EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000006532 (Gene tree)
Gene ID: -
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 8569 bases
Position: chrJH603226.1:4892037-4900605
Accession: 101820564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000006811	AARP2CN	PF08142.12	2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000006840	TSR1-201	5026	-	ENSFALP00000006811	810 (aa)	XP_005056855	U3JVK7

Gene Model

Click here to download ENSFALG00000006532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000006532	TSR1	99	68.804	ENSG00000167721	TSR1	99	67.901	Homo_sapiens
ENSFALG00000006532	TSR1	99	57.464	ENSAPOG00000020891	tsr1	100	58.214	Acanthochromis_polyacanthus
ENSFALG00000006532	TSR1	99	67.726	ENSAMEG00000007599	TSR1	99	68.093	Ailuropoda_melanoleuca
ENSFALG00000006532	TSR1	99	57.920	ENSACIG00000007090	tsr1	100	58.283	Amphilophus_citrinellus
ENSFALG00000006532	TSR1	99	56.872	ENSAOCG00000023284	tsr1	100	58.014	Amphiprion_ocellaris
ENSFALG00000006532	TSR1	93	57.814	ENSAPEG00000008452	tsr1	100	59.050	Amphiprion_percula
ENSFALG00000006532	TSR1	99	57.515	ENSATEG00000021961	tsr1	100	57.870	Anabas_testudineus
ENSFALG00000006532	TSR1	91	85.965	ENSAPLG00000013422	TSR1	100	86.406	Anas_platyrhynchos
ENSFALG00000006532	TSR1	71	63.636	ENSACAG00000000859	TSR1	92	63.402	Anolis_carolinensis
ENSFALG00000006532	TSR1	99	69.259	ENSANAG00000031071	TSR1	99	68.428	Aotus_nancymaae
ENSFALG00000006532	TSR1	99	57.623	ENSACLG00000007595	tsr1	99	58.223	Astatotilapia_calliptera
ENSFALG00000006532	TSR1	50	53.521	ENSAMXG00000008470	tsr1	91	53.563	Astyanax_mexicanus
ENSFALG00000006532	TSR1	99	70.813	ENSBTAG00000004225	TSR1	99	70.197	Bos_taurus
ENSFALG00000006532	TSR1	97	41.512	WBGene00006497	tag-151	96	41.264	Caenorhabditis_elegans
ENSFALG00000006532	TSR1	99	68.642	ENSCJAG00000012456	TSR1	99	67.813	Callithrix_jacchus
ENSFALG00000006532	TSR1	90	66.757	ENSCAFG00000019273	-	100	70.482	Canis_familiaris
ENSFALG00000006532	TSR1	99	68.350	ENSCAFG00000002106	-	99	67.694	Canis_familiaris
ENSFALG00000006532	TSR1	99	68.103	ENSCAFG00020009728	TSR1	99	67.448	Canis_lupus_dingo
ENSFALG00000006532	TSR1	99	70.777	ENSCHIG00000023935	TSR1	99	70.160	Capra_hircus
ENSFALG00000006532	TSR1	99	68.064	ENSTSYG00000005468	TSR1	99	67.818	Carlito_syrichta
ENSFALG00000006532	TSR1	92	68.484	ENSCPOG00000014833	TSR1	99	67.686	Cavia_porcellus
ENSFALG00000006532	TSR1	92	68.750	ENSCCAG00000028962	TSR1	98	67.857	Cebus_capucinus
ENSFALG00000006532	TSR1	98	69.701	ENSCATG00000044262	TSR1	99	68.944	Cercocebus_atys
ENSFALG00000006532	TSR1	99	69.506	ENSCLAG00000005567	TSR1	99	68.889	Chinchilla_lanigera
ENSFALG00000006532	TSR1	98	69.576	ENSCSAG00000013788	TSR1	99	68.820	Chlorocebus_sabaeus
ENSFALG00000006532	TSR1	98	80.726	ENSCPBG00000020363	TSR1	98	79.433	Chrysemys_picta_bellii
ENSFALG00000006532	TSR1	97	46.163	ENSCING00000020658	-	100	46.040	Ciona_intestinalis
ENSFALG00000006532	TSR1	97	46.366	ENSCSAVG00000001875	-	99	46.366	Ciona_savignyi
ENSFALG00000006532	TSR1	99	64.480	ENSCANG00000033056	TSR1	99	63.738	Colobus_angolensis_palliatus
ENSFALG00000006532	TSR1	99	68.889	ENSCGRG00001023942	Tsr1	99	68.765	Cricetulus_griseus_chok1gshd
ENSFALG00000006532	TSR1	99	65.056	ENSCGRG00000013015	Tsr1	51	63.255	Cricetulus_griseus_crigri
ENSFALG00000006532	TSR1	99	55.952	ENSCSEG00000013009	tsr1	99	57.920	Cynoglossus_semilaevis
ENSFALG00000006532	TSR1	99	58.131	ENSCVAG00000000506	tsr1	99	58.495	Cyprinodon_variegatus
ENSFALG00000006532	TSR1	99	59.371	ENSDARG00000007744	tsr1	100	59.492	Danio_rerio
ENSFALG00000006532	TSR1	99	69.544	ENSDNOG00000004715	TSR1	99	72.424	Dasypus_novemcinctus
ENSFALG00000006532	TSR1	99	69.259	ENSDORG00000016371	-	99	68.765	Dipodomys_ordii
ENSFALG00000006532	TSR1	96	60.486	ENSDORG00000023234	-	99	59.847	Dipodomys_ordii
ENSFALG00000006532	TSR1	97	45.735	FBgn0037073	Tsr1	97	44.994	Drosophila_melanogaster
ENSFALG00000006532	TSR1	88	79.672	ENSETEG00000017534	TSR1	90	79.672	Echinops_telfairi
ENSFALG00000006532	TSR1	96	53.905	ENSEBUG00000013731	TSR1	98	53.787	Eptatretus_burgeri
ENSFALG00000006532	TSR1	99	70.393	ENSEASG00005009302	TSR1	98	69.779	Equus_asinus_asinus
ENSFALG00000006532	TSR1	99	70.567	ENSECAG00000009114	TSR1	99	69.951	Equus_caballus
ENSFALG00000006532	TSR1	99	57.711	ENSELUG00000020984	tsr1	95	56.988	Esox_lucius
ENSFALG00000006532	TSR1	99	69.667	ENSFCAG00000006313	TSR1	99	69.051	Felis_catus
ENSFALG00000006532	TSR1	99	68.395	ENSFDAG00000006038	TSR1	99	68.025	Fukomys_damarensis
ENSFALG00000006532	TSR1	99	57.313	ENSFHEG00000003626	tsr1	99	57.194	Fundulus_heteroclitus
ENSFALG00000006532	TSR1	98	55.143	ENSGMOG00000010336	tsr1	99	55.134	Gadus_morhua
ENSFALG00000006532	TSR1	100	57.533	ENSGAFG00000012993	tsr1	100	57.788	Gambusia_affinis
ENSFALG00000006532	TSR1	99	56.970	ENSGACG00000010843	tsr1	99	57.299	Gasterosteus_aculeatus
ENSFALG00000006532	TSR1	98	79.474	ENSGAGG00000025619	-	99	78.713	Gopherus_agassizii
ENSFALG00000006532	TSR1	99	69.174	ENSGGOG00000001704	TSR1	99	68.272	Gorilla_gorilla
ENSFALG00000006532	TSR1	99	57.416	ENSHBUG00000017904	tsr1	100	59.564	Haplochromis_burtoni
ENSFALG00000006532	TSR1	97	60.406	ENSHGLG00000015688	-	99	59.518	Heterocephalus_glaber_female
ENSFALG00000006532	TSR1	99	69.259	ENSHGLG00000012806	-	99	68.765	Heterocephalus_glaber_female
ENSFALG00000006532	TSR1	99	69.259	ENSHGLG00100015392	TSR1	99	68.765	Heterocephalus_glaber_male
ENSFALG00000006532	TSR1	99	58.323	ENSHCOG00000001432	tsr1	100	58.202	Hippocampus_comes
ENSFALG00000006532	TSR1	99	58.014	ENSIPUG00000004618	tsr1	99	58.463	Ictalurus_punctatus
ENSFALG00000006532	TSR1	99	70.037	ENSSTOG00000011819	TSR1	99	70.037	Ictidomys_tridecemlineatus
ENSFALG00000006532	TSR1	91	66.353	ENSJJAG00000019505	Tsr1	95	65.680	Jaculus_jaculus
ENSFALG00000006532	TSR1	99	56.353	ENSKMAG00000005763	tsr1	99	57.587	Kryptolebias_marmoratus
ENSFALG00000006532	TSR1	99	56.147	ENSLBEG00000021823	tsr1	99	57.262	Labrus_bergylta
ENSFALG00000006532	TSR1	99	65.854	ENSLACG00000002197	TSR1	100	65.937	Latimeria_chalumnae
ENSFALG00000006532	TSR1	90	60.209	ENSLOCG00000006491	TSR1	98	60.656	Lepisosteus_oculatus
ENSFALG00000006532	TSR1	98	69.825	ENSMFAG00000021330	TSR1	99	69.068	Macaca_fascicularis
ENSFALG00000006532	TSR1	98	69.576	ENSMMUG00000017519	TSR1	99	68.820	Macaca_mulatta
ENSFALG00000006532	TSR1	98	69.701	ENSMNEG00000031382	TSR1	99	68.944	Macaca_nemestrina
ENSFALG00000006532	TSR1	98	69.576	ENSMLEG00000036733	TSR1	99	68.820	Mandrillus_leucophaeus
ENSFALG00000006532	TSR1	99	56.440	ENSMAMG00000017918	tsr1	99	57.583	Mastacembelus_armatus
ENSFALG00000006532	TSR1	99	57.914	ENSMZEG00005007477	tsr1	100	58.273	Maylandia_zebra
ENSFALG00000006532	TSR1	99	87.670	ENSMGAG00000005576	TSR1	100	87.515	Meleagris_gallopavo
ENSFALG00000006532	TSR1	99	70.074	ENSMICG00000012943	TSR1	99	69.581	Microcebus_murinus
ENSFALG00000006532	TSR1	99	68.473	ENSMOCG00000022764	Tsr1	99	68.227	Microtus_ochrogaster
ENSFALG00000006532	TSR1	99	57.908	ENSMMOG00000014280	tsr1	99	58.273	Mola_mola
ENSFALG00000006532	TSR1	99	69.865	ENSMODG00000010658	TSR1	99	70.037	Monodelphis_domestica
ENSFALG00000006532	TSR1	99	57.926	ENSMALG00000011681	tsr1	100	57.926	Monopterus_albus
ENSFALG00000006532	TSR1	99	69.259	MGP_CAROLIEiJ_G0016727	Tsr1	99	68.395	Mus_caroli
ENSFALG00000006532	TSR1	99	70.000	ENSMUSG00000038335	Tsr1	99	69.012	Mus_musculus
ENSFALG00000006532	TSR1	99	69.259	MGP_PahariEiJ_G0017864	Tsr1	99	68.642	Mus_pahari
ENSFALG00000006532	TSR1	99	70.000	MGP_SPRETEiJ_G0017570	Tsr1	99	69.012	Mus_spretus
ENSFALG00000006532	TSR1	81	72.180	ENSMPUG00000013000	TSR1	100	71.579	Mustela_putorius_furo
ENSFALG00000006532	TSR1	99	70.370	ENSMLUG00000003505	TSR1	99	69.877	Myotis_lucifugus
ENSFALG00000006532	TSR1	99	57.330	ENSNBRG00000020728	tsr1	99	57.688	Neolamprologus_brichardi
ENSFALG00000006532	TSR1	99	64.684	ENSNLEG00000017184	TSR1	98	78.492	Nomascus_leucogenys
ENSFALG00000006532	TSR1	99	65.968	ENSMEUG00000015828	TSR1	99	65.314	Notamacropus_eugenii
ENSFALG00000006532	TSR1	99	58.363	ENSONIG00000013131	tsr1	100	58.363	Oreochromis_niloticus
ENSFALG00000006532	TSR1	96	65.306	ENSOANG00000008637	TSR1	100	66.709	Ornithorhynchus_anatinus
ENSFALG00000006532	TSR1	99	69.174	ENSOCUG00000014256	TSR1	99	68.557	Oryctolagus_cuniculus
ENSFALG00000006532	TSR1	99	58.323	ENSORLG00000004926	tsr1	99	59.524	Oryzias_latipes
ENSFALG00000006532	TSR1	99	58.511	ENSORLG00020008792	tsr1	99	58.999	Oryzias_latipes_hni
ENSFALG00000006532	TSR1	99	58.442	ENSORLG00015013838	tsr1	99	59.643	Oryzias_latipes_hsok
ENSFALG00000006532	TSR1	99	58.333	ENSOMEG00000004830	tsr1	99	58.977	Oryzias_melastigma
ENSFALG00000006532	TSR1	99	68.421	ENSOGAG00000004492	TSR1	99	68.582	Otolemur_garnettii
ENSFALG00000006532	TSR1	99	70.502	ENSOARG00000015437	TSR1	98	69.890	Ovis_aries
ENSFALG00000006532	TSR1	99	68.927	ENSPPAG00000036355	TSR1	99	68.025	Pan_paniscus
ENSFALG00000006532	TSR1	99	69.790	ENSPPRG00000015519	-	99	69.174	Panthera_pardus
ENSFALG00000006532	TSR1	99	69.790	ENSPTIG00000010608	TSR1	99	69.174	Panthera_tigris_altaica
ENSFALG00000006532	TSR1	99	68.927	ENSPTRG00000008547	TSR1	99	68.025	Pan_troglodytes
ENSFALG00000006532	TSR1	98	66.958	ENSPANG00000024463	TSR1	99	66.584	Papio_anubis
ENSFALG00000006532	TSR1	99	58.333	ENSPKIG00000013972	tsr1	99	58.931	Paramormyrops_kingsleyae
ENSFALG00000006532	TSR1	87	77.324	ENSPSIG00000018258	TSR1	100	76.761	Pelodiscus_sinensis
ENSFALG00000006532	TSR1	98	59.951	ENSPMGG00000011577	tsr1	99	59.902	Periophthalmus_magnuspinnatus
ENSFALG00000006532	TSR1	99	67.901	ENSPEMG00000018033	Tsr1	99	67.778	Peromyscus_maniculatus_bairdii
ENSFALG00000006532	TSR1	99	70.160	ENSPCIG00000009357	TSR1	97	69.496	Phascolarctos_cinereus
ENSFALG00000006532	TSR1	99	58.738	ENSPFOG00000004483	TSR1	99	59.102	Poecilia_formosa
ENSFALG00000006532	TSR1	100	56.974	ENSPLAG00000022320	tsr1	100	57.801	Poecilia_latipinna
ENSFALG00000006532	TSR1	100	56.856	ENSPMEG00000004577	tsr1	100	57.801	Poecilia_mexicana
ENSFALG00000006532	TSR1	97	57.178	ENSPREG00000010354	tsr1	96	58.029	Poecilia_reticulata
ENSFALG00000006532	TSR1	99	62.225	ENSPPYG00000007792	TSR1	99	61.800	Pongo_abelii
ENSFALG00000006532	TSR1	52	75.000	ENSPCAG00000012973	-	72	75.000	Procavia_capensis
ENSFALG00000006532	TSR1	99	69.544	ENSPCOG00000017928	TSR1	99	68.927	Propithecus_coquereli
ENSFALG00000006532	TSR1	99	69.335	ENSPVAG00000002162	TSR1	99	69.089	Pteropus_vampyrus
ENSFALG00000006532	TSR1	99	57.743	ENSPNYG00000016163	tsr1	99	58.343	Pundamilia_nyererei
ENSFALG00000006532	TSR1	99	58.781	ENSPNAG00000008659	tsr1	99	58.134	Pygocentrus_nattereri
ENSFALG00000006532	TSR1	99	69.297	ENSRNOG00000002980	Tsr1	99	68.681	Rattus_norvegicus
ENSFALG00000006532	TSR1	99	69.259	ENSRBIG00000040016	TSR1	99	68.519	Rhinopithecus_bieti
ENSFALG00000006532	TSR1	99	69.259	ENSRROG00000030361	TSR1	99	68.519	Rhinopithecus_roxellana
ENSFALG00000006532	TSR1	99	68.927	ENSSBOG00000020785	TSR1	99	68.428	Saimiri_boliviensis_boliviensis
ENSFALG00000006532	TSR1	99	70.567	ENSSHAG00000011394	TSR1	99	70.567	Sarcophilus_harrisii
ENSFALG00000006532	TSR1	99	58.575	ENSSFOG00015005455	tsr1	100	57.990	Scleropages_formosus
ENSFALG00000006532	TSR1	99	55.875	ENSSMAG00000009504	tsr1	99	57.091	Scophthalmus_maximus
ENSFALG00000006532	TSR1	99	57.447	ENSSDUG00000012074	tsr1	99	57.957	Seriola_dumerili
ENSFALG00000006532	TSR1	99	56.975	ENSSLDG00000002031	tsr1	99	57.976	Seriola_lalandi_dorsalis
ENSFALG00000006532	TSR1	99	58.272	ENSSARG00000000759	TSR1	99	57.778	Sorex_araneus
ENSFALG00000006532	TSR1	99	75.799	ENSSPUG00000007042	TSR1	100	75.799	Sphenodon_punctatus
ENSFALG00000006532	TSR1	99	57.762	ENSSPAG00000021951	tsr1	99	58.534	Stegastes_partitus
ENSFALG00000006532	TSR1	99	70.037	ENSSSCG00000038534	TSR1	99	69.667	Sus_scrofa
ENSFALG00000006532	TSR1	90	96.022	ENSTGUG00000005883	TSR1	100	96.022	Taeniopygia_guttata
ENSFALG00000006532	TSR1	99	58.374	ENSTRUG00000004665	tsr1	99	58.667	Takifugu_rubripes
ENSFALG00000006532	TSR1	99	57.005	ENSTNIG00000016196	tsr1	99	56.970	Tetraodon_nigroviridis
ENSFALG00000006532	TSR1	67	88.462	ENSTBEG00000015275	-	67	88.462	Tupaia_belangeri
ENSFALG00000006532	TSR1	99	68.804	ENSTTRG00000001177	TSR1	99	68.311	Tursiops_truncatus
ENSFALG00000006532	TSR1	99	68.473	ENSUAMG00000025160	TSR1	99	68.137	Ursus_americanus
ENSFALG00000006532	TSR1	97	67.848	ENSUMAG00000009294	TSR1	98	68.077	Ursus_maritimus
ENSFALG00000006532	TSR1	83	63.422	ENSVPAG00000000228	TSR1	99	62.979	Vicugna_pacos
ENSFALG00000006532	TSR1	99	68.103	ENSVVUG00000021767	TSR1	99	67.448	Vulpes_vulpes
ENSFALG00000006532	TSR1	99	59.927	ENSXETG00000023797	tsr1	100	61.733	Xenopus_tropicalis
ENSFALG00000006532	TSR1	99	58.659	ENSXCOG00000009635	tsr1	99	58.659	Xiphophorus_couchianus
ENSFALG00000006532	TSR1	99	57.623	ENSXMAG00000001397	tsr1	96	58.384	Xiphophorus_maculatus