EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000005598 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 4640 bases
Position: chrJH603270.1:2517462-2522101
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005836	PRP38	PF03371.15	1.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005863	-	816	-	ENSFALP00000005836	271 (aa)	-	U3JST2

Gene Model

Click here to download ENSFALG00000005598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000005598	-	99	86.296	ENSFALG00000003612	-	63	93.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005598	-	100	96.679	ENSG00000134748	PRPF38A	87	96.679	Homo_sapiens
ENSFALG00000005598	-	66	87.778	ENSAPOG00000011652	prpf38a	87	80.147	Acanthochromis_polyacanthus
ENSFALG00000005598	-	100	96.679	ENSAMEG00000009319	PRPF38A	87	96.679	Ailuropoda_melanoleuca
ENSFALG00000005598	-	66	84.831	ENSACIG00000012292	prpf38a	62	84.043	Amphilophus_citrinellus
ENSFALG00000005598	-	66	87.778	ENSAOCG00000018004	prpf38a	87	80.147	Amphiprion_ocellaris
ENSFALG00000005598	-	66	87.778	ENSAPEG00000021414	prpf38a	87	80.147	Amphiprion_percula
ENSFALG00000005598	-	66	86.111	ENSATEG00000004608	prpf38a	87	78.676	Anabas_testudineus
ENSFALG00000005598	-	91	99.190	ENSAPLG00000005827	PRPF38A	99	99.190	Anas_platyrhynchos
ENSFALG00000005598	-	100	95.203	ENSACAG00000008249	PRPF38A	87	95.203	Anolis_carolinensis
ENSFALG00000005598	-	100	96.679	ENSANAG00000027839	PRPF38A	87	96.679	Aotus_nancymaae
ENSFALG00000005598	-	88	75.309	ENSANAG00000029204	-	83	68.724	Aotus_nancymaae
ENSFALG00000005598	-	66	85.556	ENSACLG00000021595	prpf38a	87	78.676	Astatotilapia_calliptera
ENSFALG00000005598	-	100	79.044	ENSAMXG00000029274	prpf38a	87	79.044	Astyanax_mexicanus
ENSFALG00000005598	-	100	96.679	ENSBTAG00000002720	PRPF38A	87	96.679	Bos_taurus
ENSFALG00000005598	-	100	96.679	ENSCJAG00000021594	PRPF38A	87	96.679	Callithrix_jacchus
ENSFALG00000005598	-	100	96.679	ENSCAFG00000003740	PRPF38A	87	96.679	Canis_familiaris
ENSFALG00000005598	-	100	96.679	ENSCAFG00020010939	PRPF38A	87	96.679	Canis_lupus_dingo
ENSFALG00000005598	-	100	96.679	ENSCHIG00000024730	PRPF38A	87	96.679	Capra_hircus
ENSFALG00000005598	-	99	95.911	ENSTSYG00000031994	-	95	95.911	Carlito_syrichta
ENSFALG00000005598	-	100	96.679	ENSTSYG00000009868	-	87	96.679	Carlito_syrichta
ENSFALG00000005598	-	100	96.679	ENSCPOG00000005079	PRPF38A	87	96.679	Cavia_porcellus
ENSFALG00000005598	-	100	96.310	ENSCCAG00000026502	PRPF38A	87	96.310	Cebus_capucinus
ENSFALG00000005598	-	100	65.314	ENSCATG00000044190	-	88	63.838	Cercocebus_atys
ENSFALG00000005598	-	100	96.679	ENSCATG00000032296	PRPF38A	87	96.679	Cercocebus_atys
ENSFALG00000005598	-	100	96.679	ENSCLAG00000005816	PRPF38A	87	96.679	Chinchilla_lanigera
ENSFALG00000005598	-	74	90.909	ENSCHOG00000008388	PRPF38A	64	90.909	Choloepus_hoffmanni
ENSFALG00000005598	-	100	97.417	ENSCPBG00000014791	PRPF38A	87	97.417	Chrysemys_picta_bellii
ENSFALG00000005598	-	65	70.455	ENSCSAVG00000009580	-	65	63.959	Ciona_savignyi
ENSFALG00000005598	-	95	96.512	ENSCANG00000032608	PRPF38A	86	96.512	Colobus_angolensis_palliatus
ENSFALG00000005598	-	100	96.679	ENSCGRG00001018502	-	87	96.679	Cricetulus_griseus_chok1gshd
ENSFALG00000005598	-	70	83.158	ENSCGRG00001002557	-	65	83.158	Cricetulus_griseus_chok1gshd
ENSFALG00000005598	-	100	96.679	ENSCGRG00000014868	Prpf38a	87	96.679	Cricetulus_griseus_crigri
ENSFALG00000005598	-	66	86.517	ENSCSEG00000001269	prpf38a	65	85.638	Cynoglossus_semilaevis
ENSFALG00000005598	-	66	87.778	ENSCVAG00000012305	prpf38a	87	79.412	Cyprinodon_variegatus
ENSFALG00000005598	-	100	79.044	ENSDARG00000039213	prpf38a	87	79.044	Danio_rerio
ENSFALG00000005598	-	100	96.679	ENSDNOG00000042326	PRPF38A	87	96.679	Dasypus_novemcinctus
ENSFALG00000005598	-	82	78.378	ENSDORG00000023691	-	64	82.888	Dipodomys_ordii
ENSFALG00000005598	-	82	78.378	ENSDORG00000025371	-	64	82.888	Dipodomys_ordii
ENSFALG00000005598	-	100	81.181	ENSDORG00000023857	-	85	81.181	Dipodomys_ordii
ENSFALG00000005598	-	72	77.665	ENSEBUG00000012588	prpf38a	62	77.604	Eptatretus_burgeri
ENSFALG00000005598	-	100	96.679	ENSEASG00005014427	PRPF38A	87	96.679	Equus_asinus_asinus
ENSFALG00000005598	-	100	96.679	ENSECAG00000022628	PRPF38A	87	96.679	Equus_caballus
ENSFALG00000005598	-	66	82.778	ENSELUG00000021094	prpf38a	87	76.838	Esox_lucius
ENSFALG00000005598	-	100	96.679	ENSFCAG00000002518	PRPF38A	87	96.679	Felis_catus
ENSFALG00000005598	-	100	96.310	ENSFDAG00000011287	PRPF38A	87	96.310	Fukomys_damarensis
ENSFALG00000005598	-	81	75.785	ENSFHEG00000014317	prpf38a	64	85.789	Fundulus_heteroclitus
ENSFALG00000005598	-	100	98.524	ENSGALG00000010627	PRPF38A	87	98.524	Gallus_gallus
ENSFALG00000005598	-	66	88.889	ENSGAFG00000012422	prpf38a	87	80.147	Gambusia_affinis
ENSFALG00000005598	-	66	84.615	ENSGACG00000005423	prpf38a	87	77.737	Gasterosteus_aculeatus
ENSFALG00000005598	-	100	97.417	ENSGAGG00000020547	PRPF38A	87	97.417	Gopherus_agassizii
ENSFALG00000005598	-	100	96.679	ENSGGOG00000003940	PRPF38A	87	96.679	Gorilla_gorilla
ENSFALG00000005598	-	55	89.865	ENSHBUG00000020572	prpf38a	63	89.796	Haplochromis_burtoni
ENSFALG00000005598	-	100	96.679	ENSHGLG00000000475	PRPF38A	87	96.679	Heterocephalus_glaber_female
ENSFALG00000005598	-	100	80.443	ENSHGLG00000007918	-	86	80.074	Heterocephalus_glaber_female
ENSFALG00000005598	-	100	80.443	ENSHGLG00100003928	-	86	80.074	Heterocephalus_glaber_male
ENSFALG00000005598	-	100	96.679	ENSHGLG00100008935	PRPF38A	87	96.679	Heterocephalus_glaber_male
ENSFALG00000005598	-	82	72.000	ENSIPUG00000005757	prpf38a	61	83.770	Ictalurus_punctatus
ENSFALG00000005598	-	100	96.679	ENSSTOG00000015610	PRPF38A	87	96.679	Ictidomys_tridecemlineatus
ENSFALG00000005598	-	100	96.310	ENSJJAG00000015811	Prpf38a	87	96.310	Jaculus_jaculus
ENSFALG00000005598	-	66	87.222	ENSKMAG00000006588	prpf38a	87	79.044	Kryptolebias_marmoratus
ENSFALG00000005598	-	95	74.319	ENSLBEG00000020585	prpf38a	87	76.838	Labrus_bergylta
ENSFALG00000005598	-	100	92.620	ENSLACG00000011495	PRPF38A	87	92.620	Latimeria_chalumnae
ENSFALG00000005598	-	100	77.206	ENSLOCG00000006262	prpf38a	87	78.676	Lepisosteus_oculatus
ENSFALG00000005598	-	100	96.679	ENSLAFG00000025862	PRPF38A	87	96.679	Loxodonta_africana
ENSFALG00000005598	-	100	96.679	ENSMFAG00000039449	PRPF38A	87	96.679	Macaca_fascicularis
ENSFALG00000005598	-	100	96.679	ENSMMUG00000014333	PRPF38A	97	96.679	Macaca_mulatta
ENSFALG00000005598	-	100	65.314	ENSMNEG00000040242	-	88	64.207	Macaca_nemestrina
ENSFALG00000005598	-	100	96.679	ENSMNEG00000031221	PRPF38A	87	96.679	Macaca_nemestrina
ENSFALG00000005598	-	100	96.679	ENSMLEG00000041105	PRPF38A	87	96.679	Mandrillus_leucophaeus
ENSFALG00000005598	-	66	87.222	ENSMAMG00000015431	prpf38a	87	79.779	Mastacembelus_armatus
ENSFALG00000005598	-	66	85.556	ENSMZEG00005017838	prpf38a	87	78.676	Maylandia_zebra
ENSFALG00000005598	-	95	98.450	ENSMGAG00000011176	PRPF38A	86	98.450	Meleagris_gallopavo
ENSFALG00000005598	-	82	91.480	ENSMAUG00000018029	-	72	91.053	Mesocricetus_auratus
ENSFALG00000005598	-	100	96.679	ENSMICG00000014193	PRPF38A	87	96.679	Microcebus_murinus
ENSFALG00000005598	-	100	96.679	ENSMOCG00000013080	Prpf38a	87	96.679	Microtus_ochrogaster
ENSFALG00000005598	-	80	77.419	ENSMMOG00000016972	prpf38a	67	83.684	Mola_mola
ENSFALG00000005598	-	100	94.118	ENSMODG00000000644	PRPF38A	87	94.485	Monodelphis_domestica
ENSFALG00000005598	-	66	86.667	ENSMALG00000019363	prpf38a	84	79.412	Monopterus_albus
ENSFALG00000005598	-	100	96.310	MGP_CAROLIEiJ_G0026269	Prpf38a	87	96.310	Mus_caroli
ENSFALG00000005598	-	100	96.310	ENSMUSG00000063800	Prpf38a	87	96.310	Mus_musculus
ENSFALG00000005598	-	100	96.310	MGP_PahariEiJ_G0028602	Prpf38a	87	96.310	Mus_pahari
ENSFALG00000005598	-	100	95.941	MGP_SPRETEiJ_G0027238	Prpf38a	87	95.941	Mus_spretus
ENSFALG00000005598	-	100	96.679	ENSMPUG00000006896	PRPF38A	87	96.679	Mustela_putorius_furo
ENSFALG00000005598	-	100	96.679	ENSNGAG00000011884	Prpf38a	87	96.679	Nannospalax_galili
ENSFALG00000005598	-	66	84.270	ENSNBRG00000004013	prpf38a	61	83.511	Neolamprologus_brichardi
ENSFALG00000005598	-	96	70.498	ENSNLEG00000012592	-	86	70.498	Nomascus_leucogenys
ENSFALG00000005598	-	100	61.993	ENSNLEG00000033398	-	79	61.993	Nomascus_leucogenys
ENSFALG00000005598	-	100	96.679	ENSNLEG00000017999	PRPF38A	87	96.679	Nomascus_leucogenys
ENSFALG00000005598	-	100	92.251	ENSMEUG00000003860	PRPF38A	87	92.251	Notamacropus_eugenii
ENSFALG00000005598	-	69	95.745	ENSOPRG00000008985	PRPF38A	79	95.789	Ochotona_princeps
ENSFALG00000005598	-	100	96.679	ENSODEG00000005869	PRPF38A	87	96.679	Octodon_degus
ENSFALG00000005598	-	66	84.444	ENSONIG00000007816	prpf38a	87	77.941	Oreochromis_niloticus
ENSFALG00000005598	-	100	96.679	ENSOCUG00000000963	PRPF38A	87	96.679	Oryctolagus_cuniculus
ENSFALG00000005598	-	96	79.151	ENSORLG00000013485	prpf38a	86	79.336	Oryzias_latipes
ENSFALG00000005598	-	96	79.151	ENSORLG00020002130	prpf38a	86	79.336	Oryzias_latipes_hni
ENSFALG00000005598	-	96	78.764	ENSORLG00015021393	prpf38a	86	78.967	Oryzias_latipes_hsok
ENSFALG00000005598	-	95	78.599	ENSOMEG00000016333	prpf38a	87	78.676	Oryzias_melastigma
ENSFALG00000005598	-	100	96.679	ENSOGAG00000005423	PRPF38A	87	96.679	Otolemur_garnettii
ENSFALG00000005598	-	100	96.679	ENSOARG00000005373	PRPF38A	87	96.679	Ovis_aries
ENSFALG00000005598	-	100	73.801	ENSPPAG00000033867	-	86	73.801	Pan_paniscus
ENSFALG00000005598	-	100	96.679	ENSPPAG00000030905	PRPF38A	87	96.679	Pan_paniscus
ENSFALG00000005598	-	100	96.679	ENSPPRG00000013268	PRPF38A	87	96.679	Panthera_pardus
ENSFALG00000005598	-	100	96.679	ENSPTIG00000015419	PRPF38A	87	96.679	Panthera_tigris_altaica
ENSFALG00000005598	-	100	96.679	ENSPTRG00000000739	PRPF38A	87	96.679	Pan_troglodytes
ENSFALG00000005598	-	100	96.679	ENSPANG00000015483	PRPF38A	87	96.679	Papio_anubis
ENSFALG00000005598	-	100	75.646	ENSPKIG00000011439	prpf38a	87	77.122	Paramormyrops_kingsleyae
ENSFALG00000005598	-	100	97.048	ENSPSIG00000017487	PRPF38A	87	97.048	Pelodiscus_sinensis
ENSFALG00000005598	-	78	79.621	ENSPMGG00000021352	prpf38a	85	75.564	Periophthalmus_magnuspinnatus
ENSFALG00000005598	-	100	96.679	ENSPEMG00000023277	-	87	96.679	Peromyscus_maniculatus_bairdii
ENSFALG00000005598	-	100	89.051	ENSPEMG00000011212	-	87	88.321	Peromyscus_maniculatus_bairdii
ENSFALG00000005598	-	100	93.750	ENSPCIG00000022369	-	87	94.118	Phascolarctos_cinereus
ENSFALG00000005598	-	80	78.440	ENSPFOG00000004248	prpf38a	87	80.147	Poecilia_formosa
ENSFALG00000005598	-	91	73.123	ENSPLAG00000010328	prpf38a	87	80.147	Poecilia_latipinna
ENSFALG00000005598	-	81	75.664	ENSPMEG00000011804	prpf38a	88	80.147	Poecilia_mexicana
ENSFALG00000005598	-	100	93.040	ENSPPYG00000001348	PRPF38A	86	93.040	Pongo_abelii
ENSFALG00000005598	-	100	96.679	ENSPCAG00000013328	PRPF38A	87	96.679	Procavia_capensis
ENSFALG00000005598	-	100	96.679	ENSPCOG00000016387	-	87	96.679	Propithecus_coquereli
ENSFALG00000005598	-	100	72.694	ENSPCOG00000020709	-	62	76.842	Propithecus_coquereli
ENSFALG00000005598	-	100	96.679	ENSPVAG00000009803	PRPF38A	87	96.679	Pteropus_vampyrus
ENSFALG00000005598	-	66	85.556	ENSPNYG00000005571	prpf38a	87	78.676	Pundamilia_nyererei
ENSFALG00000005598	-	100	79.779	ENSPNAG00000010399	prpf38a	87	79.779	Pygocentrus_nattereri
ENSFALG00000005598	-	100	97.048	ENSRNOG00000009451	Prpf38a	87	97.048	Rattus_norvegicus
ENSFALG00000005598	-	100	96.679	ENSRBIG00000036442	PRPF38A	87	96.679	Rhinopithecus_bieti
ENSFALG00000005598	-	100	58.303	ENSRBIG00000034053	-	57	75.524	Rhinopithecus_bieti
ENSFALG00000005598	-	100	59.041	ENSRROG00000034606	-	56	74.825	Rhinopithecus_roxellana
ENSFALG00000005598	-	98	79.245	ENSRROG00000040003	-	88	79.245	Rhinopithecus_roxellana
ENSFALG00000005598	-	100	96.679	ENSRROG00000032788	PRPF38A	87	96.679	Rhinopithecus_roxellana
ENSFALG00000005598	-	100	96.679	ENSSBOG00000019515	PRPF38A	87	96.679	Saimiri_boliviensis_boliviensis
ENSFALG00000005598	-	99	94.096	ENSSHAG00000006906	-	100	94.465	Sarcophilus_harrisii
ENSFALG00000005598	-	96	65.517	ENSSHAG00000006029	-	60	76.667	Sarcophilus_harrisii
ENSFALG00000005598	-	100	76.471	ENSSFOG00015013572	prpf38a	87	77.206	Scleropages_formosus
ENSFALG00000005598	-	66	84.444	ENSSMAG00000015379	prpf38a	62	83.684	Scophthalmus_maximus
ENSFALG00000005598	-	66	86.111	ENSSDUG00000001324	prpf38a	87	79.044	Seriola_dumerili
ENSFALG00000005598	-	66	86.111	ENSSLDG00000014803	prpf38a	87	79.044	Seriola_lalandi_dorsalis
ENSFALG00000005598	-	79	97.209	ENSSARG00000014458	PRPF38A	69	97.209	Sorex_araneus
ENSFALG00000005598	-	100	95.572	ENSSPUG00000013259	PRPF38A	87	95.572	Sphenodon_punctatus
ENSFALG00000005598	-	66	65.730	ENSSPAG00000010449	prpf38a	84	59.851	Stegastes_partitus
ENSFALG00000005598	-	100	96.679	ENSSSCG00000028288	PRPF38A	87	96.679	Sus_scrofa
ENSFALG00000005598	-	100	98.893	ENSTGUG00000008995	PRPF38A	87	98.893	Taeniopygia_guttata
ENSFALG00000005598	-	66	84.444	ENSTRUG00000003374	prpf38a	58	83.684	Takifugu_rubripes
ENSFALG00000005598	-	66	82.418	ENSTNIG00000005533	prpf38a	87	76.277	Tetraodon_nigroviridis
ENSFALG00000005598	-	100	95.941	ENSTBEG00000000725	PRPF38A	87	95.941	Tupaia_belangeri
ENSFALG00000005598	-	100	96.679	ENSTTRG00000016139	PRPF38A	87	96.679	Tursiops_truncatus
ENSFALG00000005598	-	100	96.679	ENSUAMG00000000625	PRPF38A	87	96.679	Ursus_americanus
ENSFALG00000005598	-	100	96.679	ENSUMAG00000022674	PRPF38A	87	96.679	Ursus_maritimus
ENSFALG00000005598	-	70	95.263	ENSVPAG00000000907	PRPF38A	87	90.037	Vicugna_pacos
ENSFALG00000005598	-	100	96.679	ENSVVUG00000004475	PRPF38A	87	96.679	Vulpes_vulpes
ENSFALG00000005598	-	100	83.456	ENSXETG00000008060	prpf38a	87	87.868	Xenopus_tropicalis
ENSFALG00000005598	-	66	86.667	ENSXCOG00000007393	prpf38a	86	73.063	Xiphophorus_couchianus
ENSFALG00000005598	-	66	88.889	ENSXMAG00000026143	prpf38a	87	80.147	Xiphophorus_maculatus