EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000005098 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 17323 bases
Position: chrJH603186.1:1753325-1770647
Accession: 101814351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005300	RRM_1	PF00076.22	4.9e-34	1	2
ENSFALP00000005300	RRM_1	PF00076.22	4.9e-34	2	2
ENSFALP00000005300	RRM_3	PF08777.11	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005326	-	4331	-	ENSFALP00000005300	277 (aa)	XP_005047256	U3JR96

Gene Model

Click here to download ENSFALG00000005098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000005098	-	63	67.797	ENSFALG00000004979	SRSF5	67	70.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005098	-	64	76.087	ENSAPOG00000017395	srsf5a	62	77.717	Acanthochromis_polyacanthus
ENSFALG00000005098	-	64	73.295	ENSACIG00000011892	srsf5a	96	70.896	Amphilophus_citrinellus
ENSFALG00000005098	-	64	74.863	ENSAOCG00000014967	srsf5a	62	77.596	Amphiprion_ocellaris
ENSFALG00000005098	-	64	74.863	ENSAPEG00000009297	srsf5a	62	77.596	Amphiprion_percula
ENSFALG00000005098	-	64	76.471	ENSATEG00000000198	srsf5a	65	77.540	Anabas_testudineus
ENSFALG00000005098	-	64	97.191	ENSAPLG00000002469	-	70	97.207	Anas_platyrhynchos
ENSFALG00000005098	-	64	85.393	ENSACAG00000029015	-	68	85.955	Anolis_carolinensis
ENSFALG00000005098	-	64	72.775	ENSACLG00000027166	srsf5a	65	73.298	Astatotilapia_calliptera
ENSFALG00000005098	-	64	79.459	ENSAMXG00000030476	srsf5a	67	79.459	Astyanax_mexicanus
ENSFALG00000005098	-	90	76.494	ENSCPBG00000021518	-	70	88.268	Chrysemys_picta_bellii
ENSFALG00000005098	-	64	53.571	ENSCSAVG00000011376	-	78	54.082	Ciona_savignyi
ENSFALG00000005098	-	64	70.984	ENSCSEG00000008109	srsf5a	62	73.575	Cynoglossus_semilaevis
ENSFALG00000005098	-	62	68.617	ENSCVAG00000016982	srsf5a	97	65.672	Cyprinodon_variegatus
ENSFALG00000005098	-	65	78.723	ENSDARG00000029818	srsf5a	100	74.436	Danio_rerio
ENSFALG00000005098	-	64	71.023	ENSFHEG00000003955	srsf5a	97	62.759	Fundulus_heteroclitus
ENSFALG00000005098	-	64	77.401	ENSGMOG00000000869	srsf5a	94	76.271	Gadus_morhua
ENSFALG00000005098	-	100	96.416	ENSGALG00000033259	SRSF5A	100	96.416	Gallus_gallus
ENSFALG00000005098	-	64	69.886	ENSGAFG00000018237	srsf5a	60	61.261	Gambusia_affinis
ENSFALG00000005098	-	64	77.528	ENSGACG00000011761	srsf5a	70	76.111	Gasterosteus_aculeatus
ENSFALG00000005098	-	90	76.494	ENSGAGG00000007312	-	70	88.268	Gopherus_agassizii
ENSFALG00000005098	-	64	73.158	ENSHBUG00000014048	srsf5a	64	73.684	Haplochromis_burtoni
ENSFALG00000005098	-	64	75.806	ENSHCOG00000017557	srsf5a	62	74.074	Hippocampus_comes
ENSFALG00000005098	-	99	66.207	ENSIPUG00000003439	srsf5a	69	75.789	Ictalurus_punctatus
ENSFALG00000005098	-	64	70.745	ENSKMAG00000014937	srsf5a	58	71.429	Kryptolebias_marmoratus
ENSFALG00000005098	-	64	71.282	ENSLBEG00000017153	srsf5a	83	69.683	Labrus_bergylta
ENSFALG00000005098	-	85	74.895	ENSLACG00000017874	-	70	81.111	Latimeria_chalumnae
ENSFALG00000005098	-	64	81.081	ENSLOCG00000014075	srsf5a	61	80.541	Lepisosteus_oculatus
ENSFALG00000005098	-	64	79.121	ENSMAMG00000000192	srsf5a	65	79.006	Mastacembelus_armatus
ENSFALG00000005098	-	64	73.158	ENSMZEG00005010485	srsf5a	64	73.684	Maylandia_zebra
ENSFALG00000005098	-	90	91.968	ENSMGAG00000011888	-	96	98.734	Meleagris_gallopavo
ENSFALG00000005098	-	64	79.444	ENSMMOG00000009793	srsf5a	61	80.000	Mola_mola
ENSFALG00000005098	-	64	77.273	ENSMALG00000021194	srsf5a	63	76.705	Monopterus_albus
ENSFALG00000005098	-	64	73.545	ENSNBRG00000000771	srsf5a	64	74.074	Neolamprologus_brichardi
ENSFALG00000005098	-	64	73.545	ENSONIG00000019583	srsf5a	64	74.074	Oreochromis_niloticus
ENSFALG00000005098	-	67	70.707	ENSORLG00000009268	srsf5a	67	76.796	Oryzias_latipes
ENSFALG00000005098	-	65	72.775	ENSORLG00020003281	srsf5	67	76.796	Oryzias_latipes_hni
ENSFALG00000005098	-	65	72.775	ENSORLG00015023075	srsf5	67	76.796	Oryzias_latipes_hsok
ENSFALG00000005098	-	64	77.222	ENSOMEG00000000628	srsf5a	66	77.778	Oryzias_melastigma
ENSFALG00000005098	-	64	78.495	ENSPKIG00000002054	srsf5a	68	77.419	Paramormyrops_kingsleyae
ENSFALG00000005098	-	91	77.075	ENSPSIG00000008238	-	69	89.266	Pelodiscus_sinensis
ENSFALG00000005098	-	64	73.913	ENSPMGG00000020125	srsf5a	66	68.018	Periophthalmus_magnuspinnatus
ENSFALG00000005098	-	64	70.157	ENSPFOG00000022993	srsf5a	72	71.616	Poecilia_formosa
ENSFALG00000005098	-	63	70.000	ENSPLAG00000005508	srsf5a	71	71.491	Poecilia_latipinna
ENSFALG00000005098	-	64	70.157	ENSPMEG00000016339	srsf5a	65	62.447	Poecilia_mexicana
ENSFALG00000005098	-	64	69.792	ENSPREG00000018091	srsf5a	66	62.185	Poecilia_reticulata
ENSFALG00000005098	-	64	73.158	ENSPNYG00000021245	srsf5a	64	73.684	Pundamilia_nyererei
ENSFALG00000005098	-	64	79.348	ENSPNAG00000021333	srsf5a	66	79.348	Pygocentrus_nattereri
ENSFALG00000005098	-	64	79.032	ENSSFOG00015008377	srsf5	66	77.957	Scleropages_formosus
ENSFALG00000005098	-	64	70.500	ENSSMAG00000010899	srsf5a	66	70.000	Scophthalmus_maximus
ENSFALG00000005098	-	64	75.824	ENSSDUG00000006103	srsf5a	63	79.670	Seriola_dumerili
ENSFALG00000005098	-	64	75.824	ENSSLDG00000004146	srsf5a	63	79.670	Seriola_lalandi_dorsalis
ENSFALG00000005098	-	95	71.805	ENSSPUG00000002052	-	68	84.270	Sphenodon_punctatus
ENSFALG00000005098	-	64	75.410	ENSSPAG00000002821	srsf5a	63	78.142	Stegastes_partitus
ENSFALG00000005098	-	93	99.612	ENSTGUG00000011492	-	100	99.612	Taeniopygia_guttata
ENSFALG00000005098	-	64	72.396	ENSTRUG00000022908	srsf5a	65	74.479	Takifugu_rubripes
ENSFALG00000005098	-	99	66.323	ENSXETG00000017937	srsf5a	72	77.660	Xenopus_tropicalis
ENSFALG00000005098	-	64	69.519	ENSXCOG00000015338	srsf5a	65	63.877	Xiphophorus_couchianus
ENSFALG00000005098	-	64	69.430	ENSXMAG00000012823	srsf5a	87	66.423	Xiphophorus_maculatus