G0028183	Zc3hc1	90	57.479	Mus_caroli
ENSFALG00000005006	ZC3HC1	100	57.051	ENSMUSG00000039130	Zc3hc1	90	57.051	Mus_musculus
ENSFALG00000005006	ZC3HC1	100	52.778	MGP_PahariEiJ_G0021941	Zc3hc1	90	52.778	Mus_pahari
ENSFALG00000005006	ZC3HC1	100	56.838	MGP_SPRETEiJ_G0029183	Zc3hc1	90	56.838	Mus_spretus
ENSFALG00000005006	ZC3HC1	95	58.333	ENSMPUG00000005297	ZC3HC1	87	57.395	Mustela_putorius_furo
ENSFALG00000005006	ZC3HC1	74	52.586	ENSMLUG00000029228	-	99	52.841	Myotis_lucifugus
ENSFALG00000005006	ZC3HC1	100	59.052	ENSMLUG00000000063	-	90	59.829	Myotis_lucifugus
ENSFALG00000005006	ZC3HC1	100	58.547	ENSNGAG00000019014	Zc3hc1	90	58.547	Nannospalax_galili
ENSFALG00000005006	ZC3HC1	94	42.350	ENSNBRG00000004577	zc3hc1	86	42.605	Neolamprologus_brichardi
ENSFALG00000005006	ZC3HC1	99	61.075	ENSNLEG00000012698	ZC3HC1	97	60.054	Nomascus_leucogenys
ENSFALG00000005006	ZC3HC1	100	61.325	ENSMEUG00000011023	ZC3HC1	90	61.325	Notamacropus_eugenii
ENSFALG00000005006	ZC3HC1	62	62.150	ENSOPRG00000007867	-	56	62.150	Ochotona_princeps
ENSFALG00000005006	ZC3HC1	100	57.906	ENSODEG00000014604	ZC3HC1	88	59.933	Octodon_degus
ENSFALG00000005006	ZC3HC1	94	42.350	ENSONIG00000011644	zc3hc1	86	42.384	Oreochromis_niloticus
ENSFALG00000005006	ZC3HC1	100	54.777	ENSOANG00000011460	ZC3HC1	100	54.777	Ornithorhynchus_anatinus
ENSFALG00000005006	ZC3HC1	100	58.761	ENSOCUG00000017137	ZC3HC1	90	58.761	Oryctolagus_cuniculus
ENSFALG00000005006	ZC3HC1	94	43.805	ENSORLG00000014409	zc3hc1	85	43.805	Oryzias_latipes
ENSFALG00000005006	ZC3HC1	94	44.027	ENSORLG00020015874	zc3hc1	85	44.027	Oryzias_latipes_hni
ENSFALG00000005006	ZC3HC1	94	44.027	ENSORLG00015014641	zc3hc1	85	44.027	Oryzias_latipes_hsok
ENSFALG00000005006	ZC3HC1	94	46.453	ENSOMEG00000000215	zc3hc1	86	46.380	Oryzias_melastigma
ENSFALG00000005006	ZC3HC1	94	45.538	ENSOMEG00000020604	zc3hc1	86	45.475	Oryzias_melastigma
ENSFALG00000005006	ZC3HC1	100	55.128	ENSOGAG00000026193	ZC3HC1	90	55.128	Otolemur_garnettii
ENSFALG00000005006	ZC3HC1	100	59.402	ENSOARG00000004907	ZC3HC1	89	59.402	Ovis_aries
ENSFALG00000005006	ZC3HC1	99	60.860	ENSPPAG00000043172	ZC3HC1	94	60.860	Pan_paniscus
ENSFALG00000005006	ZC3HC1	99	59.570	ENSPPRG00000001004	ZC3HC1	95	58.495	Panthera_pardus
ENSFALG00000005006	ZC3HC1	100	60.043	ENSPTIG00000007823	ZC3HC1	96	58.974	Panthera_tigris_altaica
ENSFALG00000005006	ZC3HC1	99	60.860	ENSPTRG00000019685	ZC3HC1	94	60.860	Pan_troglodytes
ENSFALG00000005006	ZC3HC1	100	59.402	ENSPANG00000014229	ZC3HC1	97	59.188	Papio_anubis
ENSFALG00000005006	ZC3HC1	97	45.556	ENSPKIG00000007172	zc3hc1	89	45.556	Paramormyrops_kingsleyae
ENSFALG00000005006	ZC3HC1	100	60.600	ENSPSIG00000016646	ZC3HC1	91	61.325	Pelodiscus_sinensis
ENSFALG00000005006	ZC3HC1	91	39.770	ENSPMGG00000003548	zc3hc1	89	39.211	Periophthalmus_magnuspinnatus
ENSFALG00000005006	ZC3HC1	100	56.624	ENSPEMG00000000514	Zc3hc1	90	57.692	Peromyscus_maniculatus_bairdii
ENSFALG00000005006	ZC3HC1	100	59.188	ENSPCIG00000020619	ZC3HC1	100	61.596	Phascolarctos_cinereus
ENSFALG00000005006	ZC3HC1	95	41.886	ENSPFOG00000003466	zc3hc1	87	41.886	Poecilia_formosa
ENSFALG00000005006	ZC3HC1	95	41.886	ENSPLAG00000022211	zc3hc1	87	41.886	Poecilia_latipinna
ENSFALG00000005006	ZC3HC1	95	41.886	ENSPMEG00000001458	zc3hc1	90	41.972	Poecilia_mexicana
ENSFALG00000005006	ZC3HC1	95	41.886	ENSPREG00000004004	zc3hc1	87	41.886	Poecilia_reticulata
ENSFALG00000005006	ZC3HC1	99	54.390	ENSPPYG00000017998	ZC3HC1	90	54.390	Pongo_abelii
ENSFALG00000005006	ZC3HC1	100	59.615	ENSPCAG00000001182	ZC3HC1	98	59.615	Procavia_capensis
ENSFALG00000005006	ZC3HC1	100	59.829	ENSPCOG00000017354	ZC3HC1	96	55.128	Propithecus_coquereli
ENSFALG00000005006	ZC3HC1	100	56.838	ENSPVAG00000003195	ZC3HC1	90	56.476	Pteropus_vampyrus
ENSFALG00000005006	ZC3HC1	94	42.129	ENSPNYG00000020692	zc3hc1	86	42.163	Pundamilia_nyererei
ENSFALG00000005006	ZC3HC1	94	40.674	ENSPNAG00000020746	zc3hc1	87	40.583	Pygocentrus_nattereri
ENSFALG00000005006	ZC3HC1	100	57.602	ENSRNOG00000010154	Zc3hc1	90	57.602	Rattus_norvegicus
ENSFALG00000005006	ZC3HC1	100	60.897	ENSRBIG00000029409	ZC3HC1	100	60.897	Rhinopithecus_bieti
ENSFALG00000005006	ZC3HC1	100	60.897	ENSRROG00000041831	ZC3HC1	99	58.701	Rhinopithecus_roxellana
ENSFALG00000005006	ZC3HC1	88	63.158	ENSSBOG00000032787	ZC3HC1	92	61.000	Saimiri_boliviensis_boliviensis
ENSFALG00000005006	ZC3HC1	100	61.111	ENSSHAG00000002529	ZC3HC1	98	61.111	Sarcophilus_harrisii
ENSFALG00000005006	ZC3HC1	99	48.060	ENSSFOG00015003667	zc3hc1	83	47.577	Scleropages_formosus
ENSFALG00000005006	ZC3HC1	94	42.257	ENSSMAG00000000647	zc3hc1	77	43.237	Scophthalmus_maximus
ENSFALG00000005006	ZC3HC1	94	41.850	ENSSDUG00000004241	zc3hc1	84	41.850	Seriola_dumerili
ENSFALG00000005006	ZC3HC1	94	42.070	ENSSLDG00000025056	zc3hc1	84	42.070	Seriola_lalandi_dorsalis
ENSFALG00000005006	ZC3HC1	100	54.060	ENSSARG00000012013	ZC3HC1	90	53.419	Sorex_araneus
ENSFALG00000005006	ZC3HC1	93	56.381	ENSSPUG00000000778	ZC3HC1	84	56.381	Sphenodon_punctatus
ENSFALG00000005006	ZC3HC1	94	42.358	ENSSPAG00000020041	zc3hc1	86	42.358	Stegastes_partitus
ENSFALG00000005006	ZC3HC1	100	60.730	ENSSSCG00000016565	ZC3HC1	100	60.401	Sus_scrofa
ENSFALG00000005006	ZC3HC1	53	86.475	ENSTGUG00000016262	ZC3HC1	100	86.475	Taeniopygia_guttata
ENSFALG00000005006	ZC3HC1	95	42.105	ENSTRUG00000020077	zc3hc1	87	42.013	Takifugu_rubripes
ENSFALG00000005006	ZC3HC1	95	41.921	ENSTNIG00000007585	zc3hc1	90	41.943	Tetraodon_nigroviridis
ENSFALG00000005006	ZC3HC1	79	58.556	ENSTBEG00000005216	ZC3HC1	72	58.556	Tupaia_belangeri
ENSFALG00000005006	ZC3HC1	100	60.256	ENSTTRG00000008458	ZC3HC1	95	60.256	Tursiops_truncatus
ENSFALG00000005006	ZC3HC1	100	60.043	ENSUAMG00000020249	ZC3HC1	90	60.043	Ursus_americanus
ENSFALG00000005006	ZC3HC1	100	60.256	ENSUMAG00000009268	ZC3HC1	90	60.256	Ursus_maritimus
ENSFALG00000005006	ZC3HC1	74	58.000	ENSVPAG00000010846	ZC3HC1	67	58.000	Vicugna_pacos
ENSFALG00000005006	ZC3HC1	95	58.784	ENSVVUG00000012386	ZC3HC1	89	58.784	Vulpes_vulpes
ENSFALG00000005006	ZC3HC1	94	50.228	ENSXETG00000033900	zc3hc1	89	50.000	Xenopus_tropicalis
ENSFALG00000005006	ZC3HC1	95	40.919	ENSXCOG00000013570	zc3hc1	92	37.246	Xiphophorus_couchianus
ENSFALG00000005006	ZC3HC1	95	41.886	ENSXMAG00000010979	zc3hc1	94	41.886	Xiphophorus_maculatus