EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000006628 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 18427 bases
Position: chrJH603226.1:5205761-5224187
Accession: 101805888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000006913	RRM_4	PF10598.9	1.8e-48	1	1
ENSFALP00000006913	U5_2-snRNA_bdg	PF10597.9	3.5e-74	1	1
ENSFALP00000006913	PRO8NT	PF08082.11	3.5e-87	1	1
ENSFALP00000006913	U6-snRNA_bdg	PF10596.9	8.6e-90	1	1
ENSFALP00000006913	PROCN	PF08083.11	4.4e-237	1	1
ENSFALP00000006913	PRP8_domainIV	PF12134.8	2e-130	1	1
ENSFALP00000006913	PROCT	PF08084.11	3.8e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000006942	PRPF8-201	7182	XM_005056809	ENSFALP00000006913	2335 (aa)	XP_005056866	U3JVV9

Gene Model

Click here to download ENSFALG00000006628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006628's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000006628	PRPF8	100	99.486	ENSG00000174231	PRPF8	100	99.486	Homo_sapiens
ENSFALG00000006628	PRPF8	100	97.861	ENSAPOG00000010079	prpf8	100	97.861	Acanthochromis_polyacanthus
ENSFALG00000006628	PRPF8	100	99.486	ENSAMEG00000007940	PRPF8	100	99.486	Ailuropoda_melanoleuca
ENSFALG00000006628	PRPF8	100	95.966	ENSACIG00000018280	prpf8	100	95.966	Amphilophus_citrinellus
ENSFALG00000006628	PRPF8	100	97.861	ENSAOCG00000010725	prpf8	100	97.861	Amphiprion_ocellaris
ENSFALG00000006628	PRPF8	100	97.861	ENSAPEG00000014397	prpf8	100	97.861	Amphiprion_percula
ENSFALG00000006628	PRPF8	100	97.263	ENSATEG00000010062	prpf8	100	97.263	Anabas_testudineus
ENSFALG00000006628	PRPF8	96	99.867	ENSAPLG00000010357	PRPF8	100	99.867	Anas_platyrhynchos
ENSFALG00000006628	PRPF8	82	97.728	ENSACAG00000014784	PRPF8	99	97.728	Anolis_carolinensis
ENSFALG00000006628	PRPF8	100	99.486	ENSANAG00000032629	PRPF8	100	99.486	Aotus_nancymaae
ENSFALG00000006628	PRPF8	100	97.362	ENSACLG00000020858	prpf8	100	97.362	Astatotilapia_calliptera
ENSFALG00000006628	PRPF8	100	97.901	ENSAMXG00000020291	prpf8	100	97.901	Astyanax_mexicanus
ENSFALG00000006628	PRPF8	100	99.486	ENSBTAG00000011488	PRPF8	100	99.486	Bos_taurus
ENSFALG00000006628	PRPF8	99	86.535	WBGene00004187	prp-8	99	86.621	Caenorhabditis_elegans
ENSFALG00000006628	PRPF8	100	99.486	ENSCJAG00000001911	PRPF8	100	99.486	Callithrix_jacchus
ENSFALG00000006628	PRPF8	100	99.486	ENSCAFG00000019221	PRPF8	100	99.486	Canis_familiaris
ENSFALG00000006628	PRPF8	96	99.688	ENSCAFG00020009943	PRPF8	100	99.688	Canis_lupus_dingo
ENSFALG00000006628	PRPF8	100	99.486	ENSCHIG00000017499	PRPF8	100	99.486	Capra_hircus
ENSFALG00000006628	PRPF8	100	99.486	ENSTSYG00000014120	PRPF8	100	99.486	Carlito_syrichta
ENSFALG00000006628	PRPF8	96	97.461	ENSCAPG00000009459	PRPF8	99	97.461	Cavia_aperea
ENSFALG00000006628	PRPF8	100	99.486	ENSCPOG00000010379	PRPF8	100	99.486	Cavia_porcellus
ENSFALG00000006628	PRPF8	100	99.486	ENSCCAG00000031983	-	100	99.486	Cebus_capucinus
ENSFALG00000006628	PRPF8	100	99.486	ENSCATG00000038595	PRPF8	100	99.486	Cercocebus_atys
ENSFALG00000006628	PRPF8	100	99.486	ENSCLAG00000004388	PRPF8	100	99.486	Chinchilla_lanigera
ENSFALG00000006628	PRPF8	100	99.486	ENSCSAG00000013929	PRPF8	100	99.486	Chlorocebus_sabaeus
ENSFALG00000006628	PRPF8	81	98.000	ENSCHOG00000008590	PRPF8	88	98.000	Choloepus_hoffmanni
ENSFALG00000006628	PRPF8	100	99.829	ENSCPBG00000020409	PRPF8	100	99.829	Chrysemys_picta_bellii
ENSFALG00000006628	PRPF8	99	92.993	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSFALG00000006628	PRPF8	100	99.486	ENSCANG00000043088	PRPF8	100	99.486	Colobus_angolensis_palliatus
ENSFALG00000006628	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSFALG00000006628	PRPF8	100	97.777	ENSCSEG00000007905	prpf8	100	97.777	Cynoglossus_semilaevis
ENSFALG00000006628	PRPF8	100	97.652	ENSDARG00000026180	prpf8	100	97.652	Danio_rerio
ENSFALG00000006628	PRPF8	93	99.494	ENSDNOG00000018471	PRPF8	99	99.494	Dasypus_novemcinctus
ENSFALG00000006628	PRPF8	84	98.722	ENSDORG00000006185	Prpf8	96	98.722	Dipodomys_ordii
ENSFALG00000006628	PRPF8	99	91.545	FBgn0033688	Prp8	97	91.545	Drosophila_melanogaster
ENSFALG00000006628	PRPF8	100	94.047	ENSETEG00000017592	PRPF8	100	94.047	Echinops_telfairi
ENSFALG00000006628	PRPF8	99	93.763	ENSEBUG00000006548	prpf8	99	93.763	Eptatretus_burgeri
ENSFALG00000006628	PRPF8	100	99.486	ENSEASG00005009514	PRPF8	100	99.486	Equus_asinus_asinus
ENSFALG00000006628	PRPF8	97	99.692	ENSECAG00000021318	PRPF8	100	99.692	Equus_caballus
ENSFALG00000006628	PRPF8	67	99.259	ENSEEUG00000012120	-	67	99.259	Erinaceus_europaeus
ENSFALG00000006628	PRPF8	98	96.591	ENSELUG00000007120	prpf8	99	96.591	Esox_lucius
ENSFALG00000006628	PRPF8	100	99.486	ENSFCAG00000006297	PRPF8	100	99.486	Felis_catus
ENSFALG00000006628	PRPF8	100	99.486	ENSFDAG00000004711	PRPF8	100	99.486	Fukomys_damarensis
ENSFALG00000006628	PRPF8	100	97.566	ENSFHEG00000021084	prpf8	100	97.566	Fundulus_heteroclitus
ENSFALG00000006628	PRPF8	100	95.516	ENSGMOG00000002028	prpf8	99	95.516	Gadus_morhua
ENSFALG00000006628	PRPF8	100	99.914	ENSGALG00000002943	PRPF8	100	99.914	Gallus_gallus
ENSFALG00000006628	PRPF8	99	97.851	ENSGAFG00000010337	prpf8	99	97.851	Gambusia_affinis
ENSFALG00000006628	PRPF8	100	97.730	ENSGACG00000008504	prpf8	100	97.730	Gasterosteus_aculeatus
ENSFALG00000006628	PRPF8	100	99.743	ENSGAGG00000008350	PRPF8	100	99.743	Gopherus_agassizii
ENSFALG00000006628	PRPF8	100	99.486	ENSGGOG00000005516	PRPF8	100	99.486	Gorilla_gorilla
ENSFALG00000006628	PRPF8	100	97.773	ENSHBUG00000016192	prpf8	100	97.773	Haplochromis_burtoni
ENSFALG00000006628	PRPF8	100	99.486	ENSHGLG00000012029	PRPF8	100	99.486	Heterocephalus_glaber_female
ENSFALG00000006628	PRPF8	100	99.486	ENSHGLG00100016494	PRPF8	100	99.486	Heterocephalus_glaber_male
ENSFALG00000006628	PRPF8	100	97.649	ENSHCOG00000016414	prpf8	100	97.649	Hippocampus_comes
ENSFALG00000006628	PRPF8	100	97.733	ENSIPUG00000023230	prpf8	100	97.733	Ictalurus_punctatus
ENSFALG00000006628	PRPF8	100	99.486	ENSSTOG00000005128	PRPF8	100	99.486	Ictidomys_tridecemlineatus
ENSFALG00000006628	PRPF8	100	97.302	ENSJJAG00000021159	Prpf8	100	97.302	Jaculus_jaculus
ENSFALG00000006628	PRPF8	99	97.979	ENSKMAG00000016118	prpf8	99	97.979	Kryptolebias_marmoratus
ENSFALG00000006628	PRPF8	100	97.605	ENSLBEG00000026903	prpf8	100	97.605	Labrus_bergylta
ENSFALG00000006628	PRPF8	95	96.117	ENSLACG00000010479	PRPF8	99	98.599	Latimeria_chalumnae
ENSFALG00000006628	PRPF8	99	97.988	ENSLOCG00000005409	prpf8	99	97.988	Lepisosteus_oculatus
ENSFALG00000006628	PRPF8	100	99.486	ENSLAFG00000015445	PRPF8	100	99.486	Loxodonta_africana
ENSFALG00000006628	PRPF8	100	99.486	ENSMFAG00000039995	PRPF8	100	99.486	Macaca_fascicularis
ENSFALG00000006628	PRPF8	100	99.486	ENSMMUG00000004820	PRPF8	100	99.486	Macaca_mulatta
ENSFALG00000006628	PRPF8	100	99.486	ENSMNEG00000035713	PRPF8	100	99.486	Macaca_nemestrina
ENSFALG00000006628	PRPF8	100	99.486	ENSMLEG00000037937	PRPF8	100	99.486	Mandrillus_leucophaeus
ENSFALG00000006628	PRPF8	100	97.861	ENSMAMG00000008919	prpf8	100	97.861	Mastacembelus_armatus
ENSFALG00000006628	PRPF8	100	97.362	ENSMZEG00005015073	prpf8	100	97.362	Maylandia_zebra
ENSFALG00000006628	PRPF8	100	99.914	ENSMGAG00000004769	PRPF8	100	99.914	Meleagris_gallopavo
ENSFALG00000006628	PRPF8	100	99.443	ENSMICG00000010320	PRPF8	100	99.443	Microcebus_murinus
ENSFALG00000006628	PRPF8	100	99.443	ENSMOCG00000016838	Prpf8	100	99.443	Microtus_ochrogaster
ENSFALG00000006628	PRPF8	100	97.348	ENSMMOG00000011887	prpf8	100	97.348	Mola_mola
ENSFALG00000006628	PRPF8	100	99.486	ENSMODG00000010480	PRPF8	100	99.486	Monodelphis_domestica
ENSFALG00000006628	PRPF8	97	97.621	ENSMALG00000003558	prpf8	100	97.621	Monopterus_albus
ENSFALG00000006628	PRPF8	100	99.400	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.400	Mus_caroli
ENSFALG00000006628	PRPF8	100	99.400	ENSMUSG00000020850	Prpf8	100	99.400	Mus_musculus
ENSFALG00000006628	PRPF8	100	99.358	MGP_PahariEiJ_G0017877	Prpf8	100	99.358	Mus_pahari
ENSFALG00000006628	PRPF8	100	99.400	MGP_SPRETEiJ_G0017583	Prpf8	100	99.400	Mus_spretus
ENSFALG00000006628	PRPF8	100	99.486	ENSMPUG00000013227	PRPF8	100	99.486	Mustela_putorius_furo
ENSFALG00000006628	PRPF8	100	99.273	ENSMLUG00000002666	PRPF8	100	99.273	Myotis_lucifugus
ENSFALG00000006628	PRPF8	100	97.687	ENSNGAG00000005305	Prpf8	100	97.687	Nannospalax_galili
ENSFALG00000006628	PRPF8	100	97.404	ENSNBRG00000013127	prpf8	100	97.404	Neolamprologus_brichardi
ENSFALG00000006628	PRPF8	97	97.508	ENSNLEG00000000897	PRPF8	98	97.508	Nomascus_leucogenys
ENSFALG00000006628	PRPF8	99	97.870	ENSMEUG00000015999	PRPF8	100	97.870	Notamacropus_eugenii
ENSFALG00000006628	PRPF8	100	97.944	ENSOPRG00000003102	PRPF8	100	97.944	Ochotona_princeps
ENSFALG00000006628	PRPF8	100	99.486	ENSODEG00000008468	PRPF8	100	99.486	Octodon_degus
ENSFALG00000006628	PRPF8	100	97.447	ENSONIG00000008153	prpf8	100	97.447	Oreochromis_niloticus
ENSFALG00000006628	PRPF8	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSFALG00000006628	PRPF8	100	99.486	ENSOCUG00000000081	PRPF8	100	99.486	Oryctolagus_cuniculus
ENSFALG00000006628	PRPF8	100	97.026	ENSORLG00000008036	prpf8	100	97.026	Oryzias_latipes
ENSFALG00000006628	PRPF8	100	96.985	ENSORLG00020021070	prpf8	100	96.985	Oryzias_latipes_hni
ENSFALG00000006628	PRPF8	100	97.026	ENSORLG00015002340	prpf8	100	97.026	Oryzias_latipes_hsok
ENSFALG00000006628	PRPF8	100	95.582	ENSOMEG00000016866	prpf8	100	95.582	Oryzias_melastigma
ENSFALG00000006628	PRPF8	100	99.358	ENSOARG00000013312	PRPF8	100	99.358	Ovis_aries
ENSFALG00000006628	PRPF8	100	99.486	ENSPPAG00000042753	PRPF8	100	99.486	Pan_paniscus
ENSFALG00000006628	PRPF8	100	99.486	ENSPPRG00000008746	PRPF8	100	99.486	Panthera_pardus
ENSFALG00000006628	PRPF8	100	99.400	ENSPTIG00000019200	PRPF8	100	99.400	Panthera_tigris_altaica
ENSFALG00000006628	PRPF8	100	99.486	ENSPTRG00000039576	PRPF8	100	99.486	Pan_troglodytes
ENSFALG00000006628	PRPF8	99	99.696	ENSPANG00000024607	PRPF8	98	99.696	Papio_anubis
ENSFALG00000006628	PRPF8	100	97.657	ENSPKIG00000011201	prpf8	100	97.657	Paramormyrops_kingsleyae
ENSFALG00000006628	PRPF8	100	99.786	ENSPSIG00000013393	PRPF8	100	99.786	Pelodiscus_sinensis
ENSFALG00000006628	PRPF8	100	99.443	ENSPEMG00000021699	Prpf8	100	99.443	Peromyscus_maniculatus_bairdii
ENSFALG00000006628	PRPF8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSFALG00000006628	PRPF8	100	99.486	ENSPCIG00000022603	PRPF8	100	99.688	Phascolarctos_cinereus
ENSFALG00000006628	PRPF8	100	97.031	ENSPFOG00000007005	prpf8	100	97.031	Poecilia_formosa
ENSFALG00000006628	PRPF8	100	96.488	ENSPLAG00000020777	prpf8	100	96.488	Poecilia_latipinna
ENSFALG00000006628	PRPF8	100	97.031	ENSPMEG00000004051	prpf8	100	97.031	Poecilia_mexicana
ENSFALG00000006628	PRPF8	100	97.901	ENSPREG00000021902	prpf8	100	97.901	Poecilia_reticulata
ENSFALG00000006628	PRPF8	100	99.486	ENSPPYG00000007777	PRPF8	100	99.486	Pongo_abelii
ENSFALG00000006628	PRPF8	90	99.010	ENSPCAG00000008938	PRPF8	90	99.010	Procavia_capensis
ENSFALG00000006628	PRPF8	100	99.443	ENSPCOG00000015182	PRPF8	100	99.443	Propithecus_coquereli
ENSFALG00000006628	PRPF8	93	99.446	ENSPVAG00000002134	PRPF8	93	99.446	Pteropus_vampyrus
ENSFALG00000006628	PRPF8	100	97.773	ENSPNYG00000016356	prpf8	100	97.773	Pundamilia_nyererei
ENSFALG00000006628	PRPF8	100	97.819	ENSPNAG00000009247	prpf8	100	97.819	Pygocentrus_nattereri
ENSFALG00000006628	PRPF8	100	99.400	ENSRNOG00000003495	Prpf8	100	99.400	Rattus_norvegicus
ENSFALG00000006628	PRPF8	100	99.486	ENSRBIG00000031219	PRPF8	100	99.486	Rhinopithecus_bieti
ENSFALG00000006628	PRPF8	100	99.486	ENSRROG00000038014	PRPF8	100	99.486	Rhinopithecus_roxellana
ENSFALG00000006628	PRPF8	99	62.559	YHR165C	PRP8	95	62.602	Saccharomyces_cerevisiae
ENSFALG00000006628	PRPF8	100	99.486	ENSSBOG00000029717	PRPF8	100	99.486	Saimiri_boliviensis_boliviensis
ENSFALG00000006628	PRPF8	100	99.443	ENSSHAG00000006167	PRPF8	100	99.443	Sarcophilus_harrisii
ENSFALG00000006628	PRPF8	100	97.609	ENSSFOG00015013905	prpf8	100	97.609	Scleropages_formosus
ENSFALG00000006628	PRPF8	100	97.648	ENSSMAG00000017736	prpf8	100	97.648	Scophthalmus_maximus
ENSFALG00000006628	PRPF8	100	97.861	ENSSDUG00000003029	prpf8	100	97.861	Seriola_dumerili
ENSFALG00000006628	PRPF8	68	98.874	ENSSLDG00000017096	prpf8	100	98.874	Seriola_lalandi_dorsalis
ENSFALG00000006628	PRPF8	87	98.033	ENSSARG00000002892	PRPF8	87	98.033	Sorex_araneus
ENSFALG00000006628	PRPF8	100	99.486	ENSSPUG00000007463	PRPF8	100	99.486	Sphenodon_punctatus
ENSFALG00000006628	PRPF8	100	97.263	ENSSPAG00000015639	prpf8	100	97.263	Stegastes_partitus
ENSFALG00000006628	PRPF8	100	99.486	ENSSSCG00000017817	PRPF8	100	99.486	Sus_scrofa
ENSFALG00000006628	PRPF8	52	99.825	ENSTGUG00000015597	-	95	99.825	Taeniopygia_guttata
ENSFALG00000006628	PRPF8	100	100.000	ENSTGUG00000005648	-	100	100.000	Taeniopygia_guttata
ENSFALG00000006628	PRPF8	100	97.648	ENSTRUG00000015906	prpf8	100	97.648	Takifugu_rubripes
ENSFALG00000006628	PRPF8	95	98.865	ENSTNIG00000003460	prpf8	99	98.865	Tetraodon_nigroviridis
ENSFALG00000006628	PRPF8	93	99.796	ENSTBEG00000006431	PRPF8	93	99.796	Tupaia_belangeri
ENSFALG00000006628	PRPF8	100	98.887	ENSTTRG00000006869	PRPF8	100	98.887	Tursiops_truncatus
ENSFALG00000006628	PRPF8	54	98.579	ENSUAMG00000015644	-	96	98.579	Ursus_americanus
ENSFALG00000006628	PRPF8	100	99.229	ENSUMAG00000009385	PRPF8	100	99.229	Ursus_maritimus
ENSFALG00000006628	PRPF8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSFALG00000006628	PRPF8	100	99.486	ENSVVUG00000021695	PRPF8	99	99.486	Vulpes_vulpes
ENSFALG00000006628	PRPF8	100	98.673	ENSXETG00000022259	prpf8	100	98.673	Xenopus_tropicalis
ENSFALG00000006628	PRPF8	100	97.523	ENSXCOG00000012775	prpf8	100	97.523	Xiphophorus_couchianus
ENSFALG00000006628	PRPF8	100	97.566	ENSXMAG00000008505	prpf8	100	97.566	Xiphophorus_maculatus