EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000006581 (Gene tree)
Gene ID: -
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 22970 bases
Position: chrJH603262.1:1678251-1701220
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000006862	YTH	PF04146.15	3.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000006891	YTHDC1-201	2778	-	ENSFALP00000006862	500 (aa)	-	U3JVQ8

Gene Model

Click here to download ENSFALG00000006581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000006581	YTHDC1	87	93.917	ENSG00000083896	YTHDC1	82	100.000	Homo_sapiens
ENSFALG00000006581	YTHDC1	81	66.282	ENSAPOG00000013997	ythdc1	74	63.333	Acanthochromis_polyacanthus
ENSFALG00000006581	YTHDC1	87	97.449	ENSAMEG00000005688	YTHDC1	68	89.679	Ailuropoda_melanoleuca
ENSFALG00000006581	YTHDC1	83	64.756	ENSACIG00000019728	ythdc1	78	63.333	Amphilophus_citrinellus
ENSFALG00000006581	YTHDC1	81	68.207	ENSAOCG00000000239	ythdc1	75	63.596	Amphiprion_ocellaris
ENSFALG00000006581	YTHDC1	70	75.254	ENSAPEG00000000618	ythdc1	69	64.781	Amphiprion_percula
ENSFALG00000006581	YTHDC1	75	75.085	ENSATEG00000023007	ythdc1	83	62.679	Anabas_testudineus
ENSFALG00000006581	YTHDC1	85	99.745	ENSAPLG00000009921	YTHDC1	65	97.761	Anas_platyrhynchos
ENSFALG00000006581	YTHDC1	87	95.153	ENSACAG00000009697	YTHDC1	65	93.284	Anolis_carolinensis
ENSFALG00000006581	YTHDC1	87	93.917	ENSANAG00000001522	YTHDC1	68	89.679	Aotus_nancymaae
ENSFALG00000006581	YTHDC1	83	66.576	ENSACLG00000019371	ythdc1	76	62.882	Astatotilapia_calliptera
ENSFALG00000006581	YTHDC1	81	87.395	ENSAMXG00000006978	ythdc1	72	75.561	Astyanax_mexicanus
ENSFALG00000006581	YTHDC1	87	96.684	ENSBTAG00000015572	YTHDC1	68	88.991	Bos_taurus
ENSFALG00000006581	YTHDC1	87	93.917	ENSCJAG00000009934	YTHDC1	68	89.679	Callithrix_jacchus
ENSFALG00000006581	YTHDC1	87	97.449	ENSCAFG00000002821	YTHDC1	68	89.679	Canis_familiaris
ENSFALG00000006581	YTHDC1	87	97.449	ENSCAFG00020027112	YTHDC1	68	89.679	Canis_lupus_dingo
ENSFALG00000006581	YTHDC1	85	83.250	ENSCHIG00000004810	YTHDC1	58	93.536	Capra_hircus
ENSFALG00000006581	YTHDC1	87	93.917	ENSTSYG00000011668	YTHDC1	68	89.679	Carlito_syrichta
ENSFALG00000006581	YTHDC1	79	56.522	ENSCAPG00000008722	YTHDC1	60	56.522	Cavia_aperea
ENSFALG00000006581	YTHDC1	87	82.238	ENSCPOG00000010929	YTHDC1	66	78.670	Cavia_porcellus
ENSFALG00000006581	YTHDC1	87	93.917	ENSCCAG00000035754	YTHDC1	68	89.679	Cebus_capucinus
ENSFALG00000006581	YTHDC1	87	92.124	ENSCATG00000036320	YTHDC1	68	88.063	Cercocebus_atys
ENSFALG00000006581	YTHDC1	85	91.408	ENSCLAG00000005482	YTHDC1	68	87.387	Chinchilla_lanigera
ENSFALG00000006581	YTHDC1	87	93.917	ENSCSAG00000005252	YTHDC1	68	89.679	Chlorocebus_sabaeus
ENSFALG00000006581	YTHDC1	59	90.260	ENSCHOG00000006136	-	68	90.260	Choloepus_hoffmanni
ENSFALG00000006581	YTHDC1	86	98.469	ENSCPBG00000021965	YTHDC1	64	96.517	Chrysemys_picta_bellii
ENSFALG00000006581	YTHDC1	87	93.917	ENSCANG00000004769	YTHDC1	68	89.679	Colobus_angolensis_palliatus
ENSFALG00000006581	YTHDC1	87	91.885	ENSCGRG00001000816	Ythdc1	69	87.838	Cricetulus_griseus_chok1gshd
ENSFALG00000006581	YTHDC1	85	93.674	ENSCGRG00000009807	Ythdc1	68	89.450	Cricetulus_griseus_crigri
ENSFALG00000006581	YTHDC1	84	64.646	ENSCSEG00000020404	ythdc1	74	63.656	Cynoglossus_semilaevis
ENSFALG00000006581	YTHDC1	81	65.591	ENSCVAG00000022349	ythdc1	74	62.084	Cyprinodon_variegatus
ENSFALG00000006581	YTHDC1	83	85.434	ENSDARG00000051953	ythdc1	72	74.607	Danio_rerio
ENSFALG00000006581	YTHDC1	87	96.939	ENSDNOG00000004949	YTHDC1	69	89.220	Dasypus_novemcinctus
ENSFALG00000006581	YTHDC1	85	93.917	ENSDORG00000013045	Ythdc1	68	89.679	Dipodomys_ordii
ENSFALG00000006581	YTHDC1	73	97.183	ENSETEG00000001878	YTHDC1	50	97.468	Echinops_telfairi
ENSFALG00000006581	YTHDC1	87	97.449	ENSEASG00005018383	YTHDC1	68	89.679	Equus_asinus_asinus
ENSFALG00000006581	YTHDC1	87	97.449	ENSECAG00000018303	YTHDC1	68	89.679	Equus_caballus
ENSFALG00000006581	YTHDC1	87	95.918	ENSEEUG00000015466	YTHDC1	69	87.927	Erinaceus_europaeus
ENSFALG00000006581	YTHDC1	81	80.435	ENSELUG00000014029	ythdc1	70	73.966	Esox_lucius
ENSFALG00000006581	YTHDC1	87	97.449	ENSFCAG00000026791	YTHDC1	69	89.679	Felis_catus
ENSFALG00000006581	YTHDC1	85	93.431	ENSFDAG00000018560	YTHDC1	68	89.220	Fukomys_damarensis
ENSFALG00000006581	YTHDC1	79	58.000	ENSFHEG00000001286	ythdc1	59	58.000	Fundulus_heteroclitus
ENSFALG00000006581	YTHDC1	74	78.325	ENSGMOG00000018815	ythdc1	68	78.325	Gadus_morhua
ENSFALG00000006581	YTHDC1	97	93.392	ENSGALG00000035906	YTHDC1	65	94.737	Gallus_gallus
ENSFALG00000006581	YTHDC1	51	78.155	ENSGAFG00000001759	ythdc1	70	64.029	Gambusia_affinis
ENSFALG00000006581	YTHDC1	87	63.882	ENSGACG00000015486	ythdc1	76	60.938	Gasterosteus_aculeatus
ENSFALG00000006581	YTHDC1	87	96.250	ENSGAGG00000007108	YTHDC1	66	94.390	Gopherus_agassizii
ENSFALG00000006581	YTHDC1	87	92.124	ENSGGOG00000021958	YTHDC1	68	88.063	Gorilla_gorilla
ENSFALG00000006581	YTHDC1	83	66.576	ENSHBUG00000019288	ythdc1	76	62.882	Haplochromis_burtoni
ENSFALG00000006581	YTHDC1	87	91.647	ENSHGLG00000006319	-	69	87.613	Heterocephalus_glaber_female
ENSFALG00000006581	YTHDC1	89	81.818	ENSHGLG00000003239	-	64	73.723	Heterocephalus_glaber_female
ENSFALG00000006581	YTHDC1	87	91.807	ENSHGLG00100001556	-	69	87.727	Heterocephalus_glaber_male
ENSFALG00000006581	YTHDC1	89	81.818	ENSHGLG00100008060	-	64	71.256	Heterocephalus_glaber_male
ENSFALG00000006581	YTHDC1	87	53.427	ENSHCOG00000001520	ythdc1	93	54.049	Hippocampus_comes
ENSFALG00000006581	YTHDC1	87	81.280	ENSIPUG00000018136	ythdc1	71	78.202	Ictalurus_punctatus
ENSFALG00000006581	YTHDC1	87	92.124	ENSSTOG00000013652	YTHDC1	68	88.063	Ictidomys_tridecemlineatus
ENSFALG00000006581	YTHDC1	85	91.885	ENSJJAG00000010268	Ythdc1	64	93.415	Jaculus_jaculus
ENSFALG00000006581	YTHDC1	69	66.216	ENSKMAG00000006483	ythdc1	88	65.197	Kryptolebias_marmoratus
ENSFALG00000006581	YTHDC1	86	74.419	ENSLBEG00000020831	ythdc1	75	74.419	Labrus_bergylta
ENSFALG00000006581	YTHDC1	78	91.071	ENSLACG00000004893	YTHDC1	62	84.368	Latimeria_chalumnae
ENSFALG00000006581	YTHDC1	87	90.281	ENSLOCG00000003045	ythdc1	67	90.281	Lepisosteus_oculatus
ENSFALG00000006581	YTHDC1	87	95.250	ENSLAFG00000021592	YTHDC1	74	89.714	Loxodonta_africana
ENSFALG00000006581	YTHDC1	87	92.124	ENSMFAG00000031927	YTHDC1	68	88.063	Macaca_fascicularis
ENSFALG00000006581	YTHDC1	87	93.917	ENSMMUG00000002265	YTHDC1	68	89.679	Macaca_mulatta
ENSFALG00000006581	YTHDC1	87	93.917	ENSMNEG00000033751	YTHDC1	68	89.679	Macaca_nemestrina
ENSFALG00000006581	YTHDC1	87	93.917	ENSMLEG00000042147	YTHDC1	68	89.679	Mandrillus_leucophaeus
ENSFALG00000006581	YTHDC1	81	67.209	ENSMAMG00000013122	ythdc1	73	63.043	Mastacembelus_armatus
ENSFALG00000006581	YTHDC1	83	66.576	ENSMZEG00005023173	ythdc1	76	62.882	Maylandia_zebra
ENSFALG00000006581	YTHDC1	87	99.235	ENSMGAG00000010391	YTHDC1	64	97.264	Meleagris_gallopavo
ENSFALG00000006581	YTHDC1	87	91.885	ENSMAUG00000001286	Ythdc1	69	87.838	Mesocricetus_auratus
ENSFALG00000006581	YTHDC1	97	89.113	ENSMICG00000034640	YTHDC1	76	89.113	Microcebus_murinus
ENSFALG00000006581	YTHDC1	97	88.508	ENSMOCG00000020201	Ythdc1	76	88.508	Microtus_ochrogaster
ENSFALG00000006581	YTHDC1	82	63.333	ENSMMOG00000021200	ythdc1	72	63.333	Mola_mola
ENSFALG00000006581	YTHDC1	68	60.882	ENSMODG00000004117	-	92	62.821	Monodelphis_domestica
ENSFALG00000006581	YTHDC1	87	97.704	ENSMODG00000020754	-	73	87.196	Monodelphis_domestica
ENSFALG00000006581	YTHDC1	89	58.202	ENSMODG00000009173	-	83	62.308	Monodelphis_domestica
ENSFALG00000006581	YTHDC1	92	56.024	ENSMODG00000010076	-	82	57.021	Monodelphis_domestica
ENSFALG00000006581	YTHDC1	93	68.605	ENSMODG00000014337	-	72	70.153	Monodelphis_domestica
ENSFALG00000006581	YTHDC1	71	76.000	ENSMALG00000013412	ythdc1	70	66.216	Monopterus_albus
ENSFALG00000006581	YTHDC1	87	93.431	MGP_CAROLIEiJ_G0027347	Ythdc1	62	96.939	Mus_caroli
ENSFALG00000006581	YTHDC1	87	93.431	ENSMUSG00000035851	Ythdc1	62	96.939	Mus_musculus
ENSFALG00000006581	YTHDC1	87	95.025	MGP_PahariEiJ_G0017126	Ythdc1	62	96.939	Mus_pahari
ENSFALG00000006581	YTHDC1	87	95.025	MGP_SPRETEiJ_G0028339	Ythdc1	63	96.939	Mus_spretus
ENSFALG00000006581	YTHDC1	96	97.183	ENSMPUG00000001743	YTHDC1	79	97.183	Mustela_putorius_furo
ENSFALG00000006581	YTHDC1	85	97.194	ENSMLUG00000016300	YTHDC1	68	89.450	Myotis_lucifugus
ENSFALG00000006581	YTHDC1	69	66.852	ENSNBRG00000007663	ythdc1	78	62.838	Neolamprologus_brichardi
ENSFALG00000006581	YTHDC1	85	90.931	ENSNLEG00000009202	YTHDC1	68	86.937	Nomascus_leucogenys
ENSFALG00000006581	YTHDC1	81	96.581	ENSOPRG00000008986	YTHDC1	56	96.581	Ochotona_princeps
ENSFALG00000006581	YTHDC1	87	92.944	ENSODEG00000001715	YTHDC1	69	88.761	Octodon_degus
ENSFALG00000006581	YTHDC1	86	74.419	ENSONIG00000012651	ythdc1	76	63.319	Oreochromis_niloticus
ENSFALG00000006581	YTHDC1	88	94.855	ENSOANG00000014398	YTHDC1	62	94.855	Ornithorhynchus_anatinus
ENSFALG00000006581	YTHDC1	88	96.923	ENSOCUG00000015886	YTHDC1	64	96.899	Oryctolagus_cuniculus
ENSFALG00000006581	YTHDC1	81	67.935	ENSORLG00000030544	ythdc1	76	66.667	Oryzias_latipes
ENSFALG00000006581	YTHDC1	81	67.120	ENSORLG00020019316	ythdc1	76	66.667	Oryzias_latipes_hni
ENSFALG00000006581	YTHDC1	87	62.103	ENSOMEG00000000551	ythdc1	70	66.098	Oryzias_melastigma
ENSFALG00000006581	YTHDC1	87	94.404	ENSOGAG00000003362	YTHDC1	68	90.138	Otolemur_garnettii
ENSFALG00000006581	YTHDC1	87	96.684	ENSOARG00000008633	YTHDC1	68	88.991	Ovis_aries
ENSFALG00000006581	YTHDC1	87	92.124	ENSPPAG00000041315	YTHDC1	69	88.063	Pan_paniscus
ENSFALG00000006581	YTHDC1	87	95.500	ENSPPRG00000011979	YTHDC1	68	88.063	Panthera_pardus
ENSFALG00000006581	YTHDC1	85	95.000	ENSPTIG00000015527	YTHDC1	68	87.613	Panthera_tigris_altaica
ENSFALG00000006581	YTHDC1	87	92.124	ENSPTRG00000016105	YTHDC1	69	88.063	Pan_troglodytes
ENSFALG00000006581	YTHDC1	86	93.659	ENSPANG00000021590	YTHDC1	68	88.063	Papio_anubis
ENSFALG00000006581	YTHDC1	87	81.710	ENSPKIG00000018497	ythdc1	67	81.818	Paramormyrops_kingsleyae
ENSFALG00000006581	YTHDC1	85	98.214	ENSPSIG00000002782	YTHDC1	65	96.269	Pelodiscus_sinensis
ENSFALG00000006581	YTHDC1	74	51.781	ENSPMGG00000000970	-	82	56.992	Periophthalmus_magnuspinnatus
ENSFALG00000006581	YTHDC1	85	93.674	ENSPEMG00000013850	Ythdc1	68	89.450	Peromyscus_maniculatus_bairdii
ENSFALG00000006581	YTHDC1	87	97.704	ENSPCIG00000006870	YTHDC1	73	87.196	Phascolarctos_cinereus
ENSFALG00000006581	YTHDC1	81	65.591	ENSPFOG00000013404	ythdc1	75	63.333	Poecilia_formosa
ENSFALG00000006581	YTHDC1	69	65.591	ENSPLAG00000011079	ythdc1	91	63.908	Poecilia_latipinna
ENSFALG00000006581	YTHDC1	81	65.591	ENSPMEG00000009238	ythdc1	75	65.000	Poecilia_mexicana
ENSFALG00000006581	YTHDC1	84	63.510	ENSPREG00000016973	ythdc1	77	63.333	Poecilia_reticulata
ENSFALG00000006581	YTHDC1	82	93.917	ENSPPYG00000014726	YTHDC1	62	97.449	Pongo_abelii
ENSFALG00000006581	YTHDC1	87	86.585	ENSPCOG00000019105	YTHDC1	67	81.532	Propithecus_coquereli
ENSFALG00000006581	YTHDC1	87	93.878	ENSPVAG00000015551	YTHDC1	68	86.468	Pteropus_vampyrus
ENSFALG00000006581	YTHDC1	83	66.576	ENSPNYG00000011687	ythdc1	76	62.882	Pundamilia_nyererei
ENSFALG00000006581	YTHDC1	87	82.697	ENSPNAG00000028365	ythdc1	70	81.179	Pygocentrus_nattereri
ENSFALG00000006581	YTHDC1	87	91.647	ENSRNOG00000001996	Ythdc1	62	95.000	Rattus_norvegicus
ENSFALG00000006581	YTHDC1	85	91.408	ENSRBIG00000028279	YTHDC1	68	87.387	Rhinopithecus_bieti
ENSFALG00000006581	YTHDC1	87	93.917	ENSRROG00000035028	YTHDC1	68	89.679	Rhinopithecus_roxellana
ENSFALG00000006581	YTHDC1	87	92.124	ENSSBOG00000022353	YTHDC1	68	88.063	Saimiri_boliviensis_boliviensis
ENSFALG00000006581	YTHDC1	87	97.704	ENSSHAG00000002538	YTHDC1	72	87.417	Sarcophilus_harrisii
ENSFALG00000006581	YTHDC1	87	82.353	ENSSFOG00015003298	ythdc1	66	82.353	Scleropages_formosus
ENSFALG00000006581	YTHDC1	84	65.473	ENSSMAG00000009086	ythdc1	75	63.333	Scophthalmus_maximus
ENSFALG00000006581	YTHDC1	81	67.663	ENSSDUG00000022008	ythdc1	75	66.667	Seriola_dumerili
ENSFALG00000006581	YTHDC1	81	67.663	ENSSLDG00000007926	ythdc1	74	66.667	Seriola_lalandi_dorsalis
ENSFALG00000006581	YTHDC1	78	96.939	ENSSARG00000010960	YTHDC1	76	89.220	Sorex_araneus
ENSFALG00000006581	YTHDC1	87	96.954	ENSSPUG00000009357	YTHDC1	64	95.288	Sphenodon_punctatus
ENSFALG00000006581	YTHDC1	81	68.478	ENSSPAG00000011449	ythdc1	72	65.446	Stegastes_partitus
ENSFALG00000006581	YTHDC1	87	95.000	ENSSSCG00000035505	YTHDC1	68	87.613	Sus_scrofa
ENSFALG00000006581	YTHDC1	87	100.000	ENSTGUG00000004452	-	66	98.010	Taeniopygia_guttata
ENSFALG00000006581	YTHDC1	75	67.442	ENSTRUG00000010142	ythdc1	76	79.412	Takifugu_rubripes
ENSFALG00000006581	YTHDC1	85	68.733	ENSTNIG00000013243	ythdc1	71	66.998	Tetraodon_nigroviridis
ENSFALG00000006581	YTHDC1	87	96.632	ENSTBEG00000011546	YTHDC1	63	96.632	Tupaia_belangeri
ENSFALG00000006581	YTHDC1	87	96.429	ENSTTRG00000005083	YTHDC1	68	88.761	Tursiops_truncatus
ENSFALG00000006581	YTHDC1	78	97.449	ENSUAMG00000010388	YTHDC1	64	89.679	Ursus_americanus
ENSFALG00000006581	YTHDC1	96	86.739	ENSUMAG00000013668	YTHDC1	75	86.739	Ursus_maritimus
ENSFALG00000006581	YTHDC1	87	92.602	ENSVPAG00000009040	YTHDC1	67	86.480	Vicugna_pacos
ENSFALG00000006581	YTHDC1	85	95.500	ENSVVUG00000005387	YTHDC1	67	88.063	Vulpes_vulpes
ENSFALG00000006581	YTHDC1	86	90.816	ENSXETG00000017960	ythdc1	72	85.253	Xenopus_tropicalis
ENSFALG00000006581	YTHDC1	81	65.323	ENSXMAG00000005196	ythdc1	76	62.031	Xiphophorus_maculatus