EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000005155 (Gene tree)
Gene ID: -
Gene Symbol: DDX52
Alias: ROK1
Full Name: DExD-box helicase 52
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 7261 bases
Position: chrJH603226.1:1367455-1374715
Accession: 101820888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005392	ResIII	PF04851.15	3.5e-06	1	1
ENSFALP00000005395	ResIII	PF04851.15	4.2e-06	1	1
ENSFALP00000005395	DEAD	PF00270.29	4.6e-39	1	1
ENSFALP00000005392	DEAD	PF00270.29	7.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005421	DDX52-202	3607	-	ENSFALP00000005395	603 (aa)	-	U3JRJ1
ENSFALT00000005418	DDX52-201	3643	-	ENSFALP00000005392	615 (aa)	XP_005056656	U3JRI8

Gene Model

Click here to download ENSFALG00000005155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000005155	DDX52	60	32.143	ENSFALG00000008230	EIF4A2	87	31.856
ENSFALG00000005155	DDX52	68	34.053	ENSFALG00000007042	-	57	34.606
ENSFALG00000005155	DDX52	56	30.199	ENSFALG00000002343	EIF4A3	95	30.199
ENSFALG00000005155	DDX52	67	32.143	ENSFALG00000008731	DDX41	66	32.143
ENSFALG00000005155	DDX52	66	32.117	ENSFALG00000010910	DDX4	54	32.108
ENSFALG00000005155	DDX52	59	31.111	ENSFALG00000011391	DDX47	82	30.412
ENSFALG00000005155	DDX52	65	31.683	ENSFALG00000013672	DDX18	55	31.854
ENSFALG00000005155	DDX52	71	30.594	ENSFALG00000002317	DDX5	69	30.682
ENSFALG00000005155	DDX52	63	30.392	ENSFALG00000009300	DDX55	66	30.467
ENSFALG00000005155	DDX52	67	30.095	ENSFALG00000001530	-	71	30.569
ENSFALG00000005155	DDX52	72	30.591	ENSFALG00000000133	DDX23	52	31.207
ENSFALG00000005155	DDX52	71	30.575	ENSFALG00000012560	DDX17	57	30.575
ENSFALG00000005155	DDX52	70	32.944	ENSFALG00000002703	DDX59	65	33.412
ENSFALG00000005155	DDX52	62	30.026	ENSFALG00000009831	DDX6	76	30.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005155	DDX52	98	72.120	ENSG00000278053	DDX52	98	72.542	Homo_sapiens
ENSFALG00000005155	DDX52	97	60.454	ENSAPOG00000008759	ddx52	87	61.311	Acanthochromis_polyacanthus
ENSFALG00000005155	DDX52	98	72.546	ENSAMEG00000013159	DDX52	98	73.266	Ailuropoda_melanoleuca
ENSFALG00000005155	DDX52	90	63.506	ENSACIG00000002843	ddx52	99	63.864	Amphilophus_citrinellus
ENSFALG00000005155	DDX52	99	59.905	ENSAOCG00000000356	-	87	60.778	Amphiprion_ocellaris
ENSFALG00000005155	DDX52	99	59.905	ENSAOCG00000007983	ddx52	88	60.778	Amphiprion_ocellaris
ENSFALG00000005155	DDX52	99	60.476	ENSAPEG00000023456	ddx52	87	61.426	Amphiprion_percula
ENSFALG00000005155	DDX52	99	59.034	ENSATEG00000021525	ddx52	86	62.167	Anabas_testudineus
ENSFALG00000005155	DDX52	84	75.147	ENSACAG00000006395	DDX52	95	76.829	Anolis_carolinensis
ENSFALG00000005155	DDX52	98	71.953	ENSANAG00000028587	DDX52	98	72.542	Aotus_nancymaae
ENSFALG00000005155	DDX52	97	60.784	ENSACLG00000021447	ddx52	94	61.424	Astatotilapia_calliptera
ENSFALG00000005155	DDX52	94	63.043	ENSAMXG00000024377	ddx52	96	62.791	Astyanax_mexicanus
ENSFALG00000005155	DDX52	98	72.546	ENSBTAG00000010313	DDX52	97	72.529	Bos_taurus
ENSFALG00000005155	DDX52	73	42.511	WBGene00011032	R05D11.4	72	43.119	Caenorhabditis_elegans
ENSFALG00000005155	DDX52	98	72.833	ENSCJAG00000015190	DDX52	98	72.881	Callithrix_jacchus
ENSFALG00000005155	DDX52	98	72.241	ENSCAFG00000013554	-	98	73.005	Canis_familiaris
ENSFALG00000005155	DDX52	98	72.379	ENSCAFG00000018145	-	98	73.232	Canis_familiaris
ENSFALG00000005155	DDX52	95	74.132	ENSCAFG00020003753	DDX52	97	74.221	Canis_lupus_dingo
ENSFALG00000005155	DDX52	97	72.589	ENSCHIG00000006275	DDX52	99	73.162	Capra_hircus
ENSFALG00000005155	DDX52	98	72.120	ENSTSYG00000002996	DDX52	97	73.242	Carlito_syrichta
ENSFALG00000005155	DDX52	90	61.314	ENSCAPG00000010436	DDX52	97	61.852	Cavia_aperea
ENSFALG00000005155	DDX52	97	73.862	ENSCPOG00000001232	DDX52	98	74.188	Cavia_porcellus
ENSFALG00000005155	DDX52	98	72.167	ENSCCAG00000023213	DDX52	98	72.203	Cebus_capucinus
ENSFALG00000005155	DDX52	98	72.167	ENSCATG00000041437	DDX52	98	72.203	Cercocebus_atys
ENSFALG00000005155	DDX52	97	74.237	ENSCLAG00000016292	DDX52	98	74.829	Chinchilla_lanigera
ENSFALG00000005155	DDX52	98	72.093	ENSCSAG00000006122	DDX52	98	72.034	Chlorocebus_sabaeus
ENSFALG00000005155	DDX52	71	80.328	ENSCHOG00000007413	DDX52	70	83.237	Choloepus_hoffmanni
ENSFALG00000005155	DDX52	94	75.333	ENSCPBG00000009806	DDX52	97	74.346	Chrysemys_picta_bellii
ENSFALG00000005155	DDX52	76	51.782	ENSCING00000016218	-	97	52.381	Ciona_intestinalis
ENSFALG00000005155	DDX52	65	55.867	ENSCSAVG00000003835	-	98	55.838	Ciona_savignyi
ENSFALG00000005155	DDX52	98	71.953	ENSCANG00000035140	DDX52	98	72.156	Colobus_angolensis_palliatus
ENSFALG00000005155	DDX52	98	70.744	ENSCGRG00001020695	Ddx52	97	71.765	Cricetulus_griseus_chok1gshd
ENSFALG00000005155	DDX52	98	70.579	ENSCGRG00000008830	Ddx52	97	71.597	Cricetulus_griseus_crigri
ENSFALG00000005155	DDX52	99	59.494	ENSCSEG00000010008	ddx52	90	61.084	Cynoglossus_semilaevis
ENSFALG00000005155	DDX52	94	63.322	ENSCVAG00000005302	ddx52	98	63.448	Cyprinodon_variegatus
ENSFALG00000005155	DDX52	94	65.690	ENSDARG00000100505	ddx52	98	65.050	Danio_rerio
ENSFALG00000005155	DDX52	98	72.559	ENSDNOG00000047454	DDX52	97	73.720	Dasypus_novemcinctus
ENSFALG00000005155	DDX52	97	72.402	ENSDORG00000004276	Ddx52	97	73.529	Dipodomys_ordii
ENSFALG00000005155	DDX52	77	49.580	FBgn0036754	CG5589	75	51.111	Drosophila_melanogaster
ENSFALG00000005155	DDX52	97	66.328	ENSETEG00000016042	DDX52	97	67.462	Echinops_telfairi
ENSFALG00000005155	DDX52	62	41.814	ENSEBUG00000010838	-	91	42.821	Eptatretus_burgeri
ENSFALG00000005155	DDX52	97	72.391	ENSEASG00005011275	DDX52	91	71.880	Equus_asinus_asinus
ENSFALG00000005155	DDX52	98	72.546	ENSECAG00000012286	DDX52	98	72.047	Equus_caballus
ENSFALG00000005155	DDX52	67	68.370	ENSEEUG00000001153	DDX52	68	68.613	Erinaceus_europaeus
ENSFALG00000005155	DDX52	90	61.913	ENSELUG00000018002	ddx52	99	63.028	Esox_lucius
ENSFALG00000005155	DDX52	98	72.910	ENSFCAG00000010573	DDX52	97	73.711	Felis_catus
ENSFALG00000005155	DDX52	98	72.968	ENSFDAG00000008340	-	98	73.175	Fukomys_damarensis
ENSFALG00000005155	DDX52	98	65.289	ENSFDAG00000011133	-	98	65.093	Fukomys_damarensis
ENSFALG00000005155	DDX52	99	58.216	ENSFHEG00000017239	ddx52	90	61.616	Fundulus_heteroclitus
ENSFALG00000005155	DDX52	95	61.498	ENSGMOG00000014879	ddx52	99	61.498	Gadus_morhua
ENSFALG00000005155	DDX52	100	85.526	ENSGALG00000005489	DDX52	100	85.526	Gallus_gallus
ENSFALG00000005155	DDX52	99	60.522	ENSGAFG00000000702	ddx52	94	61.074	Gambusia_affinis
ENSFALG00000005155	DDX52	98	60.899	ENSGACG00000020624	ddx52	99	68.365	Gasterosteus_aculeatus
ENSFALG00000005155	DDX52	100	72.082	ENSGAGG00000007234	DDX52	95	74.380	Gopherus_agassizii
ENSFALG00000005155	DDX52	98	72.287	ENSGGOG00000028224	DDX52	98	72.712	Gorilla_gorilla
ENSFALG00000005155	DDX52	97	59.259	ENSHBUG00000015638	ddx52	89	60.784	Haplochromis_burtoni
ENSFALG00000005155	DDX52	83	62.083	ENSHGLG00000019205	-	93	61.057	Heterocephalus_glaber_female
ENSFALG00000005155	DDX52	95	73.575	ENSHGLG00000006235	-	98	73.748	Heterocephalus_glaber_female
ENSFALG00000005155	DDX52	75	81.057	ENSHGLG00100013765	-	85	81.236	Heterocephalus_glaber_male
ENSFALG00000005155	DDX52	83	62.083	ENSHGLG00100018699	-	94	61.057	Heterocephalus_glaber_male
ENSFALG00000005155	DDX52	99	58.638	ENSHCOG00000007966	ddx52	97	59.932	Hippocampus_comes
ENSFALG00000005155	DDX52	96	61.371	ENSIPUG00000008623	ddx52	98	61.576	Ictalurus_punctatus
ENSFALG00000005155	DDX52	98	71.880	ENSJJAG00000021877	Ddx52	98	72.420	Jaculus_jaculus
ENSFALG00000005155	DDX52	97	61.285	ENSKMAG00000022270	ddx52	96	74.359	Kryptolebias_marmoratus
ENSFALG00000005155	DDX52	99	58.748	ENSLBEG00000015403	ddx52	89	60.535	Labrus_bergylta
ENSFALG00000005155	DDX52	94	69.603	ENSLACG00000012514	DDX52	96	67.966	Latimeria_chalumnae
ENSFALG00000005155	DDX52	74	77.011	ENSLOCG00000005928	ddx52	97	71.000	Lepisosteus_oculatus
ENSFALG00000005155	DDX52	95	67.692	ENSLAFG00000002635	DDX52	99	85.825	Loxodonta_africana
ENSFALG00000005155	DDX52	98	72.167	ENSMFAG00000000640	DDX52	98	72.203	Macaca_fascicularis
ENSFALG00000005155	DDX52	98	72.000	ENSMMUG00000002980	DDX52	98	72.203	Macaca_mulatta
ENSFALG00000005155	DDX52	98	72.000	ENSMNEG00000043658	DDX52	98	72.034	Macaca_nemestrina
ENSFALG00000005155	DDX52	98	71.833	ENSMLEG00000017518	DDX52	98	71.864	Mandrillus_leucophaeus
ENSFALG00000005155	DDX52	95	62.669	ENSMAMG00000019719	ddx52	87	62.162	Mastacembelus_armatus
ENSFALG00000005155	DDX52	97	58.710	ENSMZEG00005019044	ddx52	89	60.393	Maylandia_zebra
ENSFALG00000005155	DDX52	95	85.665	ENSMGAG00000008091	DDX52	100	85.665	Meleagris_gallopavo
ENSFALG00000005155	DDX52	98	71.192	ENSMAUG00000021084	Ddx52	97	71.966	Mesocricetus_auratus
ENSFALG00000005155	DDX52	95	67.591	ENSMICG00000004290	-	99	67.418	Microcebus_murinus
ENSFALG00000005155	DDX52	98	70.978	ENSMOCG00000009654	Ddx52	98	72.128	Microtus_ochrogaster
ENSFALG00000005155	DDX52	97	59.631	ENSMMOG00000018825	ddx52	88	61.257	Mola_mola
ENSFALG00000005155	DDX52	97	71.500	ENSMODG00000002493	DDX52	98	71.808	Monodelphis_domestica
ENSFALG00000005155	DDX52	93	60.213	ENSMALG00000007621	ddx52	80	68.008	Monopterus_albus
ENSFALG00000005155	DDX52	98	72.074	MGP_CAROLIEiJ_G0016888	Ddx52	97	72.222	Mus_caroli
ENSFALG00000005155	DDX52	98	72.241	ENSMUSG00000020677	Ddx52	97	72.559	Mus_musculus
ENSFALG00000005155	DDX52	98	71.736	MGP_PahariEiJ_G0018018	Ddx52	98	73.051	Mus_pahari
ENSFALG00000005155	DDX52	98	72.408	MGP_SPRETEiJ_G0017733	Ddx52	97	72.559	Mus_spretus
ENSFALG00000005155	DDX52	98	72.621	ENSMPUG00000015007	DDX52	97	73.585	Mustela_putorius_furo
ENSFALG00000005155	DDX52	79	81.042	ENSMLUG00000024480	-	98	81.420	Myotis_lucifugus
ENSFALG00000005155	DDX52	98	72.667	ENSMLUG00000007167	-	98	72.559	Myotis_lucifugus
ENSFALG00000005155	DDX52	98	71.953	ENSNGAG00000020686	Ddx52	98	73.024	Nannospalax_galili
ENSFALG00000005155	DDX52	88	62.523	ENSNBRG00000007750	ddx52	98	62.433	Neolamprologus_brichardi
ENSFALG00000005155	DDX52	98	72.074	ENSNLEG00000002826	DDX52	97	73.196	Nomascus_leucogenys
ENSFALG00000005155	DDX52	65	83.376	ENSMEUG00000011234	DDX52	97	84.197	Notamacropus_eugenii
ENSFALG00000005155	DDX52	98	65.058	ENSOPRG00000003899	DDX52	97	66.553	Ochotona_princeps
ENSFALG00000005155	DDX52	96	71.282	ENSODEG00000002857	-	96	72.251	Octodon_degus
ENSFALG00000005155	DDX52	95	69.931	ENSODEG00000012814	-	100	69.931	Octodon_degus
ENSFALG00000005155	DDX52	99	60.256	ENSONIG00000004869	ddx52	96	61.322	Oreochromis_niloticus
ENSFALG00000005155	DDX52	91	72.340	ENSOANG00000007133	DDX52	93	72.085	Ornithorhynchus_anatinus
ENSFALG00000005155	DDX52	97	73.277	ENSOCUG00000014532	DDX52	96	73.756	Oryctolagus_cuniculus
ENSFALG00000005155	DDX52	94	62.287	ENSORLG00000005241	ddx52	89	60.988	Oryzias_latipes
ENSFALG00000005155	DDX52	98	60.626	ENSORLG00015015546	ddx52	87	61.840	Oryzias_latipes_hsok
ENSFALG00000005155	DDX52	99	60.709	ENSOMEG00000017602	ddx52	89	62.437	Oryzias_melastigma
ENSFALG00000005155	DDX52	96	70.154	ENSOGAG00000000868	DDX52	99	70.326	Otolemur_garnettii
ENSFALG00000005155	DDX52	97	71.927	ENSOARG00000002998	DDX52	97	73.254	Ovis_aries
ENSFALG00000005155	DDX52	98	72.074	ENSPPAG00000028453	DDX52	98	72.373	Pan_paniscus
ENSFALG00000005155	DDX52	98	73.244	ENSPPRG00000009742	DDX52	97	73.630	Panthera_pardus
ENSFALG00000005155	DDX52	98	73.077	ENSPTIG00000013697	DDX52	97	73.459	Panthera_tigris_altaica
ENSFALG00000005155	DDX52	98	72.120	ENSPTRG00000009058	DDX52	98	72.542	Pan_troglodytes
ENSFALG00000005155	DDX52	98	71.833	ENSPANG00000022101	DDX52	98	71.864	Papio_anubis
ENSFALG00000005155	DDX52	95	63.525	ENSPKIG00000013058	ddx52	97	61.812	Paramormyrops_kingsleyae
ENSFALG00000005155	DDX52	94	77.969	ENSPSIG00000010226	DDX52	98	77.066	Pelodiscus_sinensis
ENSFALG00000005155	DDX52	77	68.094	ENSPMGG00000005458	ddx52	93	67.597	Periophthalmus_magnuspinnatus
ENSFALG00000005155	DDX52	97	71.859	ENSPEMG00000003263	Ddx52	97	72.297	Peromyscus_maniculatus_bairdii
ENSFALG00000005155	DDX52	99	70.989	ENSPCIG00000017730	DDX52	90	71.570	Phascolarctos_cinereus
ENSFALG00000005155	DDX52	94	62.010	ENSPFOG00000018378	ddx52	89	62.010	Poecilia_formosa
ENSFALG00000005155	DDX52	94	61.538	ENSPLAG00000008368	ddx52	89	61.670	Poecilia_latipinna
ENSFALG00000005155	DDX52	94	61.775	ENSPMEG00000002359	ddx52	89	61.824	Poecilia_mexicana
ENSFALG00000005155	DDX52	94	61.775	ENSPREG00000016874	ddx52	89	61.565	Poecilia_reticulata
ENSFALG00000005155	DDX52	98	71.667	ENSPPYG00000008221	DDX52	97	72.666	Pongo_abelii
ENSFALG00000005155	DDX52	97	64.527	ENSPCAG00000005814	DDX52	99	64.214	Procavia_capensis
ENSFALG00000005155	DDX52	98	72.712	ENSPVAG00000010462	DDX52	98	73.064	Pteropus_vampyrus
ENSFALG00000005155	DDX52	99	58.833	ENSPNYG00000020730	ddx52	97	59.898	Pundamilia_nyererei
ENSFALG00000005155	DDX52	94	62.563	ENSPNAG00000014707	ddx52	97	62.417	Pygocentrus_nattereri
ENSFALG00000005155	DDX52	97	71.570	ENSRNOG00000002612	Ddx52	97	73.540	Rattus_norvegicus
ENSFALG00000005155	DDX52	98	65.333	ENSRBIG00000032462	DDX52	98	65.254	Rhinopithecus_bieti
ENSFALG00000005155	DDX52	98	66.333	ENSRROG00000034760	DDX52	98	66.271	Rhinopithecus_roxellana
ENSFALG00000005155	DDX52	98	37.255	YGL171W	-	79	43.527	Saccharomyces_cerevisiae
ENSFALG00000005155	DDX52	98	72.000	ENSSBOG00000035787	DDX52	98	72.203	Saimiri_boliviensis_boliviensis
ENSFALG00000005155	DDX52	97	71.334	ENSSHAG00000013962	DDX52	96	71.595	Sarcophilus_harrisii
ENSFALG00000005155	DDX52	98	62.240	ENSSFOG00015005055	ddx52	99	64.125	Scleropages_formosus
ENSFALG00000005155	DDX52	94	60.899	ENSSMAG00000009788	ddx52	90	60.855	Scophthalmus_maximus
ENSFALG00000005155	DDX52	94	61.603	ENSSDUG00000004022	ddx52	90	62.375	Seriola_dumerili
ENSFALG00000005155	DDX52	94	61.809	ENSSLDG00000016999	ddx52	90	62.584	Seriola_lalandi_dorsalis
ENSFALG00000005155	DDX52	73	89.209	ENSSARG00000000371	-	75	89.209	Sorex_araneus
ENSFALG00000005155	DDX52	94	73.964	ENSSPUG00000000720	DDX52	96	73.171	Sphenodon_punctatus
ENSFALG00000005155	DDX52	94	60.891	ENSSPAG00000014211	ddx52	87	61.353	Stegastes_partitus
ENSFALG00000005155	DDX52	97	72.864	ENSSSCG00000021275	DDX52	98	71.808	Sus_scrofa
ENSFALG00000005155	DDX52	95	92.931	ENSTGUG00000008303	-	100	92.931	Taeniopygia_guttata
ENSFALG00000005155	DDX52	97	60.325	ENSTRUG00000017071	ddx52	86	61.409	Takifugu_rubripes
ENSFALG00000005155	DDX52	95	62.950	ENSTNIG00000009990	ddx52	98	61.945	Tetraodon_nigroviridis
ENSFALG00000005155	DDX52	75	62.722	ENSTBEG00000005982	DDX52	76	62.722	Tupaia_belangeri
ENSFALG00000005155	DDX52	98	72.621	ENSTTRG00000008917	DDX52	98	73.005	Tursiops_truncatus
ENSFALG00000005155	DDX52	98	72.575	ENSVPAG00000001979	DDX52	97	73.711	Vicugna_pacos
ENSFALG00000005155	DDX52	98	72.575	ENSVVUG00000020209	DDX52	92	82.180	Vulpes_vulpes
ENSFALG00000005155	DDX52	95	72.874	ENSXETG00000025903	ddx52	99	70.017	Xenopus_tropicalis
ENSFALG00000005155	DDX52	94	61.214	ENSXMAG00000010805	ddx52	90	61.345	Xiphophorus_maculatus