EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFALG00000006572 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Plus strand
Length
17569 bases
Position
chrJH603252.1:1398471-1416039
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000006855CPSF73-100_CPF11718.89.8e-5511
ENSFALP00000006855Beta-CaspPF10996.82.3e-3411
ENSFALP00000006855Lactamase_BPF00753.271.3e-1511
ENSFALP00000006855RMMBLPF07521.128e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000006884CPSF3-2012324-ENSFALP00000006855647 (aa)-U3JVQ1
Gene Model
Click here to download ENSFALG00000006572's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006572's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFALG00000006572CPSF37137.185ENSFALG00000009231INTS117837.185
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000006572CPSF310095.518ENSG00000119203CPSF3100100.000Homo_sapiens
ENSFALG00000006572CPSF310085.008ENSAPOG00000022087cpsf39982.450Acanthochromis_polyacanthus
ENSFALG00000006572CPSF37296.989ENSAPOG00000012241CPSF38896.781Acanthochromis_polyacanthus
ENSFALG00000006572CPSF310095.518ENSAMEG00000008493CPSF39595.518Ailuropoda_melanoleuca
ENSFALG00000006572CPSF39786.349ENSACIG00000023663CPSF39986.349Amphilophus_citrinellus
ENSFALG00000006572CPSF39782.222ENSACIG00000009846cpsf39982.222Amphilophus_citrinellus
ENSFALG00000006572CPSF310084.699ENSAOCG00000022056cpsf39484.699Amphiprion_ocellaris
ENSFALG00000006572CPSF39987.616ENSAOCG00000010077CPSF39984.444Amphiprion_ocellaris
ENSFALG00000006572CPSF310084.853ENSAPEG00000019526cpsf310081.633Amphiprion_percula
ENSFALG00000006572CPSF39987.616ENSAPEG00000021167CPSF39984.444Amphiprion_percula
ENSFALG00000006572CPSF39982.198ENSATEG00000014525CPSF39382.198Anabas_testudineus
ENSFALG00000006572CPSF39985.116ENSATEG00000003959cpsf39983.280Anabas_testudineus
ENSFALG00000006572CPSF310098.454ENSAPLG00000006941CPSF39598.454Anas_platyrhynchos
ENSFALG00000006572CPSF39894.016ENSACAG00000001759CPSF39994.016Anolis_carolinensis
ENSFALG00000006572CPSF310089.026ENSANAG00000031254CPSF39689.026Aotus_nancymaae
ENSFALG00000006572CPSF39786.349ENSACLG00000018846CPSF39986.349Astatotilapia_calliptera
ENSFALG00000006572CPSF310085.162ENSACLG00000014484cpsf39785.162Astatotilapia_calliptera
ENSFALG00000006572CPSF39987.616ENSAMXG00000004786cpsf39984.738Astyanax_mexicanus
ENSFALG00000006572CPSF310095.363ENSBTAG00000019735CPSF39595.363Bos_taurus
ENSFALG00000006572CPSF39657.746WBGene00013460cpsf-38957.746Caenorhabditis_elegans
ENSFALG00000006572CPSF310095.363ENSCJAG00000006276CPSF39595.363Callithrix_jacchus
ENSFALG00000006572CPSF310095.518ENSCAFG00000003375CPSF39095.518Canis_familiaris
ENSFALG00000006572CPSF39097.079ENSCAFG00020026799CPSF39497.079Canis_lupus_dingo
ENSFALG00000006572CPSF310095.363ENSCHIG00000013973CPSF39595.363Capra_hircus
ENSFALG00000006572CPSF310095.363ENSTSYG00000002967CPSF39595.363Carlito_syrichta
ENSFALG00000006572CPSF310093.972ENSCAPG00000013851CPSF39793.972Cavia_aperea
ENSFALG00000006572CPSF310093.972ENSCPOG00000011299CPSF39593.972Cavia_porcellus
ENSFALG00000006572CPSF310095.209ENSCCAG00000036730CPSF39695.209Cebus_capucinus
ENSFALG00000006572CPSF310092.747ENSCATG00000014770CPSF39398.529Cercocebus_atys
ENSFALG00000006572CPSF310093.972ENSCLAG00000002727CPSF39593.972Chinchilla_lanigera
ENSFALG00000006572CPSF310087.017ENSCSAG00000007125CPSF39487.017Chlorocebus_sabaeus
ENSFALG00000006572CPSF38868.947ENSCHOG00000000180CPSF38568.947Choloepus_hoffmanni
ENSFALG00000006572CPSF39997.523ENSCPBG00000014074CPSF39397.523Chrysemys_picta_bellii
ENSFALG00000006572CPSF39968.203ENSCING00000007214-9368.203Ciona_intestinalis
ENSFALG00000006572CPSF310082.998ENSCANG00000034435CPSF39482.998Colobus_angolensis_palliatus
ENSFALG00000006572CPSF310095.054ENSCGRG00001013134Cpsf39595.054Cricetulus_griseus_chok1gshd
ENSFALG00000006572CPSF310095.054ENSCGRG00000018319Cpsf39595.054Cricetulus_griseus_crigri
ENSFALG00000006572CPSF39986.399ENSCSEG00000002021CPSF39986.399Cynoglossus_semilaevis
ENSFALG00000006572CPSF39987.616ENSCVAG00000015067CPSF39387.616Cyprinodon_variegatus
ENSFALG00000006572CPSF39987.926ENSDARG00000027649cpsf39387.926Danio_rerio
ENSFALG00000006572CPSF310093.827ENSDNOG00000008940CPSF39093.827Dasypus_novemcinctus
ENSFALG00000006572CPSF39595.928ENSDORG00000014263Cpsf39495.928Dipodomys_ordii
ENSFALG00000006572CPSF39966.357FBgn0261065Cpsf739366.357Drosophila_melanogaster
ENSFALG00000006572CPSF39585.971ENSETEG00000003893CPSF39485.971Echinops_telfairi
ENSFALG00000006572CPSF39978.346ENSEBUG00000009018cpsf39478.496Eptatretus_burgeri
ENSFALG00000006572CPSF310095.518ENSEASG00005003970CPSF39595.518Equus_asinus_asinus
ENSFALG00000006572CPSF310095.518ENSECAG00000019911CPSF39595.518Equus_caballus
ENSFALG00000006572CPSF310079.134ENSEEUG00000015422CPSF39579.134Erinaceus_europaeus
ENSFALG00000006572CPSF39987.907ENSELUG00000013775cpsf39985.512Esox_lucius
ENSFALG00000006572CPSF310095.363ENSFCAG00000007852CPSF310095.363Felis_catus
ENSFALG00000006572CPSF39993.953ENSFDAG00000006317CPSF39493.953Fukomys_damarensis
ENSFALG00000006572CPSF310083.771ENSFHEG00000014774cpsf39483.771Fundulus_heteroclitus
ENSFALG00000006572CPSF36368.704ENSFHEG00000012186CPSF39968.704Fundulus_heteroclitus
ENSFALG00000006572CPSF310085.781ENSGMOG00000003157cpsf39485.781Gadus_morhua
ENSFALG00000006572CPSF310097.372ENSGALG00000016424CPSF39997.323Gallus_gallus
ENSFALG00000006572CPSF39987.907ENSGAFG00000008016CPSF39387.907Gambusia_affinis
ENSFALG00000006572CPSF39782.222ENSGAFG00000019449cpsf39982.222Gambusia_affinis
ENSFALG00000006572CPSF37296.146ENSGAGG00000025583CPSF39396.146Gopherus_agassizii
ENSFALG00000006572CPSF39895.276ENSGGOG00000001757CPSF310095.276Gorilla_gorilla
ENSFALG00000006572CPSF310085.162ENSHBUG00000001188cpsf39983.016Haplochromis_burtoni
ENSFALG00000006572CPSF36380.000ENSHBUG00000014332CPSF39980.000Haplochromis_burtoni
ENSFALG00000006572CPSF310093.663ENSHGLG00000000666CPSF39493.663Heterocephalus_glaber_female
ENSFALG00000006572CPSF310093.663ENSHGLG00100007765CPSF39493.663Heterocephalus_glaber_male
ENSFALG00000006572CPSF39984.520ENSHCOG00000007251cpsf39384.520Hippocampus_comes
ENSFALG00000006572CPSF39985.604ENSHCOG00000015957CPSF39285.604Hippocampus_comes
ENSFALG00000006572CPSF39986.068ENSIPUG00000023488cpsf39982.520Ictalurus_punctatus
ENSFALG00000006572CPSF310095.363ENSSTOG00000004476CPSF39595.363Ictidomys_tridecemlineatus
ENSFALG00000006572CPSF310094.590ENSJJAG00000023415Cpsf39594.590Jaculus_jaculus
ENSFALG00000006572CPSF39987.307ENSKMAG00000007317CPSF39387.307Kryptolebias_marmoratus
ENSFALG00000006572CPSF310083.771ENSKMAG00000002806cpsf39483.771Kryptolebias_marmoratus
ENSFALG00000006572CPSF35879.088ENSLBEG00000015018-9979.088Labrus_bergylta
ENSFALG00000006572CPSF39978.915ENSLBEG00000020569cpsf38978.915Labrus_bergylta
ENSFALG00000006572CPSF39588.274ENSLBEG00000013492CPSF39388.274Labrus_bergylta
ENSFALG00000006572CPSF39983.101ENSLACG00000008308CPSF39383.101Latimeria_chalumnae
ENSFALG00000006572CPSF39988.872ENSLOCG00000016823cpsf39388.872Lepisosteus_oculatus
ENSFALG00000006572CPSF310095.363ENSLAFG00000009467CPSF39595.363Loxodonta_africana
ENSFALG00000006572CPSF310095.209ENSMFAG00000001339CPSF39995.201Macaca_fascicularis
ENSFALG00000006572CPSF310095.209ENSMMUG00000018038CPSF310095.209Macaca_mulatta
ENSFALG00000006572CPSF310083.926ENSMNEG00000039447CPSF39483.926Macaca_nemestrina
ENSFALG00000006572CPSF310095.363ENSMLEG00000026825CPSF39595.363Mandrillus_leucophaeus
ENSFALG00000006572CPSF310085.317ENSMAMG00000003076cpsf39980.476Mastacembelus_armatus
ENSFALG00000006572CPSF39784.968ENSMAMG00000008835CPSF39984.968Mastacembelus_armatus
ENSFALG00000006572CPSF310085.162ENSMZEG00005014358cpsf39983.016Maylandia_zebra
ENSFALG00000006572CPSF39987.926ENSMZEG00005006258CPSF39986.349Maylandia_zebra
ENSFALG00000006572CPSF310097.372ENSMGAG00000013995CPSF39797.372Meleagris_gallopavo
ENSFALG00000006572CPSF35890.426ENSMAUG00000000166Cpsf310090.426Mesocricetus_auratus
ENSFALG00000006572CPSF310089.799ENSMICG00000002363CPSF310089.531Microcebus_murinus
ENSFALG00000006572CPSF310090.572ENSMOCG00000020067Cpsf39490.572Microtus_ochrogaster
ENSFALG00000006572CPSF39982.326ENSMMOG00000018212CPSF39882.326Mola_mola
ENSFALG00000006572CPSF37777.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSFALG00000006572CPSF310093.731ENSMODG00000014703CPSF39593.731Monodelphis_domestica
ENSFALG00000006572CPSF310085.471ENSMALG00000016416cpsf39982.698Monopterus_albus
ENSFALG00000006572CPSF39883.281ENSMALG00000011474CPSF39983.281Monopterus_albus
ENSFALG00000006572CPSF310094.590MGP_CAROLIEiJ_G0017640Cpsf39594.590Mus_caroli
ENSFALG00000006572CPSF310094.590ENSMUSG00000054309Cpsf393100.000Mus_musculus
ENSFALG00000006572CPSF310094.436MGP_PahariEiJ_G0029397Cpsf39594.436Mus_pahari
ENSFALG00000006572CPSF310094.590MGP_SPRETEiJ_G0018481Cpsf39594.590Mus_spretus
ENSFALG00000006572CPSF310095.363ENSMPUG00000013213CPSF39595.363Mustela_putorius_furo
ENSFALG00000006572CPSF310094.599ENSMLUG00000010636CPSF39594.599Myotis_lucifugus
ENSFALG00000006572CPSF310094.745ENSNGAG00000019836Cpsf39594.745Nannospalax_galili
ENSFALG00000006572CPSF310085.008ENSNBRG00000004770cpsf39982.857Neolamprologus_brichardi
ENSFALG00000006572CPSF39786.349ENSNBRG00000010525CPSF39986.349Neolamprologus_brichardi
ENSFALG00000006572CPSF310095.209ENSNLEG00000013359CPSF310095.209Nomascus_leucogenys
ENSFALG00000006572CPSF39964.861ENSMEUG00000013117-9464.861Notamacropus_eugenii
ENSFALG00000006572CPSF310085.781ENSOPRG00000008902CPSF39585.781Ochotona_princeps
ENSFALG00000006572CPSF310093.663ENSODEG00000003129CPSF39593.663Octodon_degus
ENSFALG00000006572CPSF310085.317ENSONIG00000018812cpsf39485.317Oreochromis_niloticus
ENSFALG00000006572CPSF38795.213ENSOANG00000008577CPSF310095.213Ornithorhynchus_anatinus
ENSFALG00000006572CPSF310095.209ENSOCUG00000003728CPSF39595.209Oryctolagus_cuniculus
ENSFALG00000006572CPSF310082.998ENSORLG00000018854cpsf39482.998Oryzias_latipes
ENSFALG00000006572CPSF310082.844ENSORLG00020013331cpsf39980.032Oryzias_latipes_hni
ENSFALG00000006572CPSF310082.998ENSORLG00015011017cpsf39980.190Oryzias_latipes_hsok
ENSFALG00000006572CPSF310083.153ENSOMEG00000010647cpsf39083.153Oryzias_melastigma
ENSFALG00000006572CPSF310085.008ENSOGAG00000001680CPSF39585.008Otolemur_garnettii
ENSFALG00000006572CPSF310095.363ENSOARG00000015073CPSF39595.363Ovis_aries
ENSFALG00000006572CPSF310095.363ENSPPAG00000042457CPSF39595.363Pan_paniscus
ENSFALG00000006572CPSF310095.054ENSPPRG00000016790CPSF310095.054Panthera_pardus
ENSFALG00000006572CPSF310095.054ENSPTIG00000003920CPSF310094.961Panthera_tigris_altaica
ENSFALG00000006572CPSF310095.363ENSPTRG00000011638CPSF39595.363Pan_troglodytes
ENSFALG00000006572CPSF310095.054ENSPANG00000016798CPSF39595.054Papio_anubis
ENSFALG00000006572CPSF39989.457ENSPKIG00000023646cpsf39989.457Paramormyrops_kingsleyae
ENSFALG00000006572CPSF310096.909ENSPSIG00000016144CPSF39596.909Pelodiscus_sinensis
ENSFALG00000006572CPSF38785.387ENSPMGG00000006141-9885.387Periophthalmus_magnuspinnatus
ENSFALG00000006572CPSF36378.519ENSPMGG00000015311CPSF39978.519Periophthalmus_magnuspinnatus
ENSFALG00000006572CPSF310094.900ENSPEMG00000017668Cpsf39594.900Peromyscus_maniculatus_bairdii
ENSFALG00000006572CPSF37790.619ENSPMAG00000004841cpsf39290.619Petromyzon_marinus
ENSFALG00000006572CPSF310095.054ENSPCIG00000009823CPSF39595.570Phascolarctos_cinereus
ENSFALG00000006572CPSF310084.080ENSPFOG00000015922cpsf39484.080Poecilia_formosa
ENSFALG00000006572CPSF39987.442ENSPFOG00000010418-9387.442Poecilia_formosa
ENSFALG00000006572CPSF310084.080ENSPLAG00000000882cpsf39484.080Poecilia_latipinna
ENSFALG00000006572CPSF36281.188ENSPLAG00000021300-9981.188Poecilia_latipinna
ENSFALG00000006572CPSF310084.235ENSPMEG00000018309cpsf39484.235Poecilia_mexicana
ENSFALG00000006572CPSF39982.326ENSPREG00000004482CPSF39382.326Poecilia_reticulata
ENSFALG00000006572CPSF39881.790ENSPREG00000014875cpsf310081.790Poecilia_reticulata
ENSFALG00000006572CPSF310090.572ENSPPYG00000012666CPSF39490.572Pongo_abelii
ENSFALG00000006572CPSF39563.458ENSPCAG00000015042CPSF39463.458Procavia_capensis
ENSFALG00000006572CPSF38986.538ENSPCOG00000023016CPSF39486.538Propithecus_coquereli
ENSFALG00000006572CPSF39995.504ENSPVAG00000005324CPSF39495.504Pteropus_vampyrus
ENSFALG00000006572CPSF310085.162ENSPNYG00000004405cpsf39983.016Pundamilia_nyererei
ENSFALG00000006572CPSF38490.328ENSPNYG00000021047CPSF39190.328Pundamilia_nyererei
ENSFALG00000006572CPSF39987.152ENSPNAG00000023060cpsf39985.374Pygocentrus_nattereri
ENSFALG00000006572CPSF39994.729ENSRNOG00000052418Cpsf39494.729Rattus_norvegicus
ENSFALG00000006572CPSF310090.881ENSRBIG00000041615CPSF39990.881Rhinopithecus_bieti
ENSFALG00000006572CPSF310095.363ENSRROG00000033792CPSF39595.363Rhinopithecus_roxellana
ENSFALG00000006572CPSF39640.055YLR277CYSH19340.055Saccharomyces_cerevisiae
ENSFALG00000006572CPSF310091.190ENSSBOG00000027263CPSF39491.190Saimiri_boliviensis_boliviensis
ENSFALG00000006572CPSF310095.209ENSSHAG00000007024CPSF39595.209Sarcophilus_harrisii
ENSFALG00000006572CPSF39989.457ENSSFOG00015002108cpsf39989.258Scleropages_formosus
ENSFALG00000006572CPSF39586.808ENSSMAG00000020534CPSF39086.808Scophthalmus_maximus
ENSFALG00000006572CPSF310085.162ENSSDUG00000002828cpsf39185.162Seriola_dumerili
ENSFALG00000006572CPSF39987.461ENSSDUG00000018498CPSF39985.397Seriola_dumerili
ENSFALG00000006572CPSF310085.162ENSSLDG00000008469cpsf38690.794Seriola_lalandi_dorsalis
ENSFALG00000006572CPSF39987.461ENSSLDG00000005234CPSF39985.556Seriola_lalandi_dorsalis
ENSFALG00000006572CPSF310077.280ENSSARG00000005186CPSF39577.280Sorex_araneus
ENSFALG00000006572CPSF310094.009ENSSPUG00000015525CPSF39494.009Sphenodon_punctatus
ENSFALG00000006572CPSF39987.152ENSSPAG00000002906CPSF39985.079Stegastes_partitus
ENSFALG00000006572CPSF310084.853ENSSPAG00000018579cpsf39484.853Stegastes_partitus
ENSFALG00000006572CPSF39995.666ENSSSCG00000020799CPSF39994.249Sus_scrofa
ENSFALG00000006572CPSF310099.691ENSTGUG00000013016CPSF39599.691Taeniopygia_guttata
ENSFALG00000006572CPSF36272.727ENSTRUG00000013905CPSF39972.727Takifugu_rubripes
ENSFALG00000006572CPSF39984.961ENSTRUG00000007030cpsf39284.961Takifugu_rubripes
ENSFALG00000006572CPSF38592.988ENSTBEG00000002707CPSF37992.988Tupaia_belangeri
ENSFALG00000006572CPSF38784.946ENSTTRG00000000861CPSF38284.946Tursiops_truncatus
ENSFALG00000006572CPSF39695.961ENSUAMG00000007535CPSF38995.961Ursus_americanus
ENSFALG00000006572CPSF310095.518ENSUMAG00000003676CPSF310095.518Ursus_maritimus
ENSFALG00000006572CPSF39593.322ENSVPAG00000008041CPSF39793.322Vicugna_pacos
ENSFALG00000006572CPSF310095.518ENSVVUG00000002194CPSF39595.518Vulpes_vulpes
ENSFALG00000006572CPSF39990.078ENSXETG00000008263cpsf39390.078Xenopus_tropicalis
ENSFALG00000006572CPSF310084.080ENSXCOG00000019695cpsf39484.080Xiphophorus_couchianus
ENSFALG00000006572CPSF35779.784ENSXCOG00000000957-8779.784Xiphophorus_couchianus
ENSFALG00000006572CPSF39987.752ENSXMAG00000027291CPSF39387.752Xiphophorus_maculatus
ENSFALG00000006572CPSF310084.235ENSXMAG00000009784cpsf310084.235Xiphophorus_maculatus

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