EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000005467 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 64979 bases
Position: chrJH603199.1:3616495-3681473
Accession: 101807817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005699	ResIII	PF04851.15	4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005726	-	3598	-	ENSFALP00000005699	919 (aa)	XP_005042359	U3JSE5

Gene Model

Click here to download ENSFALG00000005467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000005467	-	54	32.143	ENSFALG00000006087	CHD1L	50	32.008
ENSFALG00000005467	-	55	33.028	ENSFALG00000006089	SMARCAD1	50	33.022
ENSFALG00000005467	-	74	41.713	ENSFALG00000009480	RAD54L	90	41.374
ENSFALG00000005467	-	59	33.111	ENSFALG00000003400	ERCC6L2	54	32.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005467	-	79	75.242	ENSG00000265817	FSBP	99	75.242	Homo_sapiens
ENSFALG00000005467	-	99	69.130	ENSG00000197275	RAD54B	99	69.130	Homo_sapiens
ENSFALG00000005467	-	99	67.679	ENSAMEG00000005834	-	99	67.679	Ailuropoda_melanoleuca
ENSFALG00000005467	-	99	56.583	ENSACIG00000013005	rad54b	99	56.739	Amphilophus_citrinellus
ENSFALG00000005467	-	99	56.821	ENSAOCG00000008523	rad54b	99	56.821	Amphiprion_ocellaris
ENSFALG00000005467	-	99	56.441	ENSAPEG00000001673	rad54b	99	56.441	Amphiprion_percula
ENSFALG00000005467	-	99	56.678	ENSATEG00000001527	rad54b	99	56.678	Anabas_testudineus
ENSFALG00000005467	-	99	87.555	ENSAPLG00000014366	-	99	87.555	Anas_platyrhynchos
ENSFALG00000005467	-	86	76.389	ENSACAG00000003671	-	98	76.389	Anolis_carolinensis
ENSFALG00000005467	-	70	75.155	ENSANAG00000019528	-	99	75.155	Aotus_nancymaae
ENSFALG00000005467	-	99	56.678	ENSACLG00000007826	rad54b	99	56.678	Astatotilapia_calliptera
ENSFALG00000005467	-	85	61.006	ENSAMXG00000039985	rad54b	95	60.875	Astyanax_mexicanus
ENSFALG00000005467	-	99	66.415	ENSBTAG00000000632	RAD54B	99	66.415	Bos_taurus
ENSFALG00000005467	-	69	39.037	WBGene00013792	Y116A8C.13	95	32.820	Caenorhabditis_elegans
ENSFALG00000005467	-	99	68.988	ENSCJAG00000000080	-	99	74.689	Callithrix_jacchus
ENSFALG00000005467	-	99	67.467	ENSCAFG00000009179	RAD54B	99	67.467	Canis_familiaris
ENSFALG00000005467	-	99	67.576	ENSCAFG00020012084	-	99	67.576	Canis_lupus_dingo
ENSFALG00000005467	-	99	66.415	ENSCHIG00000008230	-	99	66.415	Capra_hircus
ENSFALG00000005467	-	99	68.182	ENSTSYG00000013234	-	99	68.182	Carlito_syrichta
ENSFALG00000005467	-	99	67.721	ENSCPOG00000011643	-	99	67.721	Cavia_porcellus
ENSFALG00000005467	-	99	68.838	ENSCCAG00000011754	-	99	74.965	Cebus_capucinus
ENSFALG00000005467	-	99	68.913	ENSCATG00000030661	-	99	74.689	Cercocebus_atys
ENSFALG00000005467	-	99	67.101	ENSCLAG00000010476	-	99	67.101	Chinchilla_lanigera
ENSFALG00000005467	-	99	68.913	ENSCSAG00000012712	-	99	68.913	Chlorocebus_sabaeus
ENSFALG00000005467	-	99	79.085	ENSCPBG00000003204	-	99	79.363	Chrysemys_picta_bellii
ENSFALG00000005467	-	99	68.913	ENSCANG00000017939	-	99	74.965	Colobus_angolensis_palliatus
ENSFALG00000005467	-	99	65.351	ENSCGRG00001020184	Rad54b	99	65.351	Cricetulus_griseus_chok1gshd
ENSFALG00000005467	-	99	65.060	ENSCGRG00000016752	Rad54b	99	65.060	Cricetulus_griseus_crigri
ENSFALG00000005467	-	88	60.345	ENSCSEG00000001601	rad54b	98	87.500	Cynoglossus_semilaevis
ENSFALG00000005467	-	99	58.342	ENSCVAG00000009200	rad54b	99	58.342	Cyprinodon_variegatus
ENSFALG00000005467	-	99	54.784	ENSDARG00000092134	rad54b	99	62.074	Danio_rerio
ENSFALG00000005467	-	99	67.609	ENSDNOG00000015535	-	99	67.609	Dasypus_novemcinctus
ENSFALG00000005467	-	99	67.869	ENSDORG00000002492	Rad54b	99	67.869	Dipodomys_ordii
ENSFALG00000005467	-	86	67.293	ENSETEG00000010605	-	100	67.250	Echinops_telfairi
ENSFALG00000005467	-	99	46.402	ENSEBUG00000009104	rad54b	98	46.888	Eptatretus_burgeri
ENSFALG00000005467	-	96	67.076	ENSEASG00005004021	-	99	67.076	Equus_asinus_asinus
ENSFALG00000005467	-	99	67.171	ENSECAG00000021949	-	99	67.171	Equus_caballus
ENSFALG00000005467	-	71	72.327	ENSEEUG00000008056	-	72	72.327	Erinaceus_europaeus
ENSFALG00000005467	-	99	54.478	ENSELUG00000009287	rad54b	99	54.478	Esox_lucius
ENSFALG00000005467	-	99	67.497	ENSFCAG00000015513	-	99	74.105	Felis_catus
ENSFALG00000005467	-	99	67.500	ENSFDAG00000020541	-	100	67.500	Fukomys_damarensis
ENSFALG00000005467	-	85	60.656	ENSFHEG00000014382	rad54b	86	60.656	Fundulus_heteroclitus
ENSFALG00000005467	-	85	60.451	ENSGMOG00000014774	rad54b	98	60.451	Gadus_morhua
ENSFALG00000005467	-	99	85.808	ENSGALG00000043597	RAD54B	99	85.808	Gallus_gallus
ENSFALG00000005467	-	99	57.998	ENSGAFG00000007901	rad54b	99	57.889	Gambusia_affinis
ENSFALG00000005467	-	99	56.051	ENSGACG00000009128	rad54b	100	56.051	Gasterosteus_aculeatus
ENSFALG00000005467	-	99	79.348	ENSGAGG00000018747	-	99	79.348	Gopherus_agassizii
ENSFALG00000005467	-	99	69.348	ENSGGOG00000023516	-	99	69.348	Gorilla_gorilla
ENSFALG00000005467	-	99	56.748	ENSHBUG00000016017	rad54b	99	56.748	Haplochromis_burtoni
ENSFALG00000005467	-	99	67.784	ENSHGLG00000008263	RAD54B	99	67.497	Heterocephalus_glaber_female
ENSFALG00000005467	-	99	66.738	ENSHGLG00100008108	-	99	66.738	Heterocephalus_glaber_male
ENSFALG00000005467	-	99	55.748	ENSHCOG00000004764	rad54b	98	58.148	Hippocampus_comes
ENSFALG00000005467	-	99	55.031	ENSIPUG00000018531	rad54b	99	55.031	Ictalurus_punctatus
ENSFALG00000005467	-	99	66.159	ENSSTOG00000010791	-	99	66.159	Ictidomys_tridecemlineatus
ENSFALG00000005467	-	99	66.812	ENSJJAG00000010314	Rad54b	99	66.812	Jaculus_jaculus
ENSFALG00000005467	-	85	60.277	ENSKMAG00000004744	rad54b	91	60.277	Kryptolebias_marmoratus
ENSFALG00000005467	-	81	71.505	ENSLACG00000000859	-	100	71.505	Latimeria_chalumnae
ENSFALG00000005467	-	99	60.832	ENSLOCG00000010100	rad54b	94	67.166	Lepisosteus_oculatus
ENSFALG00000005467	-	87	71.698	ENSLAFG00000015315	-	98	71.698	Loxodonta_africana
ENSFALG00000005467	-	99	68.913	ENSMFAG00000031629	-	99	74.689	Macaca_fascicularis
ENSFALG00000005467	-	99	68.913	ENSMMUG00000005659	-	99	68.913	Macaca_mulatta
ENSFALG00000005467	-	99	68.804	ENSMNEG00000016408	-	99	68.804	Macaca_nemestrina
ENSFALG00000005467	-	99	68.913	ENSMLEG00000006946	-	99	68.913	Mandrillus_leucophaeus
ENSFALG00000005467	-	99	57.096	ENSMAMG00000012269	rad54b	99	57.096	Mastacembelus_armatus
ENSFALG00000005467	-	99	56.642	ENSMZEG00005005281	rad54b	99	56.642	Maylandia_zebra
ENSFALG00000005467	-	99	86.026	ENSMGAG00000012024	-	99	86.026	Meleagris_gallopavo
ENSFALG00000005467	-	99	66.228	ENSMAUG00000013586	Rad54b	99	66.228	Mesocricetus_auratus
ENSFALG00000005467	-	86	73.929	ENSMICG00000000754	-	91	73.929	Microcebus_murinus
ENSFALG00000005467	-	99	65.132	ENSMOCG00000020035	Rad54b	99	65.132	Microtus_ochrogaster
ENSFALG00000005467	-	87	60.098	ENSMMOG00000003394	rad54b	91	60.098	Mola_mola
ENSFALG00000005467	-	87	73.383	ENSMODG00000007343	-	99	73.383	Monodelphis_domestica
ENSFALG00000005467	-	70	60.775	ENSMALG00000001520	rad54b	99	60.775	Monopterus_albus
ENSFALG00000005467	-	99	65.027	MGP_CAROLIEiJ_G0025810	Rad54b	99	65.027	Mus_caroli
ENSFALG00000005467	-	99	64.885	ENSMUSG00000078773	Rad54b	99	64.885	Mus_musculus
ENSFALG00000005467	-	99	65.060	MGP_PahariEiJ_G0023933	Rad54b	99	65.279	Mus_pahari
ENSFALG00000005467	-	99	65.468	MGP_SPRETEiJ_G0026758	Rad54b	99	65.468	Mus_spretus
ENSFALG00000005467	-	88	72.953	ENSMPUG00000008878	-	99	72.953	Mustela_putorius_furo
ENSFALG00000005467	-	99	68.048	ENSMLUG00000008953	-	99	68.048	Myotis_lucifugus
ENSFALG00000005467	-	99	67.570	ENSNGAG00000017537	Rad54b	99	67.570	Nannospalax_galili
ENSFALG00000005467	-	99	56.786	ENSNBRG00000013394	rad54b	99	56.786	Neolamprologus_brichardi
ENSFALG00000005467	-	99	68.696	ENSNLEG00000003062	-	99	74.827	Nomascus_leucogenys
ENSFALG00000005467	-	70	70.297	ENSMEUG00000012426	-	71	70.297	Notamacropus_eugenii
ENSFALG00000005467	-	99	66.631	ENSODEG00000019564	-	99	66.631	Octodon_degus
ENSFALG00000005467	-	78	84.444	ENSODEG00000002650	-	97	84.444	Octodon_degus
ENSFALG00000005467	-	99	57.771	ENSONIG00000006067	rad54b	99	57.771	Oreochromis_niloticus
ENSFALG00000005467	-	81	76.769	ENSOANG00000011348	-	99	76.769	Ornithorhynchus_anatinus
ENSFALG00000005467	-	99	66.377	ENSOCUG00000016478	-	99	66.377	Oryctolagus_cuniculus
ENSFALG00000005467	-	99	56.614	ENSORLG00000008918	rad54b	99	64.441	Oryzias_latipes
ENSFALG00000005467	-	70	64.286	ENSORLG00020012171	rad54b	99	64.286	Oryzias_latipes_hni
ENSFALG00000005467	-	99	56.276	ENSORLG00015018536	rad54b	99	56.276	Oryzias_latipes_hsok
ENSFALG00000005467	-	83	61.966	ENSOMEG00000004345	rad54b	99	61.966	Oryzias_melastigma
ENSFALG00000005467	-	99	66.993	ENSOGAG00000007854	-	99	66.993	Otolemur_garnettii
ENSFALG00000005467	-	87	72.409	ENSOARG00000007691	-	98	72.409	Ovis_aries
ENSFALG00000005467	-	99	67.609	ENSPPAG00000029572	-	99	67.609	Pan_paniscus
ENSFALG00000005467	-	99	67.497	ENSPPRG00000007571	-	99	73.967	Panthera_pardus
ENSFALG00000005467	-	79	74.105	ENSPTIG00000012670	-	99	74.105	Panthera_tigris_altaica
ENSFALG00000005467	-	99	68.913	ENSPTRG00000020427	-	99	75.104	Pan_troglodytes
ENSFALG00000005467	-	99	69.022	ENSPANG00000019566	-	99	69.022	Papio_anubis
ENSFALG00000005467	-	99	59.509	ENSPKIG00000014974	rad54b	99	59.509	Paramormyrops_kingsleyae
ENSFALG00000005467	-	99	75.435	ENSPSIG00000002383	-	99	79.172	Pelodiscus_sinensis
ENSFALG00000005467	-	99	64.956	ENSPEMG00000012133	Rad54b	99	64.956	Peromyscus_maniculatus_bairdii
ENSFALG00000005467	-	86	59.273	ENSPMAG00000002916	rad54b	99	59.524	Petromyzon_marinus
ENSFALG00000005467	-	90	72.530	ENSPCIG00000020151	-	94	73.599	Phascolarctos_cinereus
ENSFALG00000005467	-	99	57.384	ENSPFOG00000023411	rad54b	99	57.384	Poecilia_formosa
ENSFALG00000005467	-	99	57.489	ENSPLAG00000010430	rad54b	99	57.489	Poecilia_latipinna
ENSFALG00000005467	-	99	57.384	ENSPMEG00000016873	rad54b	99	57.384	Poecilia_mexicana
ENSFALG00000005467	-	99	57.746	ENSPREG00000018443	rad54b	99	57.746	Poecilia_reticulata
ENSFALG00000005467	-	99	69.239	ENSPPYG00000018750	-	99	69.239	Pongo_abelii
ENSFALG00000005467	-	99	67.756	ENSPCOG00000026845	-	99	73.582	Propithecus_coquereli
ENSFALG00000005467	-	81	73.289	ENSPVAG00000000261	-	86	73.289	Pteropus_vampyrus
ENSFALG00000005467	-	85	61.461	ENSPNYG00000018303	rad54b	96	61.461	Pundamilia_nyererei
ENSFALG00000005467	-	89	70.000	ENSPNAG00000000295	rad54b	96	70.000	Pygocentrus_nattereri
ENSFALG00000005467	-	99	65.098	ENSRNOG00000039949	Rad54b	99	65.098	Rattus_norvegicus
ENSFALG00000005467	-	99	68.587	ENSRBIG00000020419	-	99	68.587	Rhinopithecus_bieti
ENSFALG00000005467	-	99	68.478	ENSRROG00000039897	-	99	68.478	Rhinopithecus_roxellana
ENSFALG00000005467	-	85	36.353	YBR073W	RDH54	68	40.030	Saccharomyces_cerevisiae
ENSFALG00000005467	-	99	68.450	ENSSBOG00000028501	-	99	68.450	Saimiri_boliviensis_boliviensis
ENSFALG00000005467	-	99	68.039	ENSSHAG00000017038	-	99	68.039	Sarcophilus_harrisii
ENSFALG00000005467	-	65	66.391	ENSSFOG00015008483	rad54b	93	66.391	Scleropages_formosus
ENSFALG00000005467	-	99	54.855	ENSSMAG00000018659	rad54b	99	56.555	Scophthalmus_maximus
ENSFALG00000005467	-	98	56.310	ENSSDUG00000001122	rad54b	98	56.310	Seriola_dumerili
ENSFALG00000005467	-	99	56.335	ENSSLDG00000013787	rad54b	99	56.335	Seriola_lalandi_dorsalis
ENSFALG00000005467	-	99	76.066	ENSSPUG00000016497	-	99	76.066	Sphenodon_punctatus
ENSFALG00000005467	-	99	57.592	ENSSPAG00000012800	rad54b	99	57.592	Stegastes_partitus
ENSFALG00000005467	-	99	67.505	ENSSSCG00000006101	-	99	73.275	Sus_scrofa
ENSFALG00000005467	-	99	93.784	ENSTGUG00000011880	-	100	93.784	Taeniopygia_guttata
ENSFALG00000005467	-	99	54.984	ENSTRUG00000010015	rad54b	99	54.984	Takifugu_rubripes
ENSFALG00000005467	-	99	63.439	ENSTTRG00000006312	-	99	63.439	Tursiops_truncatus
ENSFALG00000005467	-	99	68.221	ENSUMAG00000016401	-	99	68.221	Ursus_maritimus
ENSFALG00000005467	-	99	67.029	ENSVPAG00000003157	-	99	67.029	Vicugna_pacos
ENSFALG00000005467	-	99	55.065	ENSXETG00000025924	rad54b	99	60.075	Xenopus_tropicalis
ENSFALG00000005467	-	99	57.405	ENSXMAG00000013141	rad54b	99	57.438	Xiphophorus_maculatus