EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000006904 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 12042 bases
Position: chrJH603175.1:5073102-5085143
Accession: 101808128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007206	MA3	PF02847.17	1.7e-23	1	1
ENSFALP00000007206	MIF4G	PF02854.19	4.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007238	NOM1-201	2966	XM_005040782	ENSFALP00000007206	695 (aa)	XP_005040839	U3JWQ2

Gene Model

Click here to download ENSFALG00000006904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000006904	NOM1	97	64.483	ENSG00000146909	NOM1	80	64.416	Homo_sapiens
ENSFALG00000006904	NOM1	77	67.286	ENSAPOG00000012073	nom1	82	58.215	Acanthochromis_polyacanthus
ENSFALG00000006904	NOM1	97	60.000	ENSAMEG00000001412	NOM1	96	60.628	Ailuropoda_melanoleuca
ENSFALG00000006904	NOM1	99	59.249	ENSACIG00000018050	nom1	79	59.172	Amphilophus_citrinellus
ENSFALG00000006904	NOM1	77	66.791	ENSAOCG00000006229	nom1	82	57.429	Amphiprion_ocellaris
ENSFALG00000006904	NOM1	77	66.791	ENSAPEG00000015994	nom1	82	58.166	Amphiprion_percula
ENSFALG00000006904	NOM1	79	66.007	ENSATEG00000005405	nom1	81	59.361	Anabas_testudineus
ENSFALG00000006904	NOM1	95	76.652	ENSAPLG00000006585	NOM1	100	74.816	Anas_platyrhynchos
ENSFALG00000006904	NOM1	100	64.430	ENSACAG00000011192	NOM1	86	65.757	Anolis_carolinensis
ENSFALG00000006904	NOM1	99	58.488	ENSACLG00000000033	nom1	81	59.329	Astatotilapia_calliptera
ENSFALG00000006904	NOM1	76	65.152	ENSAMXG00000041486	nom1	83	56.906	Astyanax_mexicanus
ENSFALG00000006904	NOM1	97	61.281	ENSBTAG00000016435	NOM1	81	61.660	Bos_taurus
ENSFALG00000006904	NOM1	97	64.035	ENSCJAG00000004336	NOM1	80	63.558	Callithrix_jacchus
ENSFALG00000006904	NOM1	97	60.375	ENSCAFG00020005121	NOM1	80	61.072	Canis_lupus_dingo
ENSFALG00000006904	NOM1	97	60.350	ENSCHIG00000020102	NOM1	82	60.714	Capra_hircus
ENSFALG00000006904	NOM1	98	64.370	ENSTSYG00000000227	NOM1	80	62.606	Carlito_syrichta
ENSFALG00000006904	NOM1	75	71.815	ENSCAPG00000016273	NOM1	99	71.815	Cavia_aperea
ENSFALG00000006904	NOM1	97	60.383	ENSCPOG00000025538	NOM1	79	59.084	Cavia_porcellus
ENSFALG00000006904	NOM1	70	73.031	ENSCCAG00000014944	NOM1	99	73.219	Cebus_capucinus
ENSFALG00000006904	NOM1	97	62.319	ENSCLAG00000000267	NOM1	80	62.734	Chinchilla_lanigera
ENSFALG00000006904	NOM1	85	79.696	ENSCPBG00000018215	NOM1	75	69.330	Chrysemys_picta_bellii
ENSFALG00000006904	NOM1	75	40.338	ENSCING00000005248	-	88	36.496	Ciona_intestinalis
ENSFALG00000006904	NOM1	81	68.056	ENSCANG00000041984	NOM1	89	72.447	Colobus_angolensis_palliatus
ENSFALG00000006904	NOM1	97	62.920	ENSCGRG00001020293	Nom1	81	62.341	Cricetulus_griseus_chok1gshd
ENSFALG00000006904	NOM1	75	71.869	ENSCGRG00000005405	Nom1	97	71.869	Cricetulus_griseus_crigri
ENSFALG00000006904	NOM1	92	58.204	ENSCSEG00000000932	nom1	76	57.740	Cynoglossus_semilaevis
ENSFALG00000006904	NOM1	99	59.490	ENSCVAG00000007562	nom1	81	58.806	Cyprinodon_variegatus
ENSFALG00000006904	NOM1	99	57.752	ENSDARG00000060027	nom1	100	66.119	Danio_rerio
ENSFALG00000006904	NOM1	99	54.572	ENSDORG00000015682	Nom1	99	53.846	Dipodomys_ordii
ENSFALG00000006904	NOM1	75	41.651	FBgn0035336	CG9004	62	41.463	Drosophila_melanogaster
ENSFALG00000006904	NOM1	68	64.706	ENSETEG00000003104	NOM1	79	49.787	Echinops_telfairi
ENSFALG00000006904	NOM1	62	51.142	ENSEBUG00000010077	nom1	96	51.142	Eptatretus_burgeri
ENSFALG00000006904	NOM1	97	63.864	ENSEASG00005001489	NOM1	80	63.181	Equus_asinus_asinus
ENSFALG00000006904	NOM1	76	70.998	ENSECAG00000007596	NOM1	56	72.062	Equus_caballus
ENSFALG00000006904	NOM1	53	30.508	ENSELUG00000010536	cwc22	54	30.508	Esox_lucius
ENSFALG00000006904	NOM1	78	66.727	ENSELUG00000006266	nom1	82	59.040	Esox_lucius
ENSFALG00000006904	NOM1	97	60.029	ENSFCAG00000006467	NOM1	84	61.190	Felis_catus
ENSFALG00000006904	NOM1	99	61.314	ENSFDAG00000016241	NOM1	82	60.888	Fukomys_damarensis
ENSFALG00000006904	NOM1	79	65.771	ENSFHEG00000015974	nom1	81	58.358	Fundulus_heteroclitus
ENSFALG00000006904	NOM1	99	54.369	ENSGMOG00000005129	nom1	91	55.634	Gadus_morhua
ENSFALG00000006904	NOM1	100	80.719	ENSGALG00000006437	NOM1	78	79.458	Gallus_gallus
ENSFALG00000006904	NOM1	79	65.474	ENSGAFG00000003211	nom1	80	58.884	Gambusia_affinis
ENSFALG00000006904	NOM1	99	68.980	ENSGAGG00000014347	NOM1	84	69.091	Gopherus_agassizii
ENSFALG00000006904	NOM1	78	70.980	ENSGGOG00000010920	NOM1	74	62.958	Gorilla_gorilla
ENSFALG00000006904	NOM1	99	58.512	ENSHBUG00000014616	nom1	81	59.270	Haplochromis_burtoni
ENSFALG00000006904	NOM1	99	62.661	ENSHGLG00000007392	NOM1	80	62.678	Heterocephalus_glaber_female
ENSFALG00000006904	NOM1	99	62.661	ENSHGLG00100014407	NOM1	78	72.026	Heterocephalus_glaber_male
ENSFALG00000006904	NOM1	78	62.662	ENSIPUG00000013980	nom1	83	56.700	Ictalurus_punctatus
ENSFALG00000006904	NOM1	84	67.009	ENSSTOG00000031736	NOM1	91	72.062	Ictidomys_tridecemlineatus
ENSFALG00000006904	NOM1	70	72.934	ENSJJAG00000011716	Nom1	98	72.934	Jaculus_jaculus
ENSFALG00000006904	NOM1	78	65.448	ENSLBEG00000009252	nom1	82	57.865	Labrus_bergylta
ENSFALG00000006904	NOM1	99	62.321	ENSLACG00000011777	NOM1	84	61.723	Latimeria_chalumnae
ENSFALG00000006904	NOM1	99	61.836	ENSLOCG00000012452	nom1	83	60.940	Lepisosteus_oculatus
ENSFALG00000006904	NOM1	97	58.728	ENSLAFG00000007119	NOM1	82	58.730	Loxodonta_africana
ENSFALG00000006904	NOM1	77	66.850	ENSMMUG00000039033	NOM1	80	59.720	Macaca_mulatta
ENSFALG00000006904	NOM1	75	73.218	ENSMLEG00000037062	NOM1	98	73.218	Mandrillus_leucophaeus
ENSFALG00000006904	NOM1	99	54.521	ENSMAMG00000004118	nom1	62	65.399	Mastacembelus_armatus
ENSFALG00000006904	NOM1	99	58.345	ENSMZEG00005000384	nom1	81	59.184	Maylandia_zebra
ENSFALG00000006904	NOM1	99	78.530	ENSMGAG00000005051	NOM1	99	78.530	Meleagris_gallopavo
ENSFALG00000006904	NOM1	97	62.392	ENSMAUG00000017988	Nom1	82	62.270	Mesocricetus_auratus
ENSFALG00000006904	NOM1	98	62.445	ENSMICG00000017531	NOM1	82	63.000	Microcebus_murinus
ENSFALG00000006904	NOM1	78	69.541	ENSMOCG00000015962	Nom1	80	62.251	Microtus_ochrogaster
ENSFALG00000006904	NOM1	76	61.439	ENSMMOG00000004419	nom1	82	54.167	Mola_mola
ENSFALG00000006904	NOM1	98	67.246	ENSMODG00000005177	NOM1	82	66.994	Monodelphis_domestica
ENSFALG00000006904	NOM1	93	57.143	ENSMALG00000008800	nom1	79	56.786	Monopterus_albus
ENSFALG00000006904	NOM1	99	62.714	MGP_CAROLIEiJ_G0027043	Nom1	80	61.857	Mus_caroli
ENSFALG00000006904	NOM1	99	62.857	ENSMUSG00000001569	Nom1	80	61.571	Mus_musculus
ENSFALG00000006904	NOM1	99	62.607	MGP_SPRETEiJ_G0028039	Nom1	79	61.748	Mus_spretus
ENSFALG00000006904	NOM1	97	58.892	ENSMPUG00000009745	NOM1	99	59.712	Mustela_putorius_furo
ENSFALG00000006904	NOM1	87	67.164	ENSMLUG00000009129	NOM1	97	68.836	Myotis_lucifugus
ENSFALG00000006904	NOM1	99	58.523	ENSNBRG00000016429	nom1	94	68.441	Neolamprologus_brichardi
ENSFALG00000006904	NOM1	97	61.022	ENSNLEG00000000238	NOM1	80	61.142	Nomascus_leucogenys
ENSFALG00000006904	NOM1	83	60.452	ENSMEUG00000001108	NOM1	71	60.452	Notamacropus_eugenii
ENSFALG00000006904	NOM1	64	59.236	ENSOPRG00000014676	NOM1	70	52.632	Ochotona_princeps
ENSFALG00000006904	NOM1	97	63.676	ENSODEG00000009399	NOM1	98	60.111	Octodon_degus
ENSFALG00000006904	NOM1	99	57.670	ENSONIG00000005958	nom1	86	59.184	Oreochromis_niloticus
ENSFALG00000006904	NOM1	66	74.459	ENSOANG00000006139	-	97	74.459	Ornithorhynchus_anatinus
ENSFALG00000006904	NOM1	99	53.680	ENSOCUG00000021448	-	87	52.237	Oryctolagus_cuniculus
ENSFALG00000006904	NOM1	97	65.357	ENSOCUG00000004071	-	81	64.326	Oryctolagus_cuniculus
ENSFALG00000006904	NOM1	99	56.336	ENSORLG00000010541	nom1	82	57.554	Oryzias_latipes
ENSFALG00000006904	NOM1	99	56.865	ENSORLG00020010789	nom1	89	56.957	Oryzias_latipes_hni
ENSFALG00000006904	NOM1	99	57.163	ENSORLG00015010475	nom1	89	57.246	Oryzias_latipes_hsok
ENSFALG00000006904	NOM1	99	57.725	ENSOMEG00000004219	nom1	82	57.986	Oryzias_melastigma
ENSFALG00000006904	NOM1	88	64.553	ENSOGAG00000001124	NOM1	85	72.640	Otolemur_garnettii
ENSFALG00000006904	NOM1	97	60.204	ENSOARG00000007261	NOM1	93	60.429	Ovis_aries
ENSFALG00000006904	NOM1	97	63.464	ENSPPAG00000041374	NOM1	80	63.010	Pan_paniscus
ENSFALG00000006904	NOM1	97	58.974	ENSPTIG00000013532	NOM1	94	61.158	Panthera_tigris_altaica
ENSFALG00000006904	NOM1	97	63.464	ENSPTRG00000019917	NOM1	80	63.291	Pan_troglodytes
ENSFALG00000006904	NOM1	97	63.781	ENSPANG00000007605	NOM1	80	63.778	Papio_anubis
ENSFALG00000006904	NOM1	99	54.583	ENSPKIG00000005825	nom1	81	54.532	Paramormyrops_kingsleyae
ENSFALG00000006904	NOM1	81	76.007	ENSPSIG00000017848	NOM1	97	75.043	Pelodiscus_sinensis
ENSFALG00000006904	NOM1	99	60.229	ENSPMGG00000002577	nom1	81	58.661	Periophthalmus_magnuspinnatus
ENSFALG00000006904	NOM1	97	63.730	ENSPEMG00000024180	Nom1	79	61.150	Peromyscus_maniculatus_bairdii
ENSFALG00000006904	NOM1	77	73.297	ENSPCIG00000027941	NOM1	58	75.240	Phascolarctos_cinereus
ENSFALG00000006904	NOM1	76	67.803	ENSPFOG00000015771	nom1	81	58.213	Poecilia_formosa
ENSFALG00000006904	NOM1	76	67.803	ENSPLAG00000007856	nom1	80	60.324	Poecilia_latipinna
ENSFALG00000006904	NOM1	99	57.644	ENSPMEG00000014155	nom1	80	60.029	Poecilia_mexicana
ENSFALG00000006904	NOM1	99	59.312	ENSPREG00000008850	nom1	81	58.832	Poecilia_reticulata
ENSFALG00000006904	NOM1	97	59.071	ENSPPYG00000018222	NOM1	79	59.433	Pongo_abelii
ENSFALG00000006904	NOM1	69	66.667	ENSPCAG00000000440	NOM1	64	66.667	Procavia_capensis
ENSFALG00000006904	NOM1	75	70.328	ENSPCOG00000015222	NOM1	98	70.328	Propithecus_coquereli
ENSFALG00000006904	NOM1	97	59.736	ENSPVAG00000014760	NOM1	80	59.801	Pteropus_vampyrus
ENSFALG00000006904	NOM1	99	58.203	ENSPNYG00000006975	nom1	95	67.871	Pundamilia_nyererei
ENSFALG00000006904	NOM1	79	64.505	ENSPNAG00000011085	nom1	80	57.163	Pygocentrus_nattereri
ENSFALG00000006904	NOM1	99	60.231	ENSRNOG00000048969	AABR07059041.1	84	58.916	Rattus_norvegicus
ENSFALG00000006904	NOM1	97	61.484	ENSRBIG00000037042	NOM1	80	61.992	Rhinopithecus_bieti
ENSFALG00000006904	NOM1	97	61.198	ENSRROG00000037293	NOM1	80	61.711	Rhinopithecus_roxellana
ENSFALG00000006904	NOM1	69	30.874	YLR336C	-	52	31.959	Saccharomyces_cerevisiae
ENSFALG00000006904	NOM1	97	65.942	ENSSHAG00000017998	-	99	66.524	Sarcophilus_harrisii
ENSFALG00000006904	NOM1	71	59.557	ENSSHAG00000002835	-	99	68.039	Sarcophilus_harrisii
ENSFALG00000006904	NOM1	70	65.844	ENSSFOG00015003196	nom1	100	65.844	Scleropages_formosus
ENSFALG00000006904	NOM1	99	56.612	ENSSMAG00000011047	nom1	80	58.345	Scophthalmus_maximus
ENSFALG00000006904	NOM1	78	67.831	ENSSDUG00000006834	nom1	81	59.366	Seriola_dumerili
ENSFALG00000006904	NOM1	77	67.472	ENSSLDG00000021812	nom1	81	57.940	Seriola_lalandi_dorsalis
ENSFALG00000006904	NOM1	100	60.357	ENSSPUG00000002556	NOM1	90	77.603	Sphenodon_punctatus
ENSFALG00000006904	NOM1	99	91.026	ENSTGUG00000000702	-	99	88.515	Taeniopygia_guttata
ENSFALG00000006904	NOM1	99	58.110	ENSTRUG00000010239	nom1	83	58.143	Takifugu_rubripes
ENSFALG00000006904	NOM1	99	58.561	ENSTNIG00000012783	nom1	88	57.857	Tetraodon_nigroviridis
ENSFALG00000006904	NOM1	96	62.297	ENSTTRG00000009691	NOM1	81	61.605	Tursiops_truncatus
ENSFALG00000006904	NOM1	97	60.462	ENSUAMG00000025450	NOM1	80	60.423	Ursus_americanus
ENSFALG00000006904	NOM1	97	61.504	ENSUMAG00000014275	NOM1	96	60.429	Ursus_maritimus
ENSFALG00000006904	NOM1	97	61.437	ENSVVUG00000002608	NOM1	60	70.328	Vulpes_vulpes
ENSFALG00000006904	NOM1	99	59.716	ENSXETG00000021611	nom1	82	75.122	Xenopus_tropicalis
ENSFALG00000006904	NOM1	99	58.873	ENSXMAG00000002451	nom1	80	58.112	Xiphophorus_maculatus