EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000005062 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 2205 bases
Position: chrJH603226.1:1269819-1272023
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005268	RRM_1	PF00076.22	8.7e-24	1	2
ENSFALP00000005268	RRM_1	PF00076.22	8.7e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005294	-	762	-	ENSFALP00000005268	253 (aa)	-	U3JR64

Gene Model

Click here to download ENSFALG00000005062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005062's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005062	-	100	82.213	ENSG00000136450	SRSF1	98	97.857	Homo_sapiens
ENSFALG00000005062	-	76	72.539	ENSAPOG00000002748	-	76	94.340	Acanthochromis_polyacanthus
ENSFALG00000005062	-	78	72.589	ENSAPOG00000008542	-	80	91.228	Acanthochromis_polyacanthus
ENSFALG00000005062	-	78	72.081	ENSAMEG00000002635	SRSF1	80	100.000	Ailuropoda_melanoleuca
ENSFALG00000005062	-	93	66.949	ENSACIG00000008091	srsf1a	77	94.340	Amphilophus_citrinellus
ENSFALG00000005062	-	93	66.949	ENSAOCG00000010671	-	78	94.340	Amphiprion_ocellaris
ENSFALG00000005062	-	78	70.443	ENSAOCG00000000337	-	75	91.228	Amphiprion_ocellaris
ENSFALG00000005062	-	78	70.443	ENSAPEG00000023352	-	74	91.228	Amphiprion_percula
ENSFALG00000005062	-	93	66.949	ENSAPEG00000009915	-	78	94.340	Amphiprion_percula
ENSFALG00000005062	-	80	68.473	ENSATEG00000021567	-	78	87.719	Anabas_testudineus
ENSFALG00000005062	-	76	73.057	ENSATEG00000022403	-	78	94.340	Anabas_testudineus
ENSFALG00000005062	-	97	82.520	ENSACAG00000005542	-	99	82.520	Anolis_carolinensis
ENSFALG00000005062	-	100	82.213	ENSANAG00000020583	-	100	82.213	Aotus_nancymaae
ENSFALG00000005062	-	79	62.000	ENSANAG00000025417	-	88	92.157	Aotus_nancymaae
ENSFALG00000005062	-	96	78.629	ENSAMXG00000035996	srsf1a	98	78.629	Astyanax_mexicanus
ENSFALG00000005062	-	57	97.931	ENSAMXG00000024373	-	66	97.931	Astyanax_mexicanus
ENSFALG00000005062	-	100	82.213	ENSBTAG00000014766	SRSF1	100	82.213	Bos_taurus
ENSFALG00000005062	-	100	82.213	ENSCJAG00000041713	-	100	82.213	Callithrix_jacchus
ENSFALG00000005062	-	77	71.939	ENSCJAG00000008111	-	88	71.574	Callithrix_jacchus
ENSFALG00000005062	-	100	82.213	ENSCAFG00000017430	SRSF1	100	82.213	Canis_familiaris
ENSFALG00000005062	-	100	82.213	ENSCAFG00020025632	-	100	82.213	Canis_lupus_dingo
ENSFALG00000005062	-	97	81.707	ENSCHIG00000010787	SRSF1	99	81.707	Capra_hircus
ENSFALG00000005062	-	100	82.213	ENSTSYG00000013899	-	100	82.213	Carlito_syrichta
ENSFALG00000005062	-	100	82.213	ENSCPOG00000032681	-	100	82.213	Cavia_porcellus
ENSFALG00000005062	-	100	82.213	ENSCCAG00000029484	-	100	82.213	Cebus_capucinus
ENSFALG00000005062	-	100	82.213	ENSCATG00000042294	-	88	98.026	Cercocebus_atys
ENSFALG00000005062	-	100	82.213	ENSCLAG00000014707	-	100	82.213	Chinchilla_lanigera
ENSFALG00000005062	-	100	81.818	ENSCSAG00000005642	-	100	81.818	Chlorocebus_sabaeus
ENSFALG00000005062	-	97	81.707	ENSCHOG00000001899	SRSF1	99	81.707	Choloepus_hoffmanni
ENSFALG00000005062	-	100	83.399	ENSCPBG00000009851	-	100	83.399	Chrysemys_picta_bellii
ENSFALG00000005062	-	100	82.213	ENSCANG00000029726	-	100	82.213	Colobus_angolensis_palliatus
ENSFALG00000005062	-	100	82.213	ENSCGRG00001000670	Srsf1	100	82.213	Cricetulus_griseus_chok1gshd
ENSFALG00000005062	-	100	82.213	ENSCGRG00000005590	Srsf1	100	82.213	Cricetulus_griseus_crigri
ENSFALG00000005062	-	78	66.197	ENSCSEG00000009973	-	73	92.982	Cynoglossus_semilaevis
ENSFALG00000005062	-	76	75.130	ENSCSEG00000014272	-	78	94.340	Cynoglossus_semilaevis
ENSFALG00000005062	-	76	73.057	ENSCVAG00000018617	-	78	94.340	Cyprinodon_variegatus
ENSFALG00000005062	-	76	69.231	ENSCVAG00000005458	-	74	86.567	Cyprinodon_variegatus
ENSFALG00000005062	-	96	77.866	ENSDARG00000057691	srsf1a	98	77.866	Danio_rerio
ENSFALG00000005062	-	96	81.070	ENSDARG00000017843	srsf1b	98	81.070	Danio_rerio
ENSFALG00000005062	-	100	82.213	ENSDNOG00000011737	-	100	82.213	Dasypus_novemcinctus
ENSFALG00000005062	-	100	82.213	ENSDORG00000015082	Srsf1	100	82.213	Dipodomys_ordii
ENSFALG00000005062	-	73	75.000	ENSETEG00000005349	-	63	75.000	Echinops_telfairi
ENSFALG00000005062	-	100	82.213	ENSEASG00005002922	-	100	82.213	Equus_asinus_asinus
ENSFALG00000005062	-	97	81.707	ENSECAG00000016654	SRSF1	99	81.707	Equus_caballus
ENSFALG00000005062	-	73	75.543	ENSEEUG00000009255	-	63	75.543	Erinaceus_europaeus
ENSFALG00000005062	-	77	75.258	ENSELUG00000021646	srsf1a	76	96.296	Esox_lucius
ENSFALG00000005062	-	100	82.213	ENSFCAG00000002250	-	100	82.213	Felis_catus
ENSFALG00000005062	-	100	82.213	ENSFDAG00000010646	-	100	82.213	Fukomys_damarensis
ENSFALG00000005062	-	93	66.949	ENSFHEG00000003174	srsf1a	78	94.340	Fundulus_heteroclitus
ENSFALG00000005062	-	78	74.000	ENSGMOG00000014787	-	79	94.340	Gadus_morhua
ENSFALG00000005062	-	97	82.927	ENSGALG00000005525	SRSF1	99	82.927	Gallus_gallus
ENSFALG00000005062	-	78	70.854	ENSGACG00000020621	srsf1b	80	91.228	Gasterosteus_aculeatus
ENSFALG00000005062	-	100	83.399	ENSGAGG00000022965	-	100	83.399	Gopherus_agassizii
ENSFALG00000005062	-	100	82.213	ENSGGOG00000004386	SRSF1	88	98.026	Gorilla_gorilla
ENSFALG00000005062	-	95	65.714	ENSHBUG00000016788	srsf1a	78	94.340	Haplochromis_burtoni
ENSFALG00000005062	-	84	78.873	ENSHGLG00000000669	-	99	78.873	Heterocephalus_glaber_female
ENSFALG00000005062	-	84	78.873	ENSHGLG00000000600	-	99	78.873	Heterocephalus_glaber_female
ENSFALG00000005062	-	100	82.213	ENSHGLG00100016906	-	100	82.213	Heterocephalus_glaber_male
ENSFALG00000005062	-	76	71.574	ENSHCOG00000018918	srsf1a	75	92.453	Hippocampus_comes
ENSFALG00000005062	-	97	80.894	ENSIPUG00000008750	srsf1b	99	80.894	Ictalurus_punctatus
ENSFALG00000005062	-	96	78.226	ENSIPUG00000017039	srsf1a	98	78.226	Ictalurus_punctatus
ENSFALG00000005062	-	100	82.213	ENSSTOG00000000243	-	100	82.213	Ictidomys_tridecemlineatus
ENSFALG00000005062	-	100	82.213	ENSJJAG00000000102	-	100	82.213	Jaculus_jaculus
ENSFALG00000005062	-	50	64.567	ENSJJAG00000014464	-	95	64.567	Jaculus_jaculus
ENSFALG00000005062	-	76	73.057	ENSKMAG00000019232	srsf1a	76	94.340	Kryptolebias_marmoratus
ENSFALG00000005062	-	78	67.000	ENSLBEG00000015294	-	75	87.218	Labrus_bergylta
ENSFALG00000005062	-	93	67.797	ENSLBEG00000020864	-	78	94.340	Labrus_bergylta
ENSFALG00000005062	-	77	74.742	ENSLACG00000014160	srsf1a	71	100.000	Latimeria_chalumnae
ENSFALG00000005062	-	97	81.707	ENSLOCG00000005994	srsf1a	99	81.707	Lepisosteus_oculatus
ENSFALG00000005062	-	97	81.707	ENSLAFG00000025743	SRSF1	99	81.707	Loxodonta_africana
ENSFALG00000005062	-	100	82.213	ENSMFAG00000040003	-	88	98.026	Macaca_fascicularis
ENSFALG00000005062	-	100	81.423	ENSMMUG00000003260	-	100	81.423	Macaca_mulatta
ENSFALG00000005062	-	100	82.213	ENSMMUG00000004725	SRSF1	100	82.213	Macaca_mulatta
ENSFALG00000005062	-	100	81.423	ENSMNEG00000015983	-	88	96.711	Macaca_nemestrina
ENSFALG00000005062	-	100	82.213	ENSMNEG00000027680	-	88	98.026	Macaca_nemestrina
ENSFALG00000005062	-	97	81.707	ENSMLEG00000040509	SRSF1	99	81.707	Mandrillus_leucophaeus
ENSFALG00000005062	-	100	77.470	ENSMLEG00000015243	-	79	96.491	Mandrillus_leucophaeus
ENSFALG00000005062	-	78	73.604	ENSMAMG00000019691	-	77	94.737	Mastacembelus_armatus
ENSFALG00000005062	-	78	70.558	ENSMAMG00000019687	-	79	87.719	Mastacembelus_armatus
ENSFALG00000005062	-	76	73.057	ENSMAMG00000018454	-	78	94.340	Mastacembelus_armatus
ENSFALG00000005062	-	100	82.213	ENSMAUG00000021845	Srsf1	100	82.213	Mesocricetus_auratus
ENSFALG00000005062	-	100	82.213	ENSMICG00000013639	-	88	98.026	Microcebus_murinus
ENSFALG00000005062	-	100	82.213	ENSMOCG00000001996	Srsf1	100	82.213	Microtus_ochrogaster
ENSFALG00000005062	-	93	67.797	ENSMMOG00000014354	srsf1a	76	94.340	Mola_mola
ENSFALG00000005062	-	73	75.676	ENSMODG00000014781	-	63	75.676	Monodelphis_domestica
ENSFALG00000005062	-	76	72.539	ENSMALG00000017129	-	54	95.238	Monopterus_albus
ENSFALG00000005062	-	53	97.143	ENSMALG00000007763	-	60	95.775	Monopterus_albus
ENSFALG00000005062	-	100	82.213	MGP_CAROLIEiJ_G0016943	Srsf1	100	82.213	Mus_caroli
ENSFALG00000005062	-	100	82.213	ENSMUSG00000018379	Srsf1	100	82.213	Mus_musculus
ENSFALG00000005062	-	100	82.213	MGP_PahariEiJ_G0018074	Srsf1	100	82.213	Mus_pahari
ENSFALG00000005062	-	100	82.213	MGP_SPRETEiJ_G0017790	Srsf1	100	82.213	Mus_spretus
ENSFALG00000005062	-	97	81.707	ENSMPUG00000015369	SRSF1	99	81.707	Mustela_putorius_furo
ENSFALG00000005062	-	80	71.429	ENSMLUG00000023995	-	81	94.203	Myotis_lucifugus
ENSFALG00000005062	-	97	81.707	ENSMLUG00000011040	SRSF1	99	81.707	Myotis_lucifugus
ENSFALG00000005062	-	97	81.707	ENSNGAG00000011395	Srsf1	99	81.707	Nannospalax_galili
ENSFALG00000005062	-	97	65.447	ENSNBRG00000008041	srsf1b	57	91.228	Neolamprologus_brichardi
ENSFALG00000005062	-	100	82.213	ENSNLEG00000008088	-	88	98.026	Nomascus_leucogenys
ENSFALG00000005062	-	50	65.354	ENSMEUG00000002783	-	100	65.354	Notamacropus_eugenii
ENSFALG00000005062	-	57	97.931	ENSOPRG00000001234	-	79	97.931	Ochotona_princeps
ENSFALG00000005062	-	100	81.423	ENSODEG00000011481	-	100	81.423	Octodon_degus
ENSFALG00000005062	-	79	74.000	ENSONIG00000004860	-	58	96.429	Oreochromis_niloticus
ENSFALG00000005062	-	76	73.057	ENSONIG00000013160	-	77	94.340	Oreochromis_niloticus
ENSFALG00000005062	-	96	59.677	ENSOCUG00000010894	-	56	83.750	Oryctolagus_cuniculus
ENSFALG00000005062	-	76	73.057	ENSORLG00000004580	srsf1a	78	94.340	Oryzias_latipes
ENSFALG00000005062	-	93	66.949	ENSORLG00020009456	srsf1a	78	94.340	Oryzias_latipes_hni
ENSFALG00000005062	-	93	66.949	ENSORLG00015014384	srsf1a	78	94.340	Oryzias_latipes_hsok
ENSFALG00000005062	-	70	69.318	ENSOMEG00000004106	srsf1a	71	86.111	Oryzias_melastigma
ENSFALG00000005062	-	97	81.707	ENSOGAG00000025950	-	99	81.707	Otolemur_garnettii
ENSFALG00000005062	-	78	71.066	ENSOARG00000008323	SRSF1	81	98.246	Ovis_aries
ENSFALG00000005062	-	100	82.213	ENSPPAG00000043403	-	88	98.026	Pan_paniscus
ENSFALG00000005062	-	100	82.213	ENSPPRG00000004238	-	100	82.213	Panthera_pardus
ENSFALG00000005062	-	100	82.213	ENSPTRG00000049077	SRSF1	88	98.026	Pan_troglodytes
ENSFALG00000005062	-	100	73.913	ENSPANG00000030275	-	100	73.913	Papio_anubis
ENSFALG00000005062	-	100	82.213	ENSPANG00000022305	-	88	98.026	Papio_anubis
ENSFALG00000005062	-	96	80.165	ENSPKIG00000007204	srsf1a	98	80.165	Paramormyrops_kingsleyae
ENSFALG00000005062	-	97	81.301	ENSPKIG00000012857	srsf1b	99	81.301	Paramormyrops_kingsleyae
ENSFALG00000005062	-	97	79.839	ENSPSIG00000009000	-	99	79.839	Pelodiscus_sinensis
ENSFALG00000005062	-	93	65.678	ENSPMGG00000013112	-	78	94.340	Periophthalmus_magnuspinnatus
ENSFALG00000005062	-	94	71.130	ENSPMGG00000005467	-	78	91.729	Periophthalmus_magnuspinnatus
ENSFALG00000005062	-	100	82.213	ENSPEMG00000021416	Srsf1	100	82.213	Peromyscus_maniculatus_bairdii
ENSFALG00000005062	-	97	81.781	ENSPCIG00000006076	-	99	81.781	Phascolarctos_cinereus
ENSFALG00000005062	-	78	69.697	ENSPFOG00000018325	-	66	85.821	Poecilia_formosa
ENSFALG00000005062	-	78	69.697	ENSPLAG00000008416	srsf1b	75	85.821	Poecilia_latipinna
ENSFALG00000005062	-	78	69.697	ENSPMEG00000002388	-	75	85.821	Poecilia_mexicana
ENSFALG00000005062	-	76	73.057	ENSPREG00000009667	srsf1a	78	94.340	Poecilia_reticulata
ENSFALG00000005062	-	100	82.213	ENSPPYG00000008240	SRSF1	100	82.213	Pongo_abelii
ENSFALG00000005062	-	97	81.707	ENSPCAG00000005199	SRSF1	99	81.707	Procavia_capensis
ENSFALG00000005062	-	100	82.213	ENSPCOG00000023654	-	88	98.026	Propithecus_coquereli
ENSFALG00000005062	-	79	65.500	ENSPCOG00000025736	-	70	89.474	Propithecus_coquereli
ENSFALG00000005062	-	97	71.545	ENSPVAG00000000519	-	99	71.545	Pteropus_vampyrus
ENSFALG00000005062	-	97	80.894	ENSPNAG00000014601	srsf1b	99	80.894	Pygocentrus_nattereri
ENSFALG00000005062	-	92	77.778	ENSPNAG00000022241	srsf1a	77	96.992	Pygocentrus_nattereri
ENSFALG00000005062	-	97	81.707	ENSRNOG00000050323	Srsf1	99	81.707	Rattus_norvegicus
ENSFALG00000005062	-	100	82.213	ENSRBIG00000034445	-	88	98.026	Rhinopithecus_bieti
ENSFALG00000005062	-	100	82.213	ENSRROG00000041506	-	88	98.026	Rhinopithecus_roxellana
ENSFALG00000005062	-	100	82.213	ENSSBOG00000025377	-	100	82.213	Saimiri_boliviensis_boliviensis
ENSFALG00000005062	-	97	81.781	ENSSHAG00000002552	-	99	81.781	Sarcophilus_harrisii
ENSFALG00000005062	-	97	81.224	ENSSFOG00015004800	srsf1a	98	81.224	Scleropages_formosus
ENSFALG00000005062	-	76	73.575	ENSSMAG00000007018	-	76	94.340	Scophthalmus_maximus
ENSFALG00000005062	-	78	68.627	ENSSMAG00000009719	-	75	91.852	Scophthalmus_maximus
ENSFALG00000005062	-	97	64.634	ENSSDUG00000003929	-	79	91.228	Seriola_dumerili
ENSFALG00000005062	-	93	67.797	ENSSDUG00000011303	-	78	94.340	Seriola_dumerili
ENSFALG00000005062	-	78	63.636	ENSSLDG00000016868	-	76	89.474	Seriola_lalandi_dorsalis
ENSFALG00000005062	-	76	74.093	ENSSLDG00000010543	-	78	94.340	Seriola_lalandi_dorsalis
ENSFALG00000005062	-	93	59.322	ENSSLDG00000016895	-	76	85.965	Seriola_lalandi_dorsalis
ENSFALG00000005062	-	73	75.543	ENSSARG00000010949	-	63	75.543	Sorex_araneus
ENSFALG00000005062	-	100	83.399	ENSSPUG00000000804	-	100	83.399	Sphenodon_punctatus
ENSFALG00000005062	-	78	67.943	ENSSPAG00000014152	-	72	89.474	Stegastes_partitus
ENSFALG00000005062	-	76	73.575	ENSSPAG00000022562	-	77	94.340	Stegastes_partitus
ENSFALG00000005062	-	100	82.213	ENSSSCG00000017626	-	100	82.213	Sus_scrofa
ENSFALG00000005062	-	57	100.000	ENSTGUG00000008416	-	79	100.000	Taeniopygia_guttata
ENSFALG00000005062	-	76	72.539	ENSTRUG00000003691	srsf1a	78	94.340	Takifugu_rubripes
ENSFALG00000005062	-	76	72.539	ENSTNIG00000016223	srsf1a	77	94.340	Tetraodon_nigroviridis
ENSFALG00000005062	-	73	73.913	ENSTBEG00000015378	-	63	73.913	Tupaia_belangeri
ENSFALG00000005062	-	57	97.931	ENSTTRG00000007310	SRSF1	79	97.931	Tursiops_truncatus
ENSFALG00000005062	-	97	81.707	ENSUAMG00000009858	SRSF1	99	81.707	Ursus_americanus
ENSFALG00000005062	-	100	82.213	ENSUMAG00000000455	-	100	82.213	Ursus_maritimus
ENSFALG00000005062	-	97	81.301	ENSVPAG00000010094	SRSF1	99	81.301	Vicugna_pacos
ENSFALG00000005062	-	100	82.213	ENSVVUG00000011882	-	100	82.213	Vulpes_vulpes
ENSFALG00000005062	-	97	82.114	ENSXETG00000008954	srsf1	99	76.604	Xenopus_tropicalis
ENSFALG00000005062	-	76	73.057	ENSXMAG00000011766	srsf1a	78	94.340	Xiphophorus_maculatus