EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000005711 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 21676 bases
Position: chrJH603199.1:5243193-5264868
Accession: 101813736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000005956	POP1	PF06978.11	6.6e-39	1	2
ENSFALP00000005956	POP1	PF06978.11	6.6e-39	2	2
ENSFALP00000005956	POPLD	PF08170.12	1.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000005983	POP1-201	3024	-	ENSFALP00000005956	1007 (aa)	XP_005042390	U3JT52

Gene Model

Click here to download ENSFALG00000005711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005711	POP1	100	60.907	ENSG00000104356	POP1	100	60.847	Homo_sapiens
ENSFALG00000005711	POP1	100	47.664	ENSAPOG00000008198	pop1	100	47.048	Acanthochromis_polyacanthus
ENSFALG00000005711	POP1	100	59.423	ENSAMEG00000000556	POP1	100	59.231	Ailuropoda_melanoleuca
ENSFALG00000005711	POP1	100	46.191	ENSACIG00000004169	POP1	100	46.146	Amphilophus_citrinellus
ENSFALG00000005711	POP1	100	47.188	ENSAOCG00000010991	pop1	100	47.182	Amphiprion_ocellaris
ENSFALG00000005711	POP1	100	44.466	ENSAPEG00000007607	pop1	96	46.868	Amphiprion_percula
ENSFALG00000005711	POP1	100	46.992	ENSATEG00000024814	POP1	100	46.679	Anabas_testudineus
ENSFALG00000005711	POP1	92	84.887	ENSAPLG00000014418	POP1	99	84.490	Anas_platyrhynchos
ENSFALG00000005711	POP1	99	59.467	ENSACAG00000016083	POP1	100	59.299	Anolis_carolinensis
ENSFALG00000005711	POP1	88	67.771	ENSANAG00000026360	POP1	99	67.771	Aotus_nancymaae
ENSFALG00000005711	POP1	100	48.649	ENSACLG00000010951	pop1	100	47.587	Astatotilapia_calliptera
ENSFALG00000005711	POP1	100	46.082	ENSAMXG00000014483	POP1	100	45.760	Astyanax_mexicanus
ENSFALG00000005711	POP1	100	57.854	ENSBTAG00000012596	POP1	100	57.659	Bos_taurus
ENSFALG00000005711	POP1	100	61.035	ENSCJAG00000015567	POP1	100	61.035	Callithrix_jacchus
ENSFALG00000005711	POP1	100	59.961	ENSCAFG00000000469	POP1	100	59.007	Canis_familiaris
ENSFALG00000005711	POP1	100	60.348	ENSCAFG00020026765	POP1	100	59.399	Canis_lupus_dingo
ENSFALG00000005711	POP1	100	56.759	ENSCHIG00000017066	POP1	100	57.517	Capra_hircus
ENSFALG00000005711	POP1	100	58.784	ENSTSYG00000003097	POP1	100	58.744	Carlito_syrichta
ENSFALG00000005711	POP1	100	56.853	ENSCAPG00000007251	POP1	100	57.101	Cavia_aperea
ENSFALG00000005711	POP1	100	58.285	ENSCPOG00000002901	POP1	100	58.341	Cavia_porcellus
ENSFALG00000005711	POP1	100	60.195	ENSCCAG00000018939	POP1	100	60.938	Cebus_capucinus
ENSFALG00000005711	POP1	100	60.251	ENSCATG00000040916	POP1	100	60.116	Cercocebus_atys
ENSFALG00000005711	POP1	100	58.058	ENSCLAG00000007208	POP1	97	58.309	Chinchilla_lanigera
ENSFALG00000005711	POP1	90	62.703	ENSCSAG00000012340	POP1	99	62.703	Chlorocebus_sabaeus
ENSFALG00000005711	POP1	92	59.236	ENSCHOG00000011432	POP1	95	59.442	Choloepus_hoffmanni
ENSFALG00000005711	POP1	100	71.875	ENSCPBG00000006373	POP1	100	71.289	Chrysemys_picta_bellii
ENSFALG00000005711	POP1	82	41.224	ENSCING00000008323	-	88	41.224	Ciona_intestinalis
ENSFALG00000005711	POP1	100	60.773	ENSCANG00000001647	POP1	100	60.638	Colobus_angolensis_palliatus
ENSFALG00000005711	POP1	100	57.255	ENSCGRG00001017308	Pop1	100	57.493	Cricetulus_griseus_chok1gshd
ENSFALG00000005711	POP1	100	54.126	ENSCGRG00000010824	Pop1	100	53.967	Cricetulus_griseus_crigri
ENSFALG00000005711	POP1	100	45.480	ENSCSEG00000008737	POP1	100	45.524	Cynoglossus_semilaevis
ENSFALG00000005711	POP1	100	46.860	ENSCVAG00000022248	pop1	100	46.360	Cyprinodon_variegatus
ENSFALG00000005711	POP1	51	44.466	ENSDARG00000102087	pop1	99	43.762	Danio_rerio
ENSFALG00000005711	POP1	100	55.993	ENSDNOG00000019974	POP1	100	56.567	Dasypus_novemcinctus
ENSFALG00000005711	POP1	100	52.182	ENSDORG00000015384	Pop1	100	51.741	Dipodomys_ordii
ENSFALG00000005711	POP1	78	34.236	FBgn0026702	l(1)G0045	93	33.805	Drosophila_melanogaster
ENSFALG00000005711	POP1	88	54.466	ENSETEG00000007839	POP1	88	54.035	Echinops_telfairi
ENSFALG00000005711	POP1	100	59.593	ENSEASG00005003189	POP1	98	59.593	Equus_asinus_asinus
ENSFALG00000005711	POP1	100	59.593	ENSECAG00000024236	POP1	100	59.593	Equus_caballus
ENSFALG00000005711	POP1	61	51.885	ENSEEUG00000003050	-	55	80.723	Erinaceus_europaeus
ENSFALG00000005711	POP1	100	46.079	ENSELUG00000003526	pop1	100	46.161	Esox_lucius
ENSFALG00000005711	POP1	100	60.000	ENSFCAG00000002168	POP1	100	60.000	Felis_catus
ENSFALG00000005711	POP1	100	58.083	ENSFDAG00000017068	POP1	100	58.083	Fukomys_damarensis
ENSFALG00000005711	POP1	100	47.313	ENSFHEG00000019518	pop1	100	46.590	Fundulus_heteroclitus
ENSFALG00000005711	POP1	100	43.654	ENSGMOG00000000659	POP1	100	43.353	Gadus_morhua
ENSFALG00000005711	POP1	100	47.184	ENSGAFG00000019770	POP1	100	46.887	Gambusia_affinis
ENSFALG00000005711	POP1	100	45.118	ENSGACG00000003499	pop1	100	43.918	Gasterosteus_aculeatus
ENSFALG00000005711	POP1	100	72.043	ENSGAGG00000011737	POP1	98	71.554	Gopherus_agassizii
ENSFALG00000005711	POP1	100	59.847	ENSGGOG00000003176	POP1	100	59.714	Gorilla_gorilla
ENSFALG00000005711	POP1	100	48.456	ENSHBUG00000021583	pop1	100	47.587	Haplochromis_burtoni
ENSFALG00000005711	POP1	100	57.915	ENSHGLG00000006029	POP1	100	57.915	Heterocephalus_glaber_female
ENSFALG00000005711	POP1	100	57.915	ENSHGLG00100016879	POP1	100	57.915	Heterocephalus_glaber_male
ENSFALG00000005711	POP1	91	47.166	ENSHCOG00000013888	pop1	97	47.273	Hippocampus_comes
ENSFALG00000005711	POP1	100	44.907	ENSIPUG00000018336	pop1	100	43.547	Ictalurus_punctatus
ENSFALG00000005711	POP1	100	58.357	ENSSTOG00000011455	POP1	97	58.357	Ictidomys_tridecemlineatus
ENSFALG00000005711	POP1	100	57.490	ENSJJAG00000013325	Pop1	100	57.629	Jaculus_jaculus
ENSFALG00000005711	POP1	100	46.686	ENSKMAG00000001346	POP1	100	46.784	Kryptolebias_marmoratus
ENSFALG00000005711	POP1	89	47.448	ENSLBEG00000024457	POP1	93	47.845	Labrus_bergylta
ENSFALG00000005711	POP1	94	55.781	ENSLACG00000012498	POP1	97	55.671	Latimeria_chalumnae
ENSFALG00000005711	POP1	100	47.923	ENSLOCG00000009817	POP1	100	47.633	Lepisosteus_oculatus
ENSFALG00000005711	POP1	100	59.363	ENSLAFG00000010770	POP1	100	59.556	Loxodonta_africana
ENSFALG00000005711	POP1	100	60.580	ENSMFAG00000000347	POP1	100	60.445	Macaca_fascicularis
ENSFALG00000005711	POP1	100	60.290	ENSMNEG00000036870	POP1	100	60.155	Macaca_nemestrina
ENSFALG00000005711	POP1	100	60.483	ENSMLEG00000034986	POP1	100	60.348	Mandrillus_leucophaeus
ENSFALG00000005711	POP1	100	47.143	ENSMAMG00000004040	pop1	100	47.036	Mastacembelus_armatus
ENSFALG00000005711	POP1	100	48.456	ENSMZEG00005025448	pop1	100	47.587	Maylandia_zebra
ENSFALG00000005711	POP1	100	79.155	ENSMGAG00000012167	POP1	100	78.866	Meleagris_gallopavo
ENSFALG00000005711	POP1	100	58.641	ENSMAUG00000017537	Pop1	100	58.544	Mesocricetus_auratus
ENSFALG00000005711	POP1	100	59.671	ENSMICG00000004361	POP1	100	59.768	Microcebus_murinus
ENSFALG00000005711	POP1	100	56.754	ENSMOCG00000006356	Pop1	100	56.961	Microtus_ochrogaster
ENSFALG00000005711	POP1	100	44.922	ENSMMOG00000018242	pop1	100	44.814	Mola_mola
ENSFALG00000005711	POP1	100	60.308	ENSMODG00000006561	POP1	100	60.308	Monodelphis_domestica
ENSFALG00000005711	POP1	100	48.792	ENSMALG00000012621	POP1	100	48.252	Monopterus_albus
ENSFALG00000005711	POP1	100	55.977	MGP_CAROLIEiJ_G0019726	Pop1	100	56.335	Mus_caroli
ENSFALG00000005711	POP1	100	56.074	ENSMUSG00000022325	Pop1	100	56.171	Mus_musculus
ENSFALG00000005711	POP1	100	55.545	MGP_PahariEiJ_G0019735	Pop1	100	55.794	Mus_pahari
ENSFALG00000005711	POP1	100	56.365	MGP_SPRETEiJ_G0020622	Pop1	100	56.725	Mus_spretus
ENSFALG00000005711	POP1	100	59.614	ENSMPUG00000015250	POP1	100	59.420	Mustela_putorius_furo
ENSFALG00000005711	POP1	100	55.922	ENSMLUG00000010204	POP1	100	55.825	Myotis_lucifugus
ENSFALG00000005711	POP1	100	57.992	ENSNGAG00000001582	Pop1	100	57.992	Nannospalax_galili
ENSFALG00000005711	POP1	89	48.048	ENSNBRG00000002356	pop1	100	45.587	Neolamprologus_brichardi
ENSFALG00000005711	POP1	100	60.308	ENSNLEG00000002541	POP1	100	60.174	Nomascus_leucogenys
ENSFALG00000005711	POP1	93	54.621	ENSMEUG00000003118	POP1	95	54.410	Notamacropus_eugenii
ENSFALG00000005711	POP1	100	56.573	ENSOPRG00000007667	POP1	100	56.378	Ochotona_princeps
ENSFALG00000005711	POP1	100	57.629	ENSODEG00000003984	POP1	100	58.058	Octodon_degus
ENSFALG00000005711	POP1	100	48.263	ENSONIG00000016445	pop1	100	47.394	Oreochromis_niloticus
ENSFALG00000005711	POP1	59	56.773	ENSOANG00000001278	-	94	59.756	Ornithorhynchus_anatinus
ENSFALG00000005711	POP1	100	57.224	ENSOCUG00000017400	POP1	100	57.224	Oryctolagus_cuniculus
ENSFALG00000005711	POP1	100	47.363	ENSORLG00000002839	pop1	100	47.559	Oryzias_latipes
ENSFALG00000005711	POP1	90	48.867	ENSORLG00020022450	POP1	96	49.244	Oryzias_latipes_hni
ENSFALG00000005711	POP1	100	48.195	ENSORLG00015012746	POP1	100	47.965	Oryzias_latipes_hsok
ENSFALG00000005711	POP1	100	48.188	ENSOMEG00000006915	pop1	99	47.317	Oryzias_melastigma
ENSFALG00000005711	POP1	100	57.681	ENSOGAG00000001466	POP1	100	58.293	Otolemur_garnettii
ENSFALG00000005711	POP1	100	60.811	ENSPPAG00000018410	POP1	100	60.676	Pan_paniscus
ENSFALG00000005711	POP1	100	59.263	ENSPPRG00000005002	POP1	100	59.651	Panthera_pardus
ENSFALG00000005711	POP1	100	59.748	ENSPTIG00000016527	POP1	100	59.748	Panthera_tigris_altaica
ENSFALG00000005711	POP1	100	61.004	ENSPTRG00000020458	POP1	100	60.870	Pan_troglodytes
ENSFALG00000005711	POP1	100	60.290	ENSPANG00000009704	POP1	100	60.155	Papio_anubis
ENSFALG00000005711	POP1	100	48.263	ENSPKIG00000016325	POP1	100	47.876	Paramormyrops_kingsleyae
ENSFALG00000005711	POP1	100	69.404	ENSPSIG00000012343	POP1	100	68.915	Pelodiscus_sinensis
ENSFALG00000005711	POP1	90	48.346	ENSPMGG00000022253	POP1	95	48.879	Periophthalmus_magnuspinnatus
ENSFALG00000005711	POP1	99	56.298	ENSPEMG00000023633	Pop1	100	56.775	Peromyscus_maniculatus_bairdii
ENSFALG00000005711	POP1	90	42.061	ENSPMAG00000003209	POP1	99	42.166	Petromyzon_marinus
ENSFALG00000005711	POP1	100	59.595	ENSPCIG00000012216	POP1	100	59.962	Phascolarctos_cinereus
ENSFALG00000005711	POP1	100	47.721	ENSPFOG00000012490	POP1	100	47.517	Poecilia_formosa
ENSFALG00000005711	POP1	100	47.485	ENSPLAG00000004646	POP1	100	47.099	Poecilia_latipinna
ENSFALG00000005711	POP1	100	47.348	ENSPMEG00000019592	POP1	100	47.144	Poecilia_mexicana
ENSFALG00000005711	POP1	100	47.276	ENSPREG00000020951	POP1	100	47.013	Poecilia_reticulata
ENSFALG00000005711	POP1	100	60.521	ENSPPYG00000018777	POP1	100	60.386	Pongo_abelii
ENSFALG00000005711	POP1	100	56.989	ENSPCAG00000016662	POP1	100	56.989	Procavia_capensis
ENSFALG00000005711	POP1	100	60.078	ENSPCOG00000019420	POP1	100	60.409	Propithecus_coquereli
ENSFALG00000005711	POP1	100	59.274	ENSPVAG00000014468	POP1	100	58.685	Pteropus_vampyrus
ENSFALG00000005711	POP1	89	48.584	ENSPNYG00000004476	pop1	94	48.973	Pundamilia_nyererei
ENSFALG00000005711	POP1	100	44.506	ENSPNAG00000000265	pop1	100	41.998	Pygocentrus_nattereri
ENSFALG00000005711	POP1	100	56.573	ENSRNOG00000005243	Pop1	100	56.738	Rattus_norvegicus
ENSFALG00000005711	POP1	100	60.116	ENSRBIG00000007996	POP1	100	60.116	Rhinopithecus_bieti
ENSFALG00000005711	POP1	100	60.251	ENSRROG00000012334	POP1	100	60.116	Rhinopithecus_roxellana
ENSFALG00000005711	POP1	99	59.902	ENSSBOG00000020830	POP1	100	59.902	Saimiri_boliviensis_boliviensis
ENSFALG00000005711	POP1	100	60.425	ENSSHAG00000000296	POP1	100	60.425	Sarcophilus_harrisii
ENSFALG00000005711	POP1	100	47.624	ENSSFOG00015007429	pop1	99	46.609	Scleropages_formosus
ENSFALG00000005711	POP1	92	48.252	ENSSMAG00000010467	POP1	100	45.614	Scophthalmus_maximus
ENSFALG00000005711	POP1	100	46.408	ENSSDUG00000007817	POP1	100	46.496	Seriola_dumerili
ENSFALG00000005711	POP1	100	46.553	ENSSLDG00000012565	POP1	100	46.869	Seriola_lalandi_dorsalis
ENSFALG00000005711	POP1	100	63.930	ENSSPUG00000003550	-	100	63.240	Sphenodon_punctatus
ENSFALG00000005711	POP1	100	46.523	ENSSPAG00000014955	pop1	94	49.130	Stegastes_partitus
ENSFALG00000005711	POP1	100	59.118	ENSSSCG00000006078	POP1	100	58.829	Sus_scrofa
ENSFALG00000005711	POP1	92	81.545	ENSTGUG00000012011	-	99	81.582	Taeniopygia_guttata
ENSFALG00000005711	POP1	100	43.945	ENSTRUG00000010856	pop1	100	43.848	Takifugu_rubripes
ENSFALG00000005711	POP1	92	46.365	ENSTNIG00000013297	pop1	97	46.631	Tetraodon_nigroviridis
ENSFALG00000005711	POP1	92	58.421	ENSTBEG00000014214	POP1	95	58.635	Tupaia_belangeri
ENSFALG00000005711	POP1	100	57.670	ENSTTRG00000016071	POP1	100	57.476	Tursiops_truncatus
ENSFALG00000005711	POP1	99	59.314	ENSUAMG00000017309	POP1	95	62.179	Ursus_americanus
ENSFALG00000005711	POP1	100	59.095	ENSUMAG00000016952	POP1	100	64.143	Ursus_maritimus
ENSFALG00000005711	POP1	83	62.545	ENSVPAG00000008278	POP1	82	61.605	Vicugna_pacos
ENSFALG00000005711	POP1	100	60.155	ENSVVUG00000010994	POP1	100	59.205	Vulpes_vulpes
ENSFALG00000005711	POP1	100	43.202	ENSXCOG00000017043	POP1	100	42.386	Xiphophorus_couchianus
ENSFALG00000005711	POP1	100	46.893	ENSXMAG00000002472	POP1	100	46.035	Xiphophorus_maculatus