EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSFALG00000006575 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Ficedula_albicollis
Status
putative
Strand
Minus strand
Length
23265 bases
Position
chrJH603226.1:5108454-5131718
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFALP00000006871tRNA_anti-codonPF01336.252.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFALT00000006900RPA1-2013168-ENSFALP00000006871615 (aa)-U3JVR7
Gene Model
Click here to download ENSFALG00000006575's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006575's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFALG00000006575RPA19961.084ENSAPOG00000011658rpa19961.928Acanthochromis_polyacanthus
ENSFALG00000006575RPA19758.351ENSAPOG00000019409RPA18658.351Acanthochromis_polyacanthus
ENSFALG00000006575RPA19972.890ENSAMEG00000007706RPA19972.890Ailuropoda_melanoleuca
ENSFALG00000006575RPA19557.288ENSACIG00000007277rpa19957.288Amphilophus_citrinellus
ENSFALG00000006575RPA19556.639ENSACIG00000012881RPA110056.639Amphilophus_citrinellus
ENSFALG00000006575RPA19952.744ENSAOCG00000009003RPA19953.374Amphiprion_ocellaris
ENSFALG00000006575RPA19962.848ENSAOCG00000023376rpa19962.976Amphiprion_ocellaris
ENSFALG00000006575RPA19952.083ENSAPEG00000019132RPA19952.474Amphiprion_percula
ENSFALG00000006575RPA19962.684ENSAPEG00000008634rpa19962.803Amphiprion_percula
ENSFALG00000006575RPA19954.740ENSATEG00000006443RPA19954.740Anabas_testudineus
ENSFALG00000006575RPA19462.995ENSATEG00000022024rpa19962.995Anabas_testudineus
ENSFALG00000006575RPA19875.519ENSAPLG00000012442RPA110075.668Anas_platyrhynchos
ENSFALG00000006575RPA19966.290ENSACAG00000014490RPA19966.452Anolis_carolinensis
ENSFALG00000006575RPA19873.762ENSANAG00000023456RPA110073.762Aotus_nancymaae
ENSFALG00000006575RPA19363.763ENSACLG00000006640rpa19963.763Astatotilapia_calliptera
ENSFALG00000006575RPA19956.211ENSACLG00000005223RPA110056.211Astatotilapia_calliptera
ENSFALG00000006575RPA19961.951ENSAMXG00000008418rpa19962.602Astyanax_mexicanus
ENSFALG00000006575RPA19974.637ENSBTAG00000009711RPA110074.637Bos_taurus
ENSFALG00000006575RPA19973.667ENSCJAG00000001848RPA110073.829Callithrix_jacchus
ENSFALG00000006575RPA19974.637ENSCAFG00000019249RPA110074.637Canis_familiaris
ENSFALG00000006575RPA19974.637ENSCAFG00020009847RPA110074.637Canis_lupus_dingo
ENSFALG00000006575RPA19974.637ENSCHIG00000026308RPA110074.798Capra_hircus
ENSFALG00000006575RPA19975.161ENSTSYG00000003482-10075.161Carlito_syrichta
ENSFALG00000006575RPA19973.829ENSCPOG00000000035RPA110073.829Cavia_porcellus
ENSFALG00000006575RPA19961.897ENSCCAG00000010981RPA110061.736Cebus_capucinus
ENSFALG00000006575RPA19970.598ENSCLAG00000015045-10070.598Chinchilla_lanigera
ENSFALG00000006575RPA19974.716ENSCLAG00000005185-9974.716Chinchilla_lanigera
ENSFALG00000006575RPA19962.219ENSCSAG00000013833RPA110063.023Chlorocebus_sabaeus
ENSFALG00000006575RPA17278.685ENSCHOG00000009454-10078.685Choloepus_hoffmanni
ENSFALG00000006575RPA19571.574ENSCHOG00000013540-10071.574Choloepus_hoffmanni
ENSFALG00000006575RPA110085.622ENSCPBG00000020377RPA110085.739Chrysemys_picta_bellii
ENSFALG00000006575RPA19941.708ENSCING00000023482-9841.708Ciona_intestinalis
ENSFALG00000006575RPA19872.185ENSCANG00000030911RPA110072.185Colobus_angolensis_palliatus
ENSFALG00000006575RPA19974.396ENSCGRG00001008197Rpa19974.396Cricetulus_griseus_chok1gshd
ENSFALG00000006575RPA18174.510ENSCGRG00000000582Rpa19974.510Cricetulus_griseus_crigri
ENSFALG00000006575RPA19952.208ENSCSEG00000012726RPA19853.162Cynoglossus_semilaevis
ENSFALG00000006575RPA19959.578ENSCSEG00000013066rpa19959.578Cynoglossus_semilaevis
ENSFALG00000006575RPA19963.295ENSCVAG00000019431rpa19964.274Cyprinodon_variegatus
ENSFALG00000006575RPA19451.482ENSCVAG00000013446-9551.482Cyprinodon_variegatus
ENSFALG00000006575RPA19962.704ENSDARG00000003938rpa19962.704Danio_rerio
ENSFALG00000006575RPA19875.041ENSDNOG00000017218RPA19875.041Dasypus_novemcinctus
ENSFALG00000006575RPA19974.960ENSDORG00000006199Rpa110074.960Dipodomys_ordii
ENSFALG00000006575RPA19941.005FBgn0010173RpA-709941.167Drosophila_melanogaster
ENSFALG00000006575RPA18276.842ENSETEG00000017608RPA18276.842Echinops_telfairi
ENSFALG00000006575RPA19874.877ENSEASG00005009372RPA110073.710Equus_asinus_asinus
ENSFALG00000006575RPA19975.767ENSECAG00000023886RPA110075.767Equus_caballus
ENSFALG00000006575RPA16978.436ENSEEUG00000002186-6878.436Erinaceus_europaeus
ENSFALG00000006575RPA19961.812ENSELUG00000021071rpa19961.812Esox_lucius
ENSFALG00000006575RPA18856.642ENSELUG00000006136RPA19956.642Esox_lucius
ENSFALG00000006575RPA19974.194ENSFCAG00000006306RPA19974.194Felis_catus
ENSFALG00000006575RPA19975.444ENSFDAG00000007720RPA110075.444Fukomys_damarensis
ENSFALG00000006575RPA19962.541ENSFHEG00000003580rpa19962.541Fundulus_heteroclitus
ENSFALG00000006575RPA19959.344ENSGMOG00000010382rpa19959.344Gadus_morhua
ENSFALG00000006575RPA110091.234ENSGALG00000003072RPA110091.234Gallus_gallus
ENSFALG00000006575RPA19952.648ENSGAFG00000020953RPA110052.648Gambusia_affinis
ENSFALG00000006575RPA19862.829ENSGAFG00000012916rpa19962.829Gambusia_affinis
ENSFALG00000006575RPA19961.338ENSGACG00000010856rpa19961.338Gasterosteus_aculeatus
ENSFALG00000006575RPA110085.299ENSGAGG00000013611RPA110085.299Gopherus_agassizii
ENSFALG00000006575RPA19972.195ENSGGOG00000014186RPA110072.195Gorilla_gorilla
ENSFALG00000006575RPA19652.181ENSHBUG00000009348RPA19952.181Haplochromis_burtoni
ENSFALG00000006575RPA19963.235ENSHBUG00000017773rpa19963.235Haplochromis_burtoni
ENSFALG00000006575RPA19974.554ENSHGLG00000008846RPA110074.716Heterocephalus_glaber_female
ENSFALG00000006575RPA19969.952ENSHGLG00100000799-10069.952Heterocephalus_glaber_male
ENSFALG00000006575RPA19962.843ENSHGLG00100002005-10063.005Heterocephalus_glaber_male
ENSFALG00000006575RPA19974.554ENSHGLG00100017755-10074.716Heterocephalus_glaber_male
ENSFALG00000006575RPA19943.528ENSHCOG00000000351RPA19942.926Hippocampus_comes
ENSFALG00000006575RPA19958.987ENSHCOG00000001401rpa19959.641Hippocampus_comes
ENSFALG00000006575RPA19962.258ENSIPUG00000004400rpa19962.258Ictalurus_punctatus
ENSFALG00000006575RPA19868.740ENSSTOG00000022475RPA19868.740Ictidomys_tridecemlineatus
ENSFALG00000006575RPA19574.281ENSJJAG00000000876Rpa19874.281Jaculus_jaculus
ENSFALG00000006575RPA19960.163ENSKMAG00000005605rpa19960.976Kryptolebias_marmoratus
ENSFALG00000006575RPA19953.796ENSKMAG00000000234RPA110053.796Kryptolebias_marmoratus
ENSFALG00000006575RPA19963.333ENSLBEG00000002281RPA19263.333Labrus_bergylta
ENSFALG00000006575RPA19963.011ENSLBEG00000021604rpa19963.011Labrus_bergylta
ENSFALG00000006575RPA18165.737ENSLACG00000007210RPA19965.737Latimeria_chalumnae
ENSFALG00000006575RPA19965.033ENSLOCG00000006397rpa19965.033Lepisosteus_oculatus
ENSFALG00000006575RPA19972.873ENSLAFG00000015354RPA19972.873Loxodonta_africana
ENSFALG00000006575RPA18273.031ENSMFAG00000036138-9974.016Macaca_fascicularis
ENSFALG00000006575RPA19967.690ENSMMUG00000002442-10067.690Macaca_mulatta
ENSFALG00000006575RPA19873.684ENSMMUG00000011604-10074.507Macaca_mulatta
ENSFALG00000006575RPA19971.845ENSMNEG00000031632-10072.654Macaca_nemestrina
ENSFALG00000006575RPA18871.186ENSMNEG00000029837-9971.186Macaca_nemestrina
ENSFALG00000006575RPA19869.016ENSMLEG00000038768-10069.836Mandrillus_leucophaeus
ENSFALG00000006575RPA19961.311ENSMAMG00000017993rpa19961.311Mastacembelus_armatus
ENSFALG00000006575RPA19951.852ENSMAMG00000020097RPA19951.852Mastacembelus_armatus
ENSFALG00000006575RPA19963.725ENSMZEG00005007551rpa19963.725Maylandia_zebra
ENSFALG00000006575RPA19956.211ENSMZEG00005024731RPA110056.211Maylandia_zebra
ENSFALG00000006575RPA19991.028ENSMGAG00000005315RPA19991.028Meleagris_gallopavo
ENSFALG00000006575RPA19773.964ENSMAUG00000010474Rpa19974.129Mesocricetus_auratus
ENSFALG00000006575RPA19974.313ENSMICG00000012867RPA110074.313Microcebus_murinus
ENSFALG00000006575RPA19974.188ENSMOCG00000013019Rpa19974.188Microtus_ochrogaster
ENSFALG00000006575RPA19960.884ENSMMOG00000014292rpa19961.993Mola_mola
ENSFALG00000006575RPA19854.918ENSMMOG00000010868RPA19854.918Mola_mola
ENSFALG00000006575RPA19977.634ENSMODG00000010549RPA19977.634Monodelphis_domestica
ENSFALG00000006575RPA19560.976ENSMALG00000001208RPA18360.976Monopterus_albus
ENSFALG00000006575RPA19962.007ENSMALG00000011453rpa19962.171Monopterus_albus
ENSFALG00000006575RPA19973.667MGP_CAROLIEiJ_G0016734Rpa19973.667Mus_caroli
ENSFALG00000006575RPA19971.840ENSMUSG00000000751Rpa19971.840Mus_musculus
ENSFALG00000006575RPA19973.473MGP_PahariEiJ_G0017871Rpa19973.473Mus_pahari
ENSFALG00000006575RPA19971.725MGP_SPRETEiJ_G0017577Rpa19971.725Mus_spretus
ENSFALG00000006575RPA19974.960ENSMPUG00000013119RPA110074.960Mustela_putorius_furo
ENSFALG00000006575RPA19972.756ENSMLUG00000006113RPA110072.756Myotis_lucifugus
ENSFALG00000006575RPA19574.662ENSNGAG00000004522Rpa19474.662Nannospalax_galili
ENSFALG00000006575RPA19854.530ENSNBRG00000009672RPA19754.530Neolamprologus_brichardi
ENSFALG00000006575RPA19463.731ENSNBRG00000020595rpa19963.731Neolamprologus_brichardi
ENSFALG00000006575RPA19973.990ENSNLEG00000017149RPA110074.313Nomascus_leucogenys
ENSFALG00000006575RPA19866.281ENSMEUG00000006714RPA19966.281Notamacropus_eugenii
ENSFALG00000006575RPA19574.500ENSODEG00000009038RPA19674.500Octodon_degus
ENSFALG00000006575RPA19964.228ENSONIG00000013135rpa19964.228Oreochromis_niloticus
ENSFALG00000006575RPA19877.521ENSOANG00000010880RPA19977.521Ornithorhynchus_anatinus
ENSFALG00000006575RPA19972.573ENSOCUG00000001504RPA110072.573Oryctolagus_cuniculus
ENSFALG00000006575RPA19961.211ENSORLG00000004856rpa19961.211Oryzias_latipes
ENSFALG00000006575RPA19952.584ENSORLG00000003368RPA19952.584Oryzias_latipes
ENSFALG00000006575RPA19951.194ENSORLG00020015284RPA19951.194Oryzias_latipes_hni
ENSFALG00000006575RPA19961.211ENSORLG00020008980rpa19961.211Oryzias_latipes_hni
ENSFALG00000006575RPA19952.550ENSORLG00015020383RPA19952.550Oryzias_latipes_hsok
ENSFALG00000006575RPA19961.211ENSORLG00015013982rpa19961.211Oryzias_latipes_hsok
ENSFALG00000006575RPA16761.743ENSORLG00015005867-9461.743Oryzias_latipes_hsok
ENSFALG00000006575RPA19959.411ENSOMEG00000004704rpa19959.411Oryzias_melastigma
ENSFALG00000006575RPA19853.612ENSOMEG00000011040RPA19956.432Oryzias_melastigma
ENSFALG00000006575RPA19973.990ENSOGAG00000005581-10073.990Otolemur_garnettii
ENSFALG00000006575RPA19470.280ENSOGAG00000029379-10078.836Otolemur_garnettii
ENSFALG00000006575RPA19974.637ENSOARG00000014479RPA110074.798Ovis_aries
ENSFALG00000006575RPA19973.990ENSPPAG00000039680RPA110074.313Pan_paniscus
ENSFALG00000006575RPA19974.194ENSPPRG00000011807RPA19974.194Panthera_pardus
ENSFALG00000006575RPA19974.194ENSPTIG00000007898RPA19974.194Panthera_tigris_altaica
ENSFALG00000006575RPA19973.990ENSPTRG00000008539RPA110074.313Pan_troglodytes
ENSFALG00000006575RPA19973.990ENSPANG00000024592RPA110074.798Papio_anubis
ENSFALG00000006575RPA19461.750ENSPKIG00000008053rpa19461.921Paramormyrops_kingsleyae
ENSFALG00000006575RPA19883.663ENSPSIG00000015617RPA110083.663Pelodiscus_sinensis
ENSFALG00000006575RPA19952.167ENSPMGG00000000543RPA19953.940Periophthalmus_magnuspinnatus
ENSFALG00000006575RPA19960.591ENSPMGG00000011589rpa19960.755Periophthalmus_magnuspinnatus
ENSFALG00000006575RPA19974.513ENSPEMG00000021061Rpa19974.513Peromyscus_maniculatus_bairdii
ENSFALG00000006575RPA19975.000ENSPCIG00000019049RPA19975.323Phascolarctos_cinereus
ENSFALG00000006575RPA19863.591ENSPFOG00000003987rpa19963.591Poecilia_formosa
ENSFALG00000006575RPA19863.054ENSPLAG00000004984rpa19963.054Poecilia_latipinna
ENSFALG00000006575RPA19453.376ENSPLAG00000008844-9753.376Poecilia_latipinna
ENSFALG00000006575RPA19863.591ENSPMEG00000020602rpa19963.591Poecilia_mexicana
ENSFALG00000006575RPA19452.875ENSPMEG00000003627-9752.875Poecilia_mexicana
ENSFALG00000006575RPA19951.105ENSPREG00000010119RPA110051.105Poecilia_reticulata
ENSFALG00000006575RPA19455.959ENSPREG00000010174rpa19655.959Poecilia_reticulata
ENSFALG00000006575RPA19974.152ENSPCOG00000001799RPA110074.152Propithecus_coquereli
ENSFALG00000006575RPA19973.344ENSPVAG00000002149RPA110073.344Pteropus_vampyrus
ENSFALG00000006575RPA19955.901ENSPNYG00000024165RPA110055.901Pundamilia_nyererei
ENSFALG00000006575RPA19963.562ENSPNYG00000016316rpa19963.715Pundamilia_nyererei
ENSFALG00000006575RPA19855.446ENSPNAG00000008599rpa19953.920Pygocentrus_nattereri
ENSFALG00000006575RPA19777.512ENSRNOG00000003123Rpa19974.838Rattus_norvegicus
ENSFALG00000006575RPA19974.960ENSRBIG00000036587RPA110074.960Rhinopithecus_bieti
ENSFALG00000006575RPA19970.113ENSRROG00000043278RPA110070.113Rhinopithecus_roxellana
ENSFALG00000006575RPA19834.231YAR007CRFA19934.231Saccharomyces_cerevisiae
ENSFALG00000006575RPA19870.888ENSSBOG00000030233RPA110071.053Saimiri_boliviensis_boliviensis
ENSFALG00000006575RPA19976.346ENSSHAG00000007969RPA19876.346Sarcophilus_harrisii
ENSFALG00000006575RPA19963.502ENSSFOG00015005362rpa19263.502Scleropages_formosus
ENSFALG00000006575RPA19952.410ENSSMAG00000019746RPA19952.560Scophthalmus_maximus
ENSFALG00000006575RPA19951.679ENSSDUG00000016358RPA19952.123Seriola_dumerili
ENSFALG00000006575RPA19962.520ENSSDUG00000011949rpa19962.520Seriola_dumerili
ENSFALG00000006575RPA19951.020ENSSLDG00000020784RPA19951.749Seriola_lalandi_dorsalis
ENSFALG00000006575RPA19962.193ENSSLDG00000011806rpa19962.193Seriola_lalandi_dorsalis
ENSFALG00000006575RPA18785.294ENSSARG00000007506RPA18985.294Sorex_araneus
ENSFALG00000006575RPA19878.182ENSSPUG00000007223RPA110078.182Sphenodon_punctatus
ENSFALG00000006575RPA19956.066ENSSPAG00000011165RPA19956.066Stegastes_partitus
ENSFALG00000006575RPA19962.582ENSSPAG00000009903rpa19962.582Stegastes_partitus
ENSFALG00000006575RPA19874.257ENSSSCG00000017822RPA110074.422Sus_scrofa
ENSFALG00000006575RPA110097.236ENSTGUG00000005775RPA110097.236Taeniopygia_guttata
ENSFALG00000006575RPA19963.011ENSTRUG00000003616rpa19963.011Takifugu_rubripes
ENSFALG00000006575RPA19962.558ENSTRUG00000000405RPA19158.678Takifugu_rubripes
ENSFALG00000006575RPA19963.799ENSTNIG00000016199rpa19963.474Tetraodon_nigroviridis
ENSFALG00000006575RPA17978.781ENSTBEG00000002709RPA18178.781Tupaia_belangeri
ENSFALG00000006575RPA19975.365ENSTTRG00000001169RPA19975.527Tursiops_truncatus
ENSFALG00000006575RPA19678.723ENSUAMG00000015676RPA19784.314Ursus_americanus
ENSFALG00000006575RPA19974.152ENSUMAG00000009328RPA110074.313Ursus_maritimus
ENSFALG00000006575RPA19973.463ENSVPAG00000009443RPA110073.463Vicugna_pacos
ENSFALG00000006575RPA19974.152ENSVVUG00000021715RPA110074.152Vulpes_vulpes
ENSFALG00000006575RPA19969.870ENSXETG00000013538rpa19971.498Xenopus_tropicalis
ENSFALG00000006575RPA19361.391ENSXCOG00000010068rpa19462.298Xiphophorus_couchianus
ENSFALG00000006575RPA19554.966ENSXCOG00000009899-9954.966Xiphophorus_couchianus
ENSFALG00000006575RPA19863.054ENSXMAG00000004102rpa19963.860Xiphophorus_maculatus
ENSFALG00000006575RPA19859.091ENSXMAG00000010333RPA19059.091Xiphophorus_maculatus

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