EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000005816 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 15325 bases
Position: chrJH603363.1:587067-602391
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000006070	CMS1	PF14617.6	9.9e-33	1	1
ENSFALP00000006070	DEAD	PF00270.29	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000006097	CMSS1-201	1550	-	ENSFALP00000006070	237 (aa)	-	U3JTG6

Gene Model

Click here to download ENSFALG00000005816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000005816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000005816	CMSS1	100	64.135	ENSG00000184220	CMSS1	98	68.750	Homo_sapiens
ENSFALG00000005816	CMSS1	85	62.376	ENSAPOG00000010604	cmss1	96	59.494	Acanthochromis_polyacanthus
ENSFALG00000005816	CMSS1	97	64.783	ENSAMEG00000004092	CMSS1	92	63.445	Ailuropoda_melanoleuca
ENSFALG00000005816	CMSS1	85	53.465	ENSACIG00000021854	cmss1	82	52.055	Amphilophus_citrinellus
ENSFALG00000005816	CMSS1	85	61.386	ENSAOCG00000013361	cmss1	70	61.386	Amphiprion_ocellaris
ENSFALG00000005816	CMSS1	85	61.386	ENSAPEG00000005829	cmss1	70	61.386	Amphiprion_percula
ENSFALG00000005816	CMSS1	87	62.621	ENSATEG00000008209	cmss1	79	58.952	Anabas_testudineus
ENSFALG00000005816	CMSS1	97	90.870	ENSAPLG00000010542	CMSS1	100	90.870	Anas_platyrhynchos
ENSFALG00000005816	CMSS1	99	70.000	ENSACAG00000011065	CMSS1	88	70.000	Anolis_carolinensis
ENSFALG00000005816	CMSS1	100	64.557	ENSANAG00000023565	CMSS1	90	64.557	Aotus_nancymaae
ENSFALG00000005816	CMSS1	85	62.376	ENSACLG00000027294	cmss1	69	62.376	Astatotilapia_calliptera
ENSFALG00000005816	CMSS1	95	56.522	ENSAMXG00000002046	cmss1	78	56.957	Astyanax_mexicanus
ENSFALG00000005816	CMSS1	100	64.135	ENSBTAG00000013663	CMSS1	86	64.135	Bos_taurus
ENSFALG00000005816	CMSS1	100	64.435	ENSCJAG00000000610	CMSS1	91	64.854	Callithrix_jacchus
ENSFALG00000005816	CMSS1	100	63.713	ENSCAFG00000009230	CMSS1	86	63.713	Canis_familiaris
ENSFALG00000005816	CMSS1	97	65.066	ENSCAFG00020009464	-	86	63.713	Canis_lupus_dingo
ENSFALG00000005816	CMSS1	85	63.861	ENSCAFG00020024156	-	62	63.861	Canis_lupus_dingo
ENSFALG00000005816	CMSS1	100	63.713	ENSCHIG00000013003	CMSS1	86	63.713	Capra_hircus
ENSFALG00000005816	CMSS1	100	62.762	ENSTSYG00000009266	CMSS1	92	62.762	Carlito_syrichta
ENSFALG00000005816	CMSS1	94	56.951	ENSCAPG00000013584	CMSS1	87	61.290	Cavia_aperea
ENSFALG00000005816	CMSS1	100	65.823	ENSCPOG00000014680	CMSS1	85	65.823	Cavia_porcellus
ENSFALG00000005816	CMSS1	100	65.401	ENSCCAG00000034685	CMSS1	90	65.401	Cebus_capucinus
ENSFALG00000005816	CMSS1	100	64.979	ENSCATG00000031980	CMSS1	91	64.979	Cercocebus_atys
ENSFALG00000005816	CMSS1	98	66.524	ENSCLAG00000011241	CMSS1	100	66.524	Chinchilla_lanigera
ENSFALG00000005816	CMSS1	100	64.979	ENSCSAG00000006024	CMSS1	97	64.979	Chlorocebus_sabaeus
ENSFALG00000005816	CMSS1	100	46.444	ENSCHOG00000012098	CMSS1	87	46.444	Choloepus_hoffmanni
ENSFALG00000005816	CMSS1	94	38.938	ENSCING00000014848	-	99	41.711	Ciona_intestinalis
ENSFALG00000005816	CMSS1	53	39.683	ENSCSAVG00000002309	-	99	39.683	Ciona_savignyi
ENSFALG00000005816	CMSS1	100	64.557	ENSCANG00000031337	CMSS1	91	64.557	Colobus_angolensis_palliatus
ENSFALG00000005816	CMSS1	100	64.979	ENSCGRG00001014305	Cmss1	85	64.979	Cricetulus_griseus_chok1gshd
ENSFALG00000005816	CMSS1	100	65.401	ENSCGRG00000006722	Cmss1	92	65.401	Cricetulus_griseus_crigri
ENSFALG00000005816	CMSS1	85	65.842	ENSCSEG00000004958	cmss1	69	65.842	Cynoglossus_semilaevis
ENSFALG00000005816	CMSS1	85	61.881	ENSCVAG00000005039	cmss1	70	61.881	Cyprinodon_variegatus
ENSFALG00000005816	CMSS1	95	54.113	ENSDARG00000112579	cmss1	79	54.113	Danio_rerio
ENSFALG00000005816	CMSS1	97	64.629	ENSDNOG00000040418	CMSS1	83	64.629	Dasypus_novemcinctus
ENSFALG00000005816	CMSS1	100	64.017	ENSDORG00000010461	Cmss1	86	64.017	Dipodomys_ordii
ENSFALG00000005816	CMSS1	56	46.970	ENSEBUG00000002156	-	96	46.970	Eptatretus_burgeri
ENSFALG00000005816	CMSS1	98	64.655	ENSEASG00005010966	CMSS1	99	64.840	Equus_asinus_asinus
ENSFALG00000005816	CMSS1	100	63.180	ENSECAG00000015662	CMSS1	99	64.602	Equus_caballus
ENSFALG00000005816	CMSS1	96	46.491	ENSEEUG00000007624	-	82	46.930	Erinaceus_europaeus
ENSFALG00000005816	CMSS1	85	61.386	ENSELUG00000019459	cmss1	75	59.292	Esox_lucius
ENSFALG00000005816	CMSS1	100	64.017	ENSFCAG00000044577	CMSS1	86	64.017	Felis_catus
ENSFALG00000005816	CMSS1	96	64.474	ENSFDAG00000012577	CMSS1	100	64.474	Fukomys_damarensis
ENSFALG00000005816	CMSS1	95	56.710	ENSFHEG00000012008	cmss1	96	57.447	Fundulus_heteroclitus
ENSFALG00000005816	CMSS1	85	59.406	ENSGMOG00000016729	cmss1	72	59.406	Gadus_morhua
ENSFALG00000005816	CMSS1	97	88.210	ENSGALG00000015267	CMSS1	88	88.210	Gallus_gallus
ENSFALG00000005816	CMSS1	87	61.353	ENSGAFG00000021217	cmss1	77	60.891	Gambusia_affinis
ENSFALG00000005816	CMSS1	92	59.633	ENSGACG00000002798	cmss1	78	59.633	Gasterosteus_aculeatus
ENSFALG00000005816	CMSS1	97	78.603	ENSGAGG00000019861	CMSS1	89	78.603	Gopherus_agassizii
ENSFALG00000005816	CMSS1	100	64.979	ENSGGOG00000014125	CMSS1	91	64.979	Gorilla_gorilla
ENSFALG00000005816	CMSS1	85	62.376	ENSHBUG00000008431	cmss1	71	62.376	Haplochromis_burtoni
ENSFALG00000005816	CMSS1	95	67.257	ENSHGLG00000019481	CMSS1	92	67.257	Heterocephalus_glaber_female
ENSFALG00000005816	CMSS1	95	67.257	ENSHGLG00100010314	CMSS1	91	67.257	Heterocephalus_glaber_male
ENSFALG00000005816	CMSS1	95	61.504	ENSHCOG00000003222	cmss1	77	61.062	Hippocampus_comes
ENSFALG00000005816	CMSS1	93	60.181	ENSIPUG00000011591	cmss1	76	60.181	Ictalurus_punctatus
ENSFALG00000005816	CMSS1	100	63.713	ENSSTOG00000019366	CMSS1	85	63.713	Ictidomys_tridecemlineatus
ENSFALG00000005816	CMSS1	100	65.401	ENSJJAG00000014894	Cmss1	90	67.327	Jaculus_jaculus
ENSFALG00000005816	CMSS1	85	57.426	ENSKMAG00000002390	cmss1	81	57.426	Kryptolebias_marmoratus
ENSFALG00000005816	CMSS1	85	60.591	ENSLBEG00000006298	cmss1	83	60.591	Labrus_bergylta
ENSFALG00000005816	CMSS1	96	66.087	ENSLACG00000009293	CMSS1	100	66.087	Latimeria_chalumnae
ENSFALG00000005816	CMSS1	96	58.772	ENSLOCG00000009391	cmss1	81	58.772	Lepisosteus_oculatus
ENSFALG00000005816	CMSS1	96	65.351	ENSLAFG00000017509	CMSS1	100	65.351	Loxodonta_africana
ENSFALG00000005816	CMSS1	100	64.979	ENSMFAG00000045006	CMSS1	91	64.979	Macaca_fascicularis
ENSFALG00000005816	CMSS1	100	64.557	ENSMMUG00000002939	CMSS1	97	65.297	Macaca_mulatta
ENSFALG00000005816	CMSS1	100	64.979	ENSMNEG00000031315	CMSS1	91	64.979	Macaca_nemestrina
ENSFALG00000005816	CMSS1	100	65.401	ENSMLEG00000033660	CMSS1	91	65.401	Mandrillus_leucophaeus
ENSFALG00000005816	CMSS1	85	62.376	ENSMAMG00000017176	cmss1	70	62.376	Mastacembelus_armatus
ENSFALG00000005816	CMSS1	85	62.376	ENSMZEG00005021886	cmss1	69	62.376	Maylandia_zebra
ENSFALG00000005816	CMSS1	96	87.719	ENSMGAG00000014360	CMSS1	100	87.719	Meleagris_gallopavo
ENSFALG00000005816	CMSS1	100	44.726	ENSMAUG00000020609	Cmss1	82	43.038	Mesocricetus_auratus
ENSFALG00000005816	CMSS1	100	63.713	ENSMICG00000048977	CMSS1	91	63.713	Microcebus_murinus
ENSFALG00000005816	CMSS1	97	67.686	ENSMOCG00000021937	Cmss1	83	67.686	Microtus_ochrogaster
ENSFALG00000005816	CMSS1	85	60.396	ENSMMOG00000019794	cmss1	84	60.396	Mola_mola
ENSFALG00000005816	CMSS1	97	68.696	ENSMODG00000002275	CMSS1	87	68.696	Monodelphis_domestica
ENSFALG00000005816	CMSS1	85	63.861	ENSMALG00000004250	cmss1	69	63.861	Monopterus_albus
ENSFALG00000005816	CMSS1	97	66.957	MGP_CAROLIEiJ_G0020824	Cmss1	86	65.546	Mus_caroli
ENSFALG00000005816	CMSS1	97	66.957	ENSMUSG00000022748	Cmss1	86	65.546	Mus_musculus
ENSFALG00000005816	CMSS1	97	66.522	MGP_PahariEiJ_G0016524	Cmss1	83	66.522	Mus_pahari
ENSFALG00000005816	CMSS1	97	66.957	MGP_SPRETEiJ_G0021724	Cmss1	83	66.957	Mus_spretus
ENSFALG00000005816	CMSS1	99	64.286	ENSMPUG00000011324	CMSS1	92	64.286	Mustela_putorius_furo
ENSFALG00000005816	CMSS1	100	64.435	ENSMLUG00000001131	CMSS1	91	64.435	Myotis_lucifugus
ENSFALG00000005816	CMSS1	100	64.979	ENSNGAG00000020316	Cmss1	85	64.979	Nannospalax_galili
ENSFALG00000005816	CMSS1	85	62.376	ENSNBRG00000003095	cmss1	69	62.376	Neolamprologus_brichardi
ENSFALG00000005816	CMSS1	100	64.979	ENSNLEG00000034172	CMSS1	91	64.979	Nomascus_leucogenys
ENSFALG00000005816	CMSS1	96	60.088	ENSMEUG00000014505	CMSS1	100	60.088	Notamacropus_eugenii
ENSFALG00000005816	CMSS1	100	64.557	ENSOPRG00000002986	CMSS1	85	64.557	Ochotona_princeps
ENSFALG00000005816	CMSS1	100	54.852	ENSODEG00000001853	-	85	54.852	Octodon_degus
ENSFALG00000005816	CMSS1	100	65.401	ENSODEG00000005226	-	85	65.401	Octodon_degus
ENSFALG00000005816	CMSS1	96	64.035	ENSODEG00000003558	-	84	64.035	Octodon_degus
ENSFALG00000005816	CMSS1	92	55.046	ENSODEG00000009446	-	85	55.046	Octodon_degus
ENSFALG00000005816	CMSS1	85	61.386	ENSONIG00000006678	cmss1	77	61.386	Oreochromis_niloticus
ENSFALG00000005816	CMSS1	97	73.362	ENSOANG00000007529	CMSS1	100	72.103	Ornithorhynchus_anatinus
ENSFALG00000005816	CMSS1	100	63.598	ENSOCUG00000025366	CMSS1	87	63.598	Oryctolagus_cuniculus
ENSFALG00000005816	CMSS1	85	62.376	ENSORLG00000020340	cmss1	71	62.376	Oryzias_latipes
ENSFALG00000005816	CMSS1	97	52.838	ENSORLG00020012235	cmss1	85	54.950	Oryzias_latipes_hni
ENSFALG00000005816	CMSS1	85	55.446	ENSORLG00015015551	cmss1	75	55.446	Oryzias_latipes_hsok
ENSFALG00000005816	CMSS1	85	61.386	ENSOMEG00000012555	cmss1	70	61.386	Oryzias_melastigma
ENSFALG00000005816	CMSS1	96	65.351	ENSOGAG00000002045	CMSS1	100	65.351	Otolemur_garnettii
ENSFALG00000005816	CMSS1	100	63.866	ENSOARG00000017899	CMSS1	82	63.866	Ovis_aries
ENSFALG00000005816	CMSS1	100	64.979	ENSPPAG00000038515	CMSS1	87	64.979	Pan_paniscus
ENSFALG00000005816	CMSS1	100	64.435	ENSPPRG00000016767	CMSS1	86	64.435	Panthera_pardus
ENSFALG00000005816	CMSS1	97	66.376	ENSPTIG00000018274	CMSS1	82	66.376	Panthera_tigris_altaica
ENSFALG00000005816	CMSS1	99	64.407	ENSPTRG00000015157	CMSS1	96	64.407	Pan_troglodytes
ENSFALG00000005816	CMSS1	96	65.789	ENSPANG00000019980	CMSS1	91	65.789	Papio_anubis
ENSFALG00000005816	CMSS1	95	63.793	ENSPKIG00000012609	cmss1	85	63.793	Paramormyrops_kingsleyae
ENSFALG00000005816	CMSS1	97	81.659	ENSPSIG00000003849	CMSS1	100	81.659	Pelodiscus_sinensis
ENSFALG00000005816	CMSS1	93	59.735	ENSPMGG00000010286	cmss1	97	61.062	Periophthalmus_magnuspinnatus
ENSFALG00000005816	CMSS1	100	64.979	ENSPEMG00000016384	Cmss1	85	64.979	Peromyscus_maniculatus_bairdii
ENSFALG00000005816	CMSS1	86	53.922	ENSPMAG00000001146	cmss1	99	54.455	Petromyzon_marinus
ENSFALG00000005816	CMSS1	100	69.038	ENSPCIG00000015656	CMSS1	91	69.038	Phascolarctos_cinereus
ENSFALG00000005816	CMSS1	85	59.901	ENSPFOG00000016849	cmss1	71	59.901	Poecilia_formosa
ENSFALG00000005816	CMSS1	85	59.406	ENSPLAG00000008323	cmss1	71	59.406	Poecilia_latipinna
ENSFALG00000005816	CMSS1	85	59.901	ENSPMEG00000021020	cmss1	70	59.901	Poecilia_mexicana
ENSFALG00000005816	CMSS1	85	58.911	ENSPREG00000007618	cmss1	69	58.911	Poecilia_reticulata
ENSFALG00000005816	CMSS1	100	65.823	ENSPPYG00000013606	CMSS1	87	65.823	Pongo_abelii
ENSFALG00000005816	CMSS1	100	64.979	ENSPCOG00000020035	CMSS1	91	64.979	Propithecus_coquereli
ENSFALG00000005816	CMSS1	100	55.649	ENSPVAG00000017031	CMSS1	86	55.649	Pteropus_vampyrus
ENSFALG00000005816	CMSS1	74	65.341	ENSPNYG00000013428	cmss1	65	65.341	Pundamilia_nyererei
ENSFALG00000005816	CMSS1	95	56.522	ENSPNAG00000007912	cmss1	78	57.391	Pygocentrus_nattereri
ENSFALG00000005816	CMSS1	97	66.087	ENSRNOG00000027888	Cmss1	89	66.087	Rattus_norvegicus
ENSFALG00000005816	CMSS1	100	64.557	ENSRBIG00000037931	CMSS1	91	64.557	Rhinopithecus_bieti
ENSFALG00000005816	CMSS1	100	64.557	ENSRROG00000042910	CMSS1	91	64.557	Rhinopithecus_roxellana
ENSFALG00000005816	CMSS1	100	64.135	ENSSBOG00000030980	CMSS1	90	64.135	Saimiri_boliviensis_boliviensis
ENSFALG00000005816	CMSS1	97	70.130	ENSSHAG00000009321	CMSS1	91	70.130	Sarcophilus_harrisii
ENSFALG00000005816	CMSS1	95	63.478	ENSSFOG00015001509	cmss1	79	63.478	Scleropages_formosus
ENSFALG00000005816	CMSS1	85	64.356	ENSSMAG00000001653	cmss1	69	64.356	Scophthalmus_maximus
ENSFALG00000005816	CMSS1	97	59.914	ENSSDUG00000007719	cmss1	81	60.345	Seriola_dumerili
ENSFALG00000005816	CMSS1	87	64.251	ENSSLDG00000012300	cmss1	76	59.016	Seriola_lalandi_dorsalis
ENSFALG00000005816	CMSS1	97	55.459	ENSSARG00000003584	CMSS1	82	55.459	Sorex_araneus
ENSFALG00000005816	CMSS1	95	78.319	ENSSPUG00000003865	CMSS1	100	78.319	Sphenodon_punctatus
ENSFALG00000005816	CMSS1	87	64.563	ENSSPAG00000019182	cmss1	63	64.356	Stegastes_partitus
ENSFALG00000005816	CMSS1	100	64.017	ENSSSCG00000011970	CMSS1	86	64.017	Sus_scrofa
ENSFALG00000005816	CMSS1	97	94.760	ENSTGUG00000013635	CMSS1	100	94.760	Taeniopygia_guttata
ENSFALG00000005816	CMSS1	85	62.871	ENSTRUG00000015265	cmss1	72	62.871	Takifugu_rubripes
ENSFALG00000005816	CMSS1	85	57.426	ENSTNIG00000002880	cmss1	73	57.426	Tetraodon_nigroviridis
ENSFALG00000005816	CMSS1	96	46.491	ENSTBEG00000016722	CMSS1	81	46.491	Tupaia_belangeri
ENSFALG00000005816	CMSS1	100	61.088	ENSTTRG00000001562	CMSS1	85	61.088	Tursiops_truncatus
ENSFALG00000005816	CMSS1	97	65.502	ENSUAMG00000024209	CMSS1	100	65.022	Ursus_americanus
ENSFALG00000005816	CMSS1	100	63.180	ENSUMAG00000001983	CMSS1	92	63.180	Ursus_maritimus
ENSFALG00000005816	CMSS1	96	52.193	ENSVPAG00000000263	CMSS1	57	67.500	Vicugna_pacos
ENSFALG00000005816	CMSS1	85	65.842	ENSVVUG00000007776	-	80	65.842	Vulpes_vulpes
ENSFALG00000005816	CMSS1	97	65.502	ENSVVUG00000021647	-	96	64.135	Vulpes_vulpes
ENSFALG00000005816	CMSS1	92	64.679	ENSXETG00000011858	cmss1	78	64.679	Xenopus_tropicalis
ENSFALG00000005816	CMSS1	88	60.577	ENSXCOG00000018724	cmss1	69	60.396	Xiphophorus_couchianus
ENSFALG00000005816	CMSS1	88	60.577	ENSXMAG00000011243	cmss1	76	60.396	Xiphophorus_maculatus