EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000005423 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 8116 bases
Position: chrJH603316.1:1392693-1400808
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005647	PRP4	PF08799.11	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005674	PRPF4-201	1554	-	ENSFALP00000005647	517 (aa)	-	U3JS93

Gene Model

Click here to download ENSFALG00000005423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005423	PRPF4	90	85.376	ENSG00000136875	PRPF4	98	88.117	Homo_sapiens
ENSFALG00000005423	PRPF4	85	77.252	ENSAPOG00000014132	prpf4	91	77.252	Acanthochromis_polyacanthus
ENSFALG00000005423	PRPF4	90	85.806	ENSAMEG00000013048	PRPF4	96	88.341	Ailuropoda_melanoleuca
ENSFALG00000005423	PRPF4	85	76.975	ENSACIG00000005579	prpf4	99	76.975	Amphilophus_citrinellus
ENSFALG00000005423	PRPF4	85	76.126	ENSAOCG00000005457	prpf4	99	76.126	Amphiprion_ocellaris
ENSFALG00000005423	PRPF4	85	75.901	ENSAPEG00000000776	prpf4	99	75.901	Amphiprion_percula
ENSFALG00000005423	PRPF4	85	75.847	ENSATEG00000023013	prpf4	99	75.847	Anabas_testudineus
ENSFALG00000005423	PRPF4	90	93.333	ENSAPLG00000006534	PRPF4	96	95.991	Anas_platyrhynchos
ENSFALG00000005423	PRPF4	88	88.816	ENSACAG00000015110	PRPF4	98	89.955	Anolis_carolinensis
ENSFALG00000005423	PRPF4	90	85.591	ENSANAG00000022464	PRPF4	94	88.341	Aotus_nancymaae
ENSFALG00000005423	PRPF4	85	76.072	ENSACLG00000019031	prpf4	99	76.072	Astatotilapia_calliptera
ENSFALG00000005423	PRPF4	85	62.946	ENSAMXG00000006756	prpf4	86	69.457	Astyanax_mexicanus
ENSFALG00000005423	PRPF4	86	88.341	ENSBTAG00000004571	PRPF4	98	88.341	Bos_taurus
ENSFALG00000005423	PRPF4	73	46.950	WBGene00007972	prp-4	89	46.950	Caenorhabditis_elegans
ENSFALG00000005423	PRPF4	90	85.591	ENSCJAG00000017856	PRPF4	98	87.751	Callithrix_jacchus
ENSFALG00000005423	PRPF4	90	85.591	ENSCAFG00000003224	PRPF4	95	88.341	Canis_familiaris
ENSFALG00000005423	PRPF4	90	85.591	ENSCAFG00020022637	PRPF4	98	88.341	Canis_lupus_dingo
ENSFALG00000005423	PRPF4	88	86.842	ENSCHIG00000024648	-	98	88.341	Capra_hircus
ENSFALG00000005423	PRPF4	90	85.161	ENSTSYG00000010366	PRPF4	98	88.117	Carlito_syrichta
ENSFALG00000005423	PRPF4	77	84.131	ENSCAPG00000008935	PRPF4	92	84.131	Cavia_aperea
ENSFALG00000005423	PRPF4	90	85.161	ENSCPOG00000010747	-	98	87.892	Cavia_porcellus
ENSFALG00000005423	PRPF4	87	84.081	ENSCPOG00000014729	-	87	84.081	Cavia_porcellus
ENSFALG00000005423	PRPF4	90	85.806	ENSCCAG00000028990	PRPF4	98	88.565	Cebus_capucinus
ENSFALG00000005423	PRPF4	85	89.474	ENSCATG00000021552	PRPF4	98	88.117	Cercocebus_atys
ENSFALG00000005423	PRPF4	90	85.376	ENSCLAG00000013448	PRPF4	98	88.117	Chinchilla_lanigera
ENSFALG00000005423	PRPF4	75	89.175	ENSCHOG00000007233	PRPF4	100	89.175	Choloepus_hoffmanni
ENSFALG00000005423	PRPF4	92	87.474	ENSCPBG00000019136	PRPF4	73	91.031	Chrysemys_picta_bellii
ENSFALG00000005423	PRPF4	83	57.604	ENSCING00000001299	-	95	57.604	Ciona_intestinalis
ENSFALG00000005423	PRPF4	83	58.005	ENSCSAVG00000009178	-	99	58.396	Ciona_savignyi
ENSFALG00000005423	PRPF4	86	88.341	ENSCANG00000003246	PRPF4	98	88.341	Colobus_angolensis_palliatus
ENSFALG00000005423	PRPF4	90	85.376	ENSCGRG00001016992	Prpf4	98	88.117	Cricetulus_griseus_chok1gshd
ENSFALG00000005423	PRPF4	90	85.376	ENSCGRG00000017560	Prpf4	98	88.117	Cricetulus_griseus_crigri
ENSFALG00000005423	PRPF4	85	75.057	ENSCSEG00000020451	prpf4	99	75.057	Cynoglossus_semilaevis
ENSFALG00000005423	PRPF4	85	77.828	ENSDARG00000067639	prpf4	99	77.828	Danio_rerio
ENSFALG00000005423	PRPF4	86	88.315	ENSDNOG00000013203	PRPF4	98	88.315	Dasypus_novemcinctus
ENSFALG00000005423	PRPF4	90	86.022	ENSDORG00000026275	Prpf4	98	88.789	Dipodomys_ordii
ENSFALG00000005423	PRPF4	76	57.789	FBgn0036733	U4-U6-60K	97	51.363	Drosophila_melanogaster
ENSFALG00000005423	PRPF4	90	85.161	ENSETEG00000020389	PRPF4	97	87.640	Echinops_telfairi
ENSFALG00000005423	PRPF4	84	72.540	ENSEBUG00000015229	prpf4	87	73.227	Eptatretus_burgeri
ENSFALG00000005423	PRPF4	90	85.591	ENSEASG00005022678	PRPF4	98	88.341	Equus_asinus_asinus
ENSFALG00000005423	PRPF4	100	78.707	ENSECAG00000007072	PRPF4	98	88.341	Equus_caballus
ENSFALG00000005423	PRPF4	76	91.632	ENSEEUG00000007480	PRPF4	98	69.488	Erinaceus_europaeus
ENSFALG00000005423	PRPF4	85	78.507	ENSELUG00000007510	prpf4	99	78.507	Esox_lucius
ENSFALG00000005423	PRPF4	90	85.591	ENSFCAG00000005514	PRPF4	98	87.751	Felis_catus
ENSFALG00000005423	PRPF4	90	85.806	ENSFDAG00000005839	PRPF4	98	88.565	Fukomys_damarensis
ENSFALG00000005423	PRPF4	85	76.298	ENSFHEG00000001300	prpf4	99	76.298	Fundulus_heteroclitus
ENSFALG00000005423	PRPF4	90	93.869	ENSGALG00000008857	PRPF4	96	96.882	Gallus_gallus
ENSFALG00000005423	PRPF4	63	72.086	ENSGAFG00000012164	prpf4	67	72.086	Gambusia_affinis
ENSFALG00000005423	PRPF4	85	68.243	ENSGACG00000015476	prpf4	99	67.793	Gasterosteus_aculeatus
ENSFALG00000005423	PRPF4	90	87.185	ENSGAGG00000025029	PRPF4	94	90.807	Gopherus_agassizii
ENSFALG00000005423	PRPF4	90	85.376	ENSGGOG00000006943	PRPF4	98	88.117	Gorilla_gorilla
ENSFALG00000005423	PRPF4	85	76.072	ENSHBUG00000000562	prpf4	99	76.072	Haplochromis_burtoni
ENSFALG00000005423	PRPF4	86	74.944	ENSHGLG00000016628	-	88	75.839	Heterocephalus_glaber_female
ENSFALG00000005423	PRPF4	86	68.386	ENSHGLG00000003838	-	84	68.386	Heterocephalus_glaber_female
ENSFALG00000005423	PRPF4	90	85.376	ENSHGLG00000015191	PRPF4	98	88.117	Heterocephalus_glaber_female
ENSFALG00000005423	PRPF4	86	68.386	ENSHGLG00100005571	-	84	68.386	Heterocephalus_glaber_male
ENSFALG00000005423	PRPF4	85	76.923	ENSIPUG00000017956	PRPF4	99	76.923	Ictalurus_punctatus
ENSFALG00000005423	PRPF4	90	85.376	ENSSTOG00000027833	PRPF4	98	87.919	Ictidomys_tridecemlineatus
ENSFALG00000005423	PRPF4	90	85.376	ENSJJAG00000008838	Prpf4	98	88.117	Jaculus_jaculus
ENSFALG00000005423	PRPF4	85	75.395	ENSKMAG00000013236	prpf4	99	75.395	Kryptolebias_marmoratus
ENSFALG00000005423	PRPF4	85	75.964	ENSLBEG00000020611	prpf4	99	75.964	Labrus_bergylta
ENSFALG00000005423	PRPF4	86	76.339	ENSLACG00000016317	PRPF4	98	76.339	Latimeria_chalumnae
ENSFALG00000005423	PRPF4	85	79.864	ENSLOCG00000000581	prpf4	99	79.864	Lepisosteus_oculatus
ENSFALG00000005423	PRPF4	88	87.061	ENSLAFG00000018225	PRPF4	98	88.315	Loxodonta_africana
ENSFALG00000005423	PRPF4	85	89.245	ENSMFAG00000039397	PRPF4	98	87.892	Macaca_fascicularis
ENSFALG00000005423	PRPF4	85	89.474	ENSMMUG00000005844	PRPF4	98	88.117	Macaca_mulatta
ENSFALG00000005423	PRPF4	85	78.032	ENSMNEG00000033737	PRPF4	98	76.906	Macaca_nemestrina
ENSFALG00000005423	PRPF4	85	89.474	ENSMLEG00000040284	PRPF4	98	88.117	Mandrillus_leucophaeus
ENSFALG00000005423	PRPF4	86	75.506	ENSMAMG00000020141	prpf4	99	75.621	Mastacembelus_armatus
ENSFALG00000005423	PRPF4	85	76.072	ENSMZEG00005023205	prpf4	99	76.072	Maylandia_zebra
ENSFALG00000005423	PRPF4	88	95.197	ENSMGAG00000001796	PRPF4	95	96.652	Meleagris_gallopavo
ENSFALG00000005423	PRPF4	86	88.117	ENSMAUG00000018022	Prpf4	98	88.117	Mesocricetus_auratus
ENSFALG00000005423	PRPF4	90	85.591	ENSMICG00000015022	PRPF4	98	87.528	Microcebus_murinus
ENSFALG00000005423	PRPF4	90	85.161	ENSMOCG00000018273	Prpf4	98	87.892	Microtus_ochrogaster
ENSFALG00000005423	PRPF4	85	73.923	ENSMMOG00000021177	prpf4	99	73.923	Mola_mola
ENSFALG00000005423	PRPF4	90	85.161	ENSMODG00000004444	-	97	87.416	Monodelphis_domestica
ENSFALG00000005423	PRPF4	90	85.161	ENSMODG00000025096	-	94	87.613	Monodelphis_domestica
ENSFALG00000005423	PRPF4	85	76.524	ENSMALG00000013624	prpf4	99	76.524	Monopterus_albus
ENSFALG00000005423	PRPF4	90	85.376	MGP_CAROLIEiJ_G0026078	Prpf4	98	88.117	Mus_caroli
ENSFALG00000005423	PRPF4	90	85.376	ENSMUSG00000066148	Prpf4	98	88.117	Mus_musculus
ENSFALG00000005423	PRPF4	90	85.161	MGP_PahariEiJ_G0028413	Prpf4	98	87.892	Mus_pahari
ENSFALG00000005423	PRPF4	90	85.376	MGP_SPRETEiJ_G0027042	Prpf4	98	88.117	Mus_spretus
ENSFALG00000005423	PRPF4	90	85.806	ENSMPUG00000007883	PRPF4	98	88.341	Mustela_putorius_furo
ENSFALG00000005423	PRPF4	86	88.341	ENSMLUG00000015309	-	95	88.341	Myotis_lucifugus
ENSFALG00000005423	PRPF4	86	86.996	ENSMLUG00000008626	-	95	86.996	Myotis_lucifugus
ENSFALG00000005423	PRPF4	90	79.785	ENSNGAG00000000468	Prpf4	98	82.287	Nannospalax_galili
ENSFALG00000005423	PRPF4	85	76.298	ENSNBRG00000007972	prpf4	99	76.298	Neolamprologus_brichardi
ENSFALG00000005423	PRPF4	90	85.591	ENSNLEG00000016647	PRPF4	98	88.341	Nomascus_leucogenys
ENSFALG00000005423	PRPF4	86	87.416	ENSMEUG00000013256	PRPF4	99	87.416	Notamacropus_eugenii
ENSFALG00000005423	PRPF4	90	86.022	ENSOPRG00000005302	PRPF4	98	88.196	Ochotona_princeps
ENSFALG00000005423	PRPF4	90	85.591	ENSODEG00000018147	PRPF4	98	88.341	Octodon_degus
ENSFALG00000005423	PRPF4	85	76.072	ENSONIG00000012671	prpf4	99	76.072	Oreochromis_niloticus
ENSFALG00000005423	PRPF4	90	85.806	ENSOCUG00000005046	PRPF4	98	88.565	Oryctolagus_cuniculus
ENSFALG00000005423	PRPF4	85	74.603	ENSORLG00000019641	prpf4	99	74.603	Oryzias_latipes
ENSFALG00000005423	PRPF4	85	74.603	ENSORLG00020019438	prpf4	99	74.603	Oryzias_latipes_hni
ENSFALG00000005423	PRPF4	85	74.150	ENSOMEG00000020941	prpf4	99	74.150	Oryzias_melastigma
ENSFALG00000005423	PRPF4	86	84.305	ENSOGAG00000007802	PRPF4	95	84.305	Otolemur_garnettii
ENSFALG00000005423	PRPF4	86	88.341	ENSOARG00000006319	PRPF4	95	88.341	Ovis_aries
ENSFALG00000005423	PRPF4	90	85.376	ENSPPAG00000041797	PRPF4	98	88.117	Pan_paniscus
ENSFALG00000005423	PRPF4	90	85.591	ENSPPRG00000014360	PRPF4	98	88.341	Panthera_pardus
ENSFALG00000005423	PRPF4	90	85.591	ENSPTIG00000009574	PRPF4	98	88.341	Panthera_tigris_altaica
ENSFALG00000005423	PRPF4	90	85.376	ENSPTRG00000021274	PRPF4	98	87.528	Pan_troglodytes
ENSFALG00000005423	PRPF4	85	89.245	ENSPANG00000025776	PRPF4	94	87.892	Papio_anubis
ENSFALG00000005423	PRPF4	85	80.543	ENSPKIG00000017259	prpf4	99	80.543	Paramormyrops_kingsleyae
ENSFALG00000005423	PRPF4	87	90.359	ENSPSIG00000010713	PRPF4	90	90.359	Pelodiscus_sinensis
ENSFALG00000005423	PRPF4	85	54.375	ENSPMGG00000000997	prpf4	85	54.167	Periophthalmus_magnuspinnatus
ENSFALG00000005423	PRPF4	90	85.376	ENSPEMG00000024115	Prpf4	98	88.117	Peromyscus_maniculatus_bairdii
ENSFALG00000005423	PRPF4	86	87.416	ENSPCIG00000003821	PRPF4	99	87.416	Phascolarctos_cinereus
ENSFALG00000005423	PRPF4	85	67.785	ENSPFOG00000013524	prpf4	99	71.779	Poecilia_formosa
ENSFALG00000005423	PRPF4	64	69.345	ENSPLAG00000011620	prpf4	99	68.502	Poecilia_latipinna
ENSFALG00000005423	PRPF4	65	72.619	ENSPMEG00000006813	prpf4	99	72.619	Poecilia_mexicana
ENSFALG00000005423	PRPF4	86	87.865	ENSPCAG00000002561	PRPF4	99	87.865	Procavia_capensis
ENSFALG00000005423	PRPF4	86	88.341	ENSPCOG00000011975	PRPF4	98	88.341	Propithecus_coquereli
ENSFALG00000005423	PRPF4	90	82.151	ENSPVAG00000004708	PRPF4	98	83.964	Pteropus_vampyrus
ENSFALG00000005423	PRPF4	85	76.072	ENSPNYG00000008013	prpf4	99	76.072	Pundamilia_nyererei
ENSFALG00000005423	PRPF4	85	77.828	ENSPNAG00000000697	prpf4	99	77.828	Pygocentrus_nattereri
ENSFALG00000005423	PRPF4	90	85.161	ENSRNOG00000014777	Prpf4	98	87.892	Rattus_norvegicus
ENSFALG00000005423	PRPF4	86	88.341	ENSRBIG00000040221	PRPF4	98	88.341	Rhinopithecus_bieti
ENSFALG00000005423	PRPF4	86	88.341	ENSRROG00000040240	PRPF4	98	88.341	Rhinopithecus_roxellana
ENSFALG00000005423	PRPF4	90	85.376	ENSSHAG00000017658	PRPF4	97	87.640	Sarcophilus_harrisii
ENSFALG00000005423	PRPF4	85	81.222	ENSSFOG00015008963	prpf4	99	81.222	Scleropages_formosus
ENSFALG00000005423	PRPF4	85	75.621	ENSSMAG00000008889	prpf4	99	75.621	Scophthalmus_maximus
ENSFALG00000005423	PRPF4	85	75.395	ENSSDUG00000022083	prpf4	86	75.169	Seriola_dumerili
ENSFALG00000005423	PRPF4	85	75.621	ENSSLDG00000008115	prpf4	86	75.395	Seriola_lalandi_dorsalis
ENSFALG00000005423	PRPF4	88	89.648	ENSSPUG00000015582	PRPF4	98	90.807	Sphenodon_punctatus
ENSFALG00000005423	PRPF4	85	70.470	ENSSPAG00000011286	prpf4	99	70.470	Stegastes_partitus
ENSFALG00000005423	PRPF4	90	85.591	ENSSSCG00000024648	PRPF4	98	88.341	Sus_scrofa
ENSFALG00000005423	PRPF4	87	96.205	ENSTGUG00000002623	PRPF4	100	98.588	Taeniopygia_guttata
ENSFALG00000005423	PRPF4	85	73.756	ENSTRUG00000008853	prpf4	99	73.756	Takifugu_rubripes
ENSFALG00000005423	PRPF4	85	74.603	ENSTNIG00000013250	prpf4	99	74.603	Tetraodon_nigroviridis
ENSFALG00000005423	PRPF4	90	76.774	ENSTBEG00000000821	PRPF4	98	78.619	Tupaia_belangeri
ENSFALG00000005423	PRPF4	62	91.275	ENSTTRG00000003246	PRPF4	71	91.275	Tursiops_truncatus
ENSFALG00000005423	PRPF4	66	80.409	ENSUAMG00000018288	PRPF4	88	86.319	Ursus_americanus
ENSFALG00000005423	PRPF4	90	84.946	ENSUMAG00000019375	PRPF4	98	87.668	Ursus_maritimus
ENSFALG00000005423	PRPF4	90	85.806	ENSVPAG00000005281	PRPF4	98	87.973	Vicugna_pacos
ENSFALG00000005423	PRPF4	90	84.435	ENSVVUG00000002476	PRPF4	99	88.209	Vulpes_vulpes
ENSFALG00000005423	PRPF4	66	58.772	ENSXCOG00000006101	prpf4	87	58.772	Xiphophorus_couchianus
ENSFALG00000005423	PRPF4	85	65.455	ENSXMAG00000002750	prpf4	94	65.909	Xiphophorus_maculatus