EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000005768 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 22773 bases
Position: chrJH603224.1:2642362-2665134
Accession: 101815722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000006008	KH_1	PF00013.29	6.2e-70	1	4
ENSFALP00000006008	KH_1	PF00013.29	6.2e-70	2	4
ENSFALP00000006008	KH_1	PF00013.29	6.2e-70	3	4
ENSFALP00000006008	KH_1	PF00013.29	6.2e-70	4	4
ENSFALP00000006008	KH_2	PF07650.17	1.2e-22	1	2
ENSFALP00000006008	KH_2	PF07650.17	1.2e-22	2	2
ENSFALP00000006008	DUF1897	PF09005.10	7.3e-13	1	2
ENSFALP00000006008	DUF1897	PF09005.10	7.3e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000006035	FUBP1-201	2358	-	ENSFALP00000006008	657 (aa)	XP_005050272	U3JTA4

Gene Model

Click here to download ENSFALG00000005768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000005768	FUBP1	55	40.625	ENSFALG00000003949	-	65	40.625
ENSFALG00000005768	FUBP1	81	54.095	ENSFALG00000001444	FUBP3	86	69.501
ENSFALG00000005768	FUBP1	52	31.169	ENSFALG00000009615	IGF2BP3	74	30.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005768	FUBP1	69	97.351	ENSG00000162613	FUBP1	100	85.345	Homo_sapiens
ENSFALG00000005768	FUBP1	98	70.642	ENSAPOG00000014845	fubp1	70	76.586	Acanthochromis_polyacanthus
ENSFALG00000005768	FUBP1	69	92.662	ENSAMEG00000007372	FUBP1	99	91.141	Ailuropoda_melanoleuca
ENSFALG00000005768	FUBP1	97	70.015	ENSACIG00000020024	fubp1	69	74.393	Amphilophus_citrinellus
ENSFALG00000005768	FUBP1	97	67.328	ENSAPEG00000012232	fubp1	72	77.802	Amphiprion_percula
ENSFALG00000005768	FUBP1	98	72.741	ENSATEG00000018619	fubp1	70	78.936	Anabas_testudineus
ENSFALG00000005768	FUBP1	92	99.834	ENSAPLG00000005965	FUBP1	100	99.834	Anas_platyrhynchos
ENSFALG00000005768	FUBP1	99	86.331	ENSACAG00000006310	FUBP1	98	84.397	Anolis_carolinensis
ENSFALG00000005768	FUBP1	100	71.772	ENSACLG00000006708	fubp1	72	78.492	Astatotilapia_calliptera
ENSFALG00000005768	FUBP1	83	76.536	ENSAMXG00000005525	fubp1	64	86.628	Astyanax_mexicanus
ENSFALG00000005768	FUBP1	98	95.969	ENSCJAG00000007062	FUBP1	99	96.417	Callithrix_jacchus
ENSFALG00000005768	FUBP1	97	96.267	ENSCAFG00000020361	FUBP1	99	96.267	Canis_familiaris
ENSFALG00000005768	FUBP1	92	96.849	ENSTSYG00000000148	FUBP1	99	96.849	Carlito_syrichta
ENSFALG00000005768	FUBP1	56	98.168	ENSCAPG00000011052	-	67	98.168	Cavia_aperea
ENSFALG00000005768	FUBP1	98	95.679	ENSCPOG00000002757	FUBP1	98	96.599	Cavia_porcellus
ENSFALG00000005768	FUBP1	72	92.593	ENSCCAG00000036537	FUBP1	88	92.593	Cebus_capucinus
ENSFALG00000005768	FUBP1	69	97.137	ENSCATG00000042126	FUBP1	70	96.476	Cercocebus_atys
ENSFALG00000005768	FUBP1	69	97.357	ENSCLAG00000005621	FUBP1	100	96.178	Chinchilla_lanigera
ENSFALG00000005768	FUBP1	69	97.137	ENSCSAG00000001402	FUBP1	70	96.476	Chlorocebus_sabaeus
ENSFALG00000005768	FUBP1	98	96.124	ENSCHOG00000008177	FUBP1	98	96.124	Choloepus_hoffmanni
ENSFALG00000005768	FUBP1	69	97.118	ENSCGRG00001007103	Fubp1	70	97.124	Cricetulus_griseus_chok1gshd
ENSFALG00000005768	FUBP1	92	96.535	ENSCGRG00000003372	Fubp1	99	96.535	Cricetulus_griseus_crigri
ENSFALG00000005768	FUBP1	97	71.296	ENSCSEG00000021412	fubp1	69	77.827	Cynoglossus_semilaevis
ENSFALG00000005768	FUBP1	98	70.149	ENSCVAG00000014487	fubp1	60	85.269	Cyprinodon_variegatus
ENSFALG00000005768	FUBP1	68	76.957	ENSDARG00000029248	fubp1	70	76.840	Danio_rerio
ENSFALG00000005768	FUBP1	82	70.513	ENSDNOG00000034565	-	83	71.951	Dasypus_novemcinctus
ENSFALG00000005768	FUBP1	97	91.745	ENSDORG00000016534	Fubp1	69	96.476	Dipodomys_ordii
ENSFALG00000005768	FUBP1	75	96.802	ENSETEG00000000948	-	58	96.802	Echinops_telfairi
ENSFALG00000005768	FUBP1	81	46.372	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSFALG00000005768	FUBP1	74	89.583	ENSEEUG00000001287	FUBP1	90	89.583	Erinaceus_europaeus
ENSFALG00000005768	FUBP1	97	69.207	ENSELUG00000007990	fubp1	92	74.783	Esox_lucius
ENSFALG00000005768	FUBP1	69	97.137	ENSFDAG00000014210	FUBP1	100	95.918	Fukomys_damarensis
ENSFALG00000005768	FUBP1	97	72.222	ENSFHEG00000005230	fubp1	70	79.379	Fundulus_heteroclitus
ENSFALG00000005768	FUBP1	97	67.028	ENSGMOG00000003370	fubp1	70	70.199	Gadus_morhua
ENSFALG00000005768	FUBP1	97	99.376	ENSGALG00000008939	FUBP1	99	99.376	Gallus_gallus
ENSFALG00000005768	FUBP1	97	70.713	ENSGAFG00000020972	fubp1	91	78.539	Gambusia_affinis
ENSFALG00000005768	FUBP1	97	71.057	ENSGACG00000016563	fubp1	70	76.805	Gasterosteus_aculeatus
ENSFALG00000005768	FUBP1	100	70.597	ENSHBUG00000009835	fubp1	85	77.434	Haplochromis_burtoni
ENSFALG00000005768	FUBP1	70	90.217	ENSHGLG00000002808	-	72	89.451	Heterocephalus_glaber_female
ENSFALG00000005768	FUBP1	98	95.525	ENSHGLG00000008415	-	100	96.178	Heterocephalus_glaber_female
ENSFALG00000005768	FUBP1	70	91.087	ENSHGLG00100001414	-	72	90.110	Heterocephalus_glaber_male
ENSFALG00000005768	FUBP1	98	95.525	ENSHGLG00100003417	-	99	95.820	Heterocephalus_glaber_male
ENSFALG00000005768	FUBP1	97	69.033	ENSHCOG00000000910	fubp1	70	75.431	Hippocampus_comes
ENSFALG00000005768	FUBP1	97	72.282	ENSIPUG00000009896	fubp1	70	77.753	Ictalurus_punctatus
ENSFALG00000005768	FUBP1	98	96.267	ENSSTOG00000014312	FUBP1	100	96.267	Ictidomys_tridecemlineatus
ENSFALG00000005768	FUBP1	97	96.124	ENSJJAG00000020069	Fubp1	100	95.918	Jaculus_jaculus
ENSFALG00000005768	FUBP1	97	71.561	ENSKMAG00000018897	fubp1	69	77.827	Kryptolebias_marmoratus
ENSFALG00000005768	FUBP1	98	67.006	ENSLBEG00000012700	fubp1	72	75.693	Labrus_bergylta
ENSFALG00000005768	FUBP1	96	70.475	ENSLOCG00000003745	fubp1	92	74.280	Lepisosteus_oculatus
ENSFALG00000005768	FUBP1	83	96.029	ENSLAFG00000003273	FUBP1	99	96.029	Loxodonta_africana
ENSFALG00000005768	FUBP1	69	97.351	ENSMFAG00000031825	FUBP1	70	96.689	Macaca_fascicularis
ENSFALG00000005768	FUBP1	99	96.189	ENSMMUG00000002899	FUBP1	98	96.189	Macaca_mulatta
ENSFALG00000005768	FUBP1	98	89.165	ENSMNEG00000045212	FUBP1	70	96.476	Macaca_nemestrina
ENSFALG00000005768	FUBP1	97	71.827	ENSMZEG00005024298	fubp1	70	79.379	Maylandia_zebra
ENSFALG00000005768	FUBP1	92	99.337	ENSMGAG00000009424	FUBP1	99	99.337	Meleagris_gallopavo
ENSFALG00000005768	FUBP1	98	95.370	ENSMAUG00000016428	Fubp1	98	96.599	Mesocricetus_auratus
ENSFALG00000005768	FUBP1	97	94.688	ENSMOCG00000014751	Fubp1	98	95.918	Microtus_ochrogaster
ENSFALG00000005768	FUBP1	83	74.317	ENSMMOG00000019463	fubp1	64	83.099	Mola_mola
ENSFALG00000005768	FUBP1	65	87.696	ENSMODG00000020804	FUBP1	70	87.696	Monodelphis_domestica
ENSFALG00000005768	FUBP1	97	71.252	ENSMALG00000015173	fubp1	70	77.827	Monopterus_albus
ENSFALG00000005768	FUBP1	98	95.956	MGP_CAROLIEiJ_G0025740	Fubp1	99	96.762	Mus_caroli
ENSFALG00000005768	FUBP1	98	94.264	ENSMUSG00000028034	Fubp1	99	96.571	Mus_musculus
ENSFALG00000005768	FUBP1	98	96.112	MGP_PahariEiJ_G0027191	Fubp1	99	96.952	Mus_pahari
ENSFALG00000005768	FUBP1	98	94.419	MGP_SPRETEiJ_G0026693	Fubp1	99	96.762	Mus_spretus
ENSFALG00000005768	FUBP1	69	92.469	ENSMLUG00000014802	FUBP1	71	92.469	Myotis_lucifugus
ENSFALG00000005768	FUBP1	69	91.372	ENSNGAG00000014302	Fubp1	98	95.918	Nannospalax_galili
ENSFALG00000005768	FUBP1	97	69.579	ENSNBRG00000015099	fubp1	72	78.492	Neolamprologus_brichardi
ENSFALG00000005768	FUBP1	97	90.853	ENSNLEG00000009772	FUBP1	70	91.009	Nomascus_leucogenys
ENSFALG00000005768	FUBP1	88	93.233	ENSOPRG00000001175	FUBP1	89	91.852	Ochotona_princeps
ENSFALG00000005768	FUBP1	98	95.969	ENSODEG00000002600	-	100	95.918	Octodon_degus
ENSFALG00000005768	FUBP1	98	65.211	ENSODEG00000003657	-	71	67.184	Octodon_degus
ENSFALG00000005768	FUBP1	100	70.597	ENSONIG00000018381	fubp1	69	79.379	Oreochromis_niloticus
ENSFALG00000005768	FUBP1	87	92.231	ENSOANG00000009777	FUBP1	99	92.066	Ornithorhynchus_anatinus
ENSFALG00000005768	FUBP1	98	68.694	ENSORLG00020005908	fubp1	70	77.384	Oryzias_latipes_hni
ENSFALG00000005768	FUBP1	97	68.796	ENSORLG00015008779	fubp1	70	77.384	Oryzias_latipes_hsok
ENSFALG00000005768	FUBP1	68	78.174	ENSOMEG00000021943	fubp1	70	75.610	Oryzias_melastigma
ENSFALG00000005768	FUBP1	69	92.276	ENSOGAG00000014233	FUBP1	71	91.649	Otolemur_garnettii
ENSFALG00000005768	FUBP1	69	97.572	ENSOARG00000013259	FUBP1	99	91.004	Ovis_aries
ENSFALG00000005768	FUBP1	98	95.969	ENSPPRG00000000413	FUBP1	99	96.267	Panthera_pardus
ENSFALG00000005768	FUBP1	98	95.969	ENSPTIG00000019450	FUBP1	99	96.267	Panthera_tigris_altaica
ENSFALG00000005768	FUBP1	93	97.537	ENSPSIG00000012965	FUBP1	99	98.475	Pelodiscus_sinensis
ENSFALG00000005768	FUBP1	98	70.724	ENSPMGG00000009060	fubp1	71	76.368	Periophthalmus_magnuspinnatus
ENSFALG00000005768	FUBP1	98	95.975	ENSPEMG00000021802	Fubp1	100	96.599	Peromyscus_maniculatus_bairdii
ENSFALG00000005768	FUBP1	56	61.803	ENSPMAG00000001644	-	90	63.063	Petromyzon_marinus
ENSFALG00000005768	FUBP1	97	70.093	ENSPLAG00000021170	fubp1	72	79.379	Poecilia_latipinna
ENSFALG00000005768	FUBP1	98	72.939	ENSPMEG00000004747	fubp1	73	79.379	Poecilia_mexicana
ENSFALG00000005768	FUBP1	98	72.265	ENSPREG00000017911	fubp1	70	79.379	Poecilia_reticulata
ENSFALG00000005768	FUBP1	75	97.397	ENSPPYG00000001219	-	70	97.397	Pongo_abelii
ENSFALG00000005768	FUBP1	98	96.273	ENSPCAG00000012617	FUBP1	98	96.273	Procavia_capensis
ENSFALG00000005768	FUBP1	98	95.969	ENSPCOG00000024974	FUBP1	99	96.267	Propithecus_coquereli
ENSFALG00000005768	FUBP1	69	90.969	ENSPVAG00000014637	FUBP1	69	90.308	Pteropus_vampyrus
ENSFALG00000005768	FUBP1	97	71.803	ENSPNYG00000004552	fubp1	73	78.936	Pundamilia_nyererei
ENSFALG00000005768	FUBP1	98	71.620	ENSPNAG00000016207	fubp1	87	77.391	Pygocentrus_nattereri
ENSFALG00000005768	FUBP1	97	94.557	ENSRNOG00000043370	Fubp1	70	97.339	Rattus_norvegicus
ENSFALG00000005768	FUBP1	69	97.137	ENSRBIG00000042950	FUBP1	70	96.476	Rhinopithecus_bieti
ENSFALG00000005768	FUBP1	69	97.137	ENSRROG00000043534	FUBP1	70	96.476	Rhinopithecus_roxellana
ENSFALG00000005768	FUBP1	98	95.969	ENSSBOG00000027299	FUBP1	99	96.267	Saimiri_boliviensis_boliviensis
ENSFALG00000005768	FUBP1	92	95.731	ENSSHAG00000005367	FUBP1	99	97.278	Sarcophilus_harrisii
ENSFALG00000005768	FUBP1	96	73.155	ENSSFOG00015010213	fubp1	70	79.029	Scleropages_formosus
ENSFALG00000005768	FUBP1	100	71.111	ENSSDUG00000007383	fubp1	68	77.273	Seriola_dumerili
ENSFALG00000005768	FUBP1	97	70.517	ENSSLDG00000022863	fubp1	72	77.093	Seriola_lalandi_dorsalis
ENSFALG00000005768	FUBP1	69	98.851	ENSSARG00000011730	FUBP1	56	98.851	Sorex_araneus
ENSFALG00000005768	FUBP1	99	89.185	ENSSPUG00000008389	FUBP1	99	88.922	Sphenodon_punctatus
ENSFALG00000005768	FUBP1	98	72.488	ENSSPAG00000010161	fubp1	69	78.271	Stegastes_partitus
ENSFALG00000005768	FUBP1	92	99.013	ENSTGUG00000006841	FUBP1	100	99.013	Taeniopygia_guttata
ENSFALG00000005768	FUBP1	80	99.405	ENSTBEG00000017333	FUBP1	65	99.405	Tupaia_belangeri
ENSFALG00000005768	FUBP1	98	95.969	ENSTTRG00000000096	FUBP1	98	95.969	Tursiops_truncatus
ENSFALG00000005768	FUBP1	98	95.969	ENSVPAG00000004709	FUBP1	99	95.969	Vicugna_pacos
ENSFALG00000005768	FUBP1	97	70.047	ENSXCOG00000019354	fubp1	72	77.827	Xiphophorus_couchianus
ENSFALG00000005768	FUBP1	95	72.640	ENSXMAG00000007168	fubp1	73	79.157	Xiphophorus_maculatus