EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000005260 (Gene tree)
Gene ID: -
Gene Symbol: ASCC3
Alias: ASC1p200|HELIC1|RNAH|dJ121G13.4|dJ467N11.1
Full Name: activating signal cointegrator 1 complex subunit 3
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 246902 bases
Position: chrJH603263.1:1659032-1905933
Accession: 101811058
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005477	ResIII	PF04851.15	4.6e-26	1	2
ENSFALP00000005477	ResIII	PF04851.15	4.6e-26	2	2
ENSFALP00000005477	DEAD	PF00270.29	4.3e-53	1	2
ENSFALP00000005477	DEAD	PF00270.29	4.3e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005503	ASCC3-201	7214	XM_005043966	ENSFALP00000005477	2207 (aa)	XP_005044023	U3JRS3

Gene Model

Click here to download ENSFALG00000005260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000005260	ASCC3	61	34.456	ENSFALG00000001781	HFM1	50	34.456
ENSFALG00000005260	ASCC3	79	44.000	ENSFALG00000001368	-	88	41.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005260	ASCC3	100	82.776	ENSG00000112249	ASCC3	100	82.776	Homo_sapiens
ENSFALG00000005260	ASCC3	100	83.137	ENSAMEG00000014749	ASCC3	100	83.137	Ailuropoda_melanoleuca
ENSFALG00000005260	ASCC3	98	73.265	ENSACIG00000004551	ascc3	99	73.265	Amphilophus_citrinellus
ENSFALG00000005260	ASCC3	99	74.718	ENSAOCG00000005106	ascc3	99	75.266	Amphiprion_ocellaris
ENSFALG00000005260	ASCC3	96	75.567	ENSAPEG00000006181	ascc3	99	75.567	Amphiprion_percula
ENSFALG00000005260	ASCC3	99	74.617	ENSATEG00000024950	ascc3	99	74.617	Anabas_testudineus
ENSFALG00000005260	ASCC3	87	96.694	ENSAPLG00000012589	-	99	96.694	Anas_platyrhynchos
ENSFALG00000005260	ASCC3	100	85.805	ENSACAG00000010080	ASCC3	100	85.805	Anolis_carolinensis
ENSFALG00000005260	ASCC3	100	82.821	ENSANAG00000021476	ASCC3	100	82.821	Aotus_nancymaae
ENSFALG00000005260	ASCC3	85	79.639	ENSACLG00000006736	ascc3	97	79.692	Astatotilapia_calliptera
ENSFALG00000005260	ASCC3	100	73.895	ENSAMXG00000001395	ascc3	100	73.895	Astyanax_mexicanus
ENSFALG00000005260	ASCC3	99	82.818	ENSBTAG00000020482	ASCC3	99	82.818	Bos_taurus
ENSFALG00000005260	ASCC3	88	47.243	WBGene00013189	Y54E2A.4	99	44.887	Caenorhabditis_elegans
ENSFALG00000005260	ASCC3	99	83.577	ENSCJAG00000001507	ASCC3	100	85.853	Callithrix_jacchus
ENSFALG00000005260	ASCC3	100	83.002	ENSCAFG00000003554	ASCC3	100	83.002	Canis_familiaris
ENSFALG00000005260	ASCC3	100	83.002	ENSCAFG00020016899	ASCC3	100	83.002	Canis_lupus_dingo
ENSFALG00000005260	ASCC3	99	82.818	ENSCHIG00000023605	ASCC3	99	82.818	Capra_hircus
ENSFALG00000005260	ASCC3	89	85.368	ENSTSYG00000006324	ASCC3	100	85.368	Carlito_syrichta
ENSFALG00000005260	ASCC3	90	85.714	ENSCAPG00000010888	ASCC3	99	85.714	Cavia_aperea
ENSFALG00000005260	ASCC3	99	81.929	ENSCPOG00000013989	ASCC3	100	81.929	Cavia_porcellus
ENSFALG00000005260	ASCC3	100	83.092	ENSCCAG00000024230	ASCC3	100	83.092	Cebus_capucinus
ENSFALG00000005260	ASCC3	100	83.047	ENSCATG00000011281	ASCC3	100	83.047	Cercocebus_atys
ENSFALG00000005260	ASCC3	100	82.685	ENSCLAG00000009794	ASCC3	100	82.685	Chinchilla_lanigera
ENSFALG00000005260	ASCC3	100	82.866	ENSCSAG00000014674	ASCC3	100	82.866	Chlorocebus_sabaeus
ENSFALG00000005260	ASCC3	91	83.223	ENSCHOG00000002063	ASCC3	85	83.223	Choloepus_hoffmanni
ENSFALG00000005260	ASCC3	100	89.395	ENSCPBG00000003881	ASCC3	100	89.395	Chrysemys_picta_bellii
ENSFALG00000005260	ASCC3	81	60.988	ENSCSAVG00000007670	-	100	69.740	Ciona_savignyi
ENSFALG00000005260	ASCC3	100	83.002	ENSCANG00000004215	ASCC3	100	83.002	Colobus_angolensis_palliatus
ENSFALG00000005260	ASCC3	99	81.785	ENSCGRG00001000918	Ascc3	100	81.785	Cricetulus_griseus_chok1gshd
ENSFALG00000005260	ASCC3	99	82.299	ENSCGRG00000012933	Ascc3	99	82.299	Cricetulus_griseus_crigri
ENSFALG00000005260	ASCC3	99	74.226	ENSCSEG00000012811	ascc3	99	73.815	Cynoglossus_semilaevis
ENSFALG00000005260	ASCC3	99	72.645	ENSCVAG00000013014	ascc3	99	72.645	Cyprinodon_variegatus
ENSFALG00000005260	ASCC3	92	75.061	ENSDARG00000086678	ascc3	100	87.879	Danio_rerio
ENSFALG00000005260	ASCC3	81	92.632	ENSDNOG00000010279	ASCC3	99	92.632	Dasypus_novemcinctus
ENSFALG00000005260	ASCC3	100	82.731	ENSDORG00000008572	Ascc3	100	82.731	Dipodomys_ordii
ENSFALG00000005260	ASCC3	88	54.592	FBgn0038344	obe	89	54.671	Drosophila_melanogaster
ENSFALG00000005260	ASCC3	83	92.373	ENSETEG00000010694	-	75	92.373	Echinops_telfairi
ENSFALG00000005260	ASCC3	54	79.777	ENSEBUG00000007355	-	99	79.777	Eptatretus_burgeri
ENSFALG00000005260	ASCC3	99	83.636	ENSEASG00005006324	ASCC3	99	83.636	Equus_asinus_asinus
ENSFALG00000005260	ASCC3	99	83.727	ENSECAG00000012013	ASCC3	99	83.727	Equus_caballus
ENSFALG00000005260	ASCC3	87	77.247	ENSEEUG00000009748	ASCC3	99	77.247	Erinaceus_europaeus
ENSFALG00000005260	ASCC3	100	74.865	ENSELUG00000023441	ascc3	100	74.865	Esox_lucius
ENSFALG00000005260	ASCC3	99	83.409	ENSFCAG00000031266	ASCC3	99	83.409	Felis_catus
ENSFALG00000005260	ASCC3	100	82.348	ENSFDAG00000011358	ASCC3	100	82.348	Fukomys_damarensis
ENSFALG00000005260	ASCC3	92	81.912	ENSFHEG00000019247	ascc3	99	81.912	Fundulus_heteroclitus
ENSFALG00000005260	ASCC3	98	72.715	ENSGMOG00000018158	ascc3	100	72.715	Gadus_morhua
ENSFALG00000005260	ASCC3	100	95.115	ENSGALG00000015465	ASCC3	100	95.115	Gallus_gallus
ENSFALG00000005260	ASCC3	100	73.905	ENSGACG00000014141	ascc3	100	73.950	Gasterosteus_aculeatus
ENSFALG00000005260	ASCC3	89	90.880	ENSGAGG00000020794	ASCC3	99	90.880	Gopherus_agassizii
ENSFALG00000005260	ASCC3	100	82.731	ENSGGOG00000002790	ASCC3	100	82.731	Gorilla_gorilla
ENSFALG00000005260	ASCC3	90	74.632	ENSHBUG00000015110	ascc3	98	74.696	Haplochromis_burtoni
ENSFALG00000005260	ASCC3	100	82.565	ENSHGLG00000002093	ASCC3	100	82.565	Heterocephalus_glaber_female
ENSFALG00000005260	ASCC3	99	81.173	ENSHGLG00100005896	ASCC3	99	81.173	Heterocephalus_glaber_male
ENSFALG00000005260	ASCC3	99	75.057	ENSHCOG00000021142	ascc3	99	75.284	Hippocampus_comes
ENSFALG00000005260	ASCC3	100	76.094	ENSIPUG00000013863	ascc3	100	76.184	Ictalurus_punctatus
ENSFALG00000005260	ASCC3	99	80.788	ENSSTOG00000006645	ASCC3	100	80.788	Ictidomys_tridecemlineatus
ENSFALG00000005260	ASCC3	100	81.465	ENSJJAG00000022570	Ascc3	100	81.736	Jaculus_jaculus
ENSFALG00000005260	ASCC3	99	74.628	ENSKMAG00000003953	ascc3	99	74.628	Kryptolebias_marmoratus
ENSFALG00000005260	ASCC3	85	79.498	ENSLBEG00000009623	ascc3	100	79.658	Labrus_bergylta
ENSFALG00000005260	ASCC3	75	87.050	ENSLACG00000015253	ascc3	99	87.050	Latimeria_chalumnae
ENSFALG00000005260	ASCC3	100	79.016	ENSLOCG00000016550	ascc3	100	79.016	Lepisosteus_oculatus
ENSFALG00000005260	ASCC3	89	74.544	ENSLAFG00000011363	ASCC3	100	74.544	Loxodonta_africana
ENSFALG00000005260	ASCC3	100	83.002	ENSMFAG00000002081	ASCC3	100	83.002	Macaca_fascicularis
ENSFALG00000005260	ASCC3	100	83.047	ENSMMUG00000022287	ASCC3	100	83.047	Macaca_mulatta
ENSFALG00000005260	ASCC3	100	83.002	ENSMNEG00000032760	ASCC3	100	83.002	Macaca_nemestrina
ENSFALG00000005260	ASCC3	100	81.884	ENSMLEG00000035241	ASCC3	100	81.884	Mandrillus_leucophaeus
ENSFALG00000005260	ASCC3	99	74.447	ENSMAMG00000005917	ascc3	99	74.492	Mastacembelus_armatus
ENSFALG00000005260	ASCC3	75	83.323	ENSMZEG00005002710	ascc3	73	83.387	Maylandia_zebra
ENSFALG00000005260	ASCC3	100	94.080	ENSMGAG00000013551	ASCC3	100	94.080	Meleagris_gallopavo
ENSFALG00000005260	ASCC3	99	82.613	ENSMAUG00000018304	Ascc3	99	82.613	Mesocricetus_auratus
ENSFALG00000005260	ASCC3	99	83.569	ENSMICG00000008861	ASCC3	99	83.569	Microcebus_murinus
ENSFALG00000005260	ASCC3	100	81.699	ENSMOCG00000004549	Ascc3	100	81.699	Microtus_ochrogaster
ENSFALG00000005260	ASCC3	95	72.463	ENSMMOG00000003198	ascc3	99	72.463	Mola_mola
ENSFALG00000005260	ASCC3	100	86.805	ENSMODG00000018082	ASCC3	99	86.805	Monodelphis_domestica
ENSFALG00000005260	ASCC3	95	73.128	ENSMALG00000015536	ascc3	99	73.318	Monopterus_albus
ENSFALG00000005260	ASCC3	99	81.793	MGP_CAROLIEiJ_G0015302	Ascc3	99	81.793	Mus_caroli
ENSFALG00000005260	ASCC3	99	81.423	ENSMUSG00000038774	Ascc3	100	81.423	Mus_musculus
ENSFALG00000005260	ASCC3	99	81.559	MGP_SPRETEiJ_G0016111	Ascc3	100	81.559	Mus_spretus
ENSFALG00000005260	ASCC3	100	82.957	ENSMPUG00000001675	ASCC3	100	83.047	Mustela_putorius_furo
ENSFALG00000005260	ASCC3	99	83.091	ENSMLUG00000002886	ASCC3	99	83.091	Myotis_lucifugus
ENSFALG00000005260	ASCC3	100	82.459	ENSNGAG00000000702	Ascc3	100	82.459	Nannospalax_galili
ENSFALG00000005260	ASCC3	84	68.241	ENSNBRG00000022083	ascc3	92	68.241	Neolamprologus_brichardi
ENSFALG00000005260	ASCC3	100	82.776	ENSNLEG00000013890	ASCC3	100	82.776	Nomascus_leucogenys
ENSFALG00000005260	ASCC3	97	98.246	ENSMEUG00000003061	ASCC3	83	98.246	Notamacropus_eugenii
ENSFALG00000005260	ASCC3	88	95.745	ENSOPRG00000010249	-	79	95.745	Ochotona_princeps
ENSFALG00000005260	ASCC3	99	82.842	ENSODEG00000000069	ASCC3	99	82.842	Octodon_degus
ENSFALG00000005260	ASCC3	99	74.220	ENSONIG00000016540	ascc3	99	74.310	Oreochromis_niloticus
ENSFALG00000005260	ASCC3	99	85.454	ENSOANG00000008944	ASCC3	99	85.454	Ornithorhynchus_anatinus
ENSFALG00000005260	ASCC3	99	82.977	ENSOCUG00000002766	ASCC3	99	82.977	Oryctolagus_cuniculus
ENSFALG00000005260	ASCC3	94	75.301	ENSORLG00000004221	ascc3	99	75.349	Oryzias_latipes
ENSFALG00000005260	ASCC3	85	79.797	ENSORLG00020022595	ascc3	96	79.851	Oryzias_latipes_hni
ENSFALG00000005260	ASCC3	94	75.012	ENSORLG00015009231	ascc3	99	75.060	Oryzias_latipes_hsok
ENSFALG00000005260	ASCC3	99	73.677	ENSOMEG00000019630	ascc3	99	73.723	Oryzias_melastigma
ENSFALG00000005260	ASCC3	89	82.836	ENSOGAG00000009875	ASCC3	100	82.836	Otolemur_garnettii
ENSFALG00000005260	ASCC3	99	82.773	ENSOARG00000011627	ASCC3	99	82.773	Ovis_aries
ENSFALG00000005260	ASCC3	100	82.776	ENSPPAG00000030772	ASCC3	100	82.776	Pan_paniscus
ENSFALG00000005260	ASCC3	99	83.318	ENSPPRG00000011358	ASCC3	99	83.318	Panthera_pardus
ENSFALG00000005260	ASCC3	99	83.136	ENSPTIG00000006331	ASCC3	99	83.136	Panthera_tigris_altaica
ENSFALG00000005260	ASCC3	100	82.776	ENSPTRG00000018448	ASCC3	100	82.776	Pan_troglodytes
ENSFALG00000005260	ASCC3	100	83.047	ENSPANG00000006307	ASCC3	100	83.047	Papio_anubis
ENSFALG00000005260	ASCC3	99	75.260	ENSPKIG00000013639	ascc3	100	75.260	Paramormyrops_kingsleyae
ENSFALG00000005260	ASCC3	78	90.762	ENSPSIG00000002620	-	96	90.762	Pelodiscus_sinensis
ENSFALG00000005260	ASCC3	99	82.195	ENSPEMG00000015319	Ascc3	99	82.195	Peromyscus_maniculatus_bairdii
ENSFALG00000005260	ASCC3	69	79.789	ENSPMAG00000002163	-	100	80.334	Petromyzon_marinus
ENSFALG00000005260	ASCC3	100	86.935	ENSPCIG00000017288	ASCC3	99	87.477	Phascolarctos_cinereus
ENSFALG00000005260	ASCC3	90	75.816	ENSPFOG00000001462	ascc3	99	75.816	Poecilia_formosa
ENSFALG00000005260	ASCC3	99	74.014	ENSPREG00000017616	ascc3	99	74.014	Poecilia_reticulata
ENSFALG00000005260	ASCC3	100	81.555	ENSPPYG00000016869	ASCC3	100	81.555	Pongo_abelii
ENSFALG00000005260	ASCC3	99	74.351	ENSPCAG00000008834	ASCC3	99	74.351	Procavia_capensis
ENSFALG00000005260	ASCC3	99	76.532	ENSPVAG00000012827	ASCC3	99	76.532	Pteropus_vampyrus
ENSFALG00000005260	ASCC3	85	79.597	ENSPNYG00000018913	ascc3	97	79.650	Pundamilia_nyererei
ENSFALG00000005260	ASCC3	85	81.481	ENSPNAG00000016413	ascc3	98	81.481	Pygocentrus_nattereri
ENSFALG00000005260	ASCC3	99	81.975	ENSRNOG00000037604	Ascc3	99	81.975	Rattus_norvegicus
ENSFALG00000005260	ASCC3	100	83.047	ENSRROG00000045402	ASCC3	100	83.047	Rhinopithecus_roxellana
ENSFALG00000005260	ASCC3	79	45.838	YGR271W	-	87	45.838	Saccharomyces_cerevisiae
ENSFALG00000005260	ASCC3	100	82.799	ENSSBOG00000025142	ASCC3	100	82.799	Saimiri_boliviensis_boliviensis
ENSFALG00000005260	ASCC3	100	86.850	ENSSHAG00000016496	ASCC3	100	86.850	Sarcophilus_harrisii
ENSFALG00000005260	ASCC3	99	75.577	ENSSFOG00015010273	ascc3	99	75.769	Scleropages_formosus
ENSFALG00000005260	ASCC3	99	73.872	ENSSMAG00000012927	ascc3	99	73.962	Scophthalmus_maximus
ENSFALG00000005260	ASCC3	99	75.319	ENSSDUG00000010897	ascc3	99	75.364	Seriola_dumerili
ENSFALG00000005260	ASCC3	99	75.273	ENSSLDG00000021782	ascc3	99	75.319	Seriola_lalandi_dorsalis
ENSFALG00000005260	ASCC3	99	79.610	ENSSARG00000001858	ASCC3	92	79.610	Sorex_araneus
ENSFALG00000005260	ASCC3	100	88.517	ENSSPUG00000001842	ASCC3	100	88.517	Sphenodon_punctatus
ENSFALG00000005260	ASCC3	99	75.672	ENSSPAG00000007677	ascc3	99	75.718	Stegastes_partitus
ENSFALG00000005260	ASCC3	99	83.045	ENSSSCG00000004358	ASCC3	99	84.813	Sus_scrofa
ENSFALG00000005260	ASCC3	90	98.344	ENSTGUG00000012262	ASCC3	100	98.344	Taeniopygia_guttata
ENSFALG00000005260	ASCC3	98	68.155	ENSTNIG00000005079	ascc3	100	68.061	Tetraodon_nigroviridis
ENSFALG00000005260	ASCC3	91	94.030	ENSTBEG00000015236	ASCC3	86	94.030	Tupaia_belangeri
ENSFALG00000005260	ASCC3	99	82.544	ENSTTRG00000008255	ASCC3	96	82.544	Tursiops_truncatus
ENSFALG00000005260	ASCC3	67	91.822	ENSUAMG00000023340	-	98	91.822	Ursus_americanus
ENSFALG00000005260	ASCC3	100	82.098	ENSUMAG00000021200	ASCC3	100	82.098	Ursus_maritimus
ENSFALG00000005260	ASCC3	99	78.873	ENSVPAG00000001408	ASCC3	99	78.873	Vicugna_pacos
ENSFALG00000005260	ASCC3	100	83.002	ENSVVUG00000015397	ASCC3	100	84.872	Vulpes_vulpes
ENSFALG00000005260	ASCC3	78	85.198	ENSXETG00000032212	-	100	85.198	Xenopus_tropicalis
ENSFALG00000005260	ASCC3	99	74.265	ENSXMAG00000000071	ascc3	100	74.265	Xiphophorus_maculatus