EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFALG00000006944 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 15643 bases
Position: chrJH603179.1:1245690-1261332
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007263	PRP21_like_P	PF12230.8	1.7e-52	1	1
ENSFALP00000007261	PRP21_like_P	PF12230.8	4.1e-49	1	1
ENSFALP00000007263	Surp	PF01805.20	2.4e-46	1	2
ENSFALP00000007263	Surp	PF01805.20	2.4e-46	2	2
ENSFALP00000007261	Surp	PF01805.20	3.7e-46	1	2
ENSFALP00000007261	Surp	PF01805.20	3.7e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007293	SF3A1-201	2491	-	ENSFALP00000007261	789 (aa)	-	U3JWV7
ENSFALT00000007295	SF3A1-202	2110	-	ENSFALP00000007263	663 (aa)	-	U3JWV9

Gene Model

Click here to download ENSFALG00000006944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006944's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000006944	SF3A1	100	92.317	ENSG00000099995	SF3A1	95	93.122	Homo_sapiens
ENSFALG00000006944	SF3A1	100	83.899	ENSAPOG00000020465	sf3a1	96	84.301	Acanthochromis_polyacanthus
ENSFALG00000006944	SF3A1	97	92.718	ENSAMEG00000007737	SF3A1	95	93.122	Ailuropoda_melanoleuca
ENSFALG00000006944	SF3A1	100	83.627	ENSACIG00000020672	sf3a1	96	84.037	Amphilophus_citrinellus
ENSFALG00000006944	SF3A1	100	83.627	ENSAOCG00000003060	sf3a1	96	84.433	Amphiprion_ocellaris
ENSFALG00000006944	SF3A1	100	83.753	ENSAPEG00000010735	sf3a1	96	84.433	Amphiprion_percula
ENSFALG00000006944	SF3A1	96	84.485	ENSATEG00000021201	sf3a1	95	83.905	Anabas_testudineus
ENSFALG00000006944	SF3A1	97	98.049	ENSAPLG00000009057	SF3A1	99	98.049	Anas_platyrhynchos
ENSFALG00000006944	SF3A1	100	86.527	ENSACAG00000009415	SF3A1	96	88.616	Anolis_carolinensis
ENSFALG00000006944	SF3A1	100	92.191	ENSANAG00000032045	SF3A1	95	93.519	Aotus_nancymaae
ENSFALG00000006944	SF3A1	100	83.586	ENSACLG00000012622	sf3a1	96	85.450	Astatotilapia_calliptera
ENSFALG00000006944	SF3A1	97	83.791	ENSAMXG00000005382	sf3a1	97	83.816	Astyanax_mexicanus
ENSFALG00000006944	SF3A1	100	91.940	ENSBTAG00000003390	SF3A1	95	93.254	Bos_taurus
ENSFALG00000006944	SF3A1	83	44.241	WBGene00004188	prp-21	88	44.510	Caenorhabditis_elegans
ENSFALG00000006944	SF3A1	100	92.191	ENSCJAG00000010370	SF3A1	95	93.519	Callithrix_jacchus
ENSFALG00000006944	SF3A1	100	91.814	ENSCAFG00000012559	SF3A1	95	93.122	Canis_familiaris
ENSFALG00000006944	SF3A1	100	91.814	ENSCAFG00020000838	SF3A1	95	93.122	Canis_lupus_dingo
ENSFALG00000006944	SF3A1	100	91.814	ENSCHIG00000018642	SF3A1	95	93.122	Capra_hircus
ENSFALG00000006944	SF3A1	100	91.814	ENSTSYG00000004739	SF3A1	95	93.254	Carlito_syrichta
ENSFALG00000006944	SF3A1	95	75.729	ENSCAPG00000015414	SF3A1	96	75.918	Cavia_aperea
ENSFALG00000006944	SF3A1	100	92.065	ENSCPOG00000014589	SF3A1	95	92.989	Cavia_porcellus
ENSFALG00000006944	SF3A1	100	92.191	ENSCCAG00000032006	SF3A1	95	93.519	Cebus_capucinus
ENSFALG00000006944	SF3A1	100	91.814	ENSCATG00000029241	SF3A1	95	93.254	Cercocebus_atys
ENSFALG00000006944	SF3A1	100	91.436	ENSCLAG00000006508	SF3A1	95	92.725	Chinchilla_lanigera
ENSFALG00000006944	SF3A1	100	91.940	ENSCSAG00000009470	SF3A1	95	93.254	Chlorocebus_sabaeus
ENSFALG00000006944	SF3A1	59	97.143	ENSCHOG00000005201	SF3A1	64	97.143	Choloepus_hoffmanni
ENSFALG00000006944	SF3A1	100	92.776	ENSCPBG00000007595	SF3A1	96	93.360	Chrysemys_picta_bellii
ENSFALG00000006944	SF3A1	94	51.660	ENSCING00000008526	-	65	57.393	Ciona_intestinalis
ENSFALG00000006944	SF3A1	96	51.154	ENSCSAVG00000005608	-	91	63.559	Ciona_savignyi
ENSFALG00000006944	SF3A1	100	91.940	ENSCANG00000033564	SF3A1	95	93.254	Colobus_angolensis_palliatus
ENSFALG00000006944	SF3A1	96	93.035	ENSCGRG00001008933	Sf3a1	95	92.857	Cricetulus_griseus_chok1gshd
ENSFALG00000006944	SF3A1	96	93.035	ENSCGRG00000006127	Sf3a1	95	92.857	Cricetulus_griseus_crigri
ENSFALG00000006944	SF3A1	100	80.958	ENSCSEG00000010792	sf3a1	96	82.431	Cynoglossus_semilaevis
ENSFALG00000006944	SF3A1	100	82.116	ENSCVAG00000004560	sf3a1	96	81.481	Cyprinodon_variegatus
ENSFALG00000006944	SF3A1	100	82.346	ENSDARG00000041887	sf3a1	96	83.752	Danio_rerio
ENSFALG00000006944	SF3A1	97	92.397	ENSDNOG00000010629	SF3A1	95	92.744	Dasypus_novemcinctus
ENSFALG00000006944	SF3A1	100	92.191	ENSDORG00000005613	Sf3a1	95	93.254	Dipodomys_ordii
ENSFALG00000006944	SF3A1	77	60.766	FBgn0266917	Sf3a1	68	60.781	Drosophila_melanogaster
ENSFALG00000006944	SF3A1	90	94.333	ENSETEG00000017194	SF3A1	95	92.319	Echinops_telfairi
ENSFALG00000006944	SF3A1	99	66.707	ENSEBUG00000001285	sf3a1	94	68.695	Eptatretus_burgeri
ENSFALG00000006944	SF3A1	100	91.940	ENSEASG00005010254	SF3A1	95	93.254	Equus_asinus_asinus
ENSFALG00000006944	SF3A1	100	91.940	ENSECAG00000023962	SF3A1	95	93.254	Equus_caballus
ENSFALG00000006944	SF3A1	78	92.085	ENSEEUG00000003159	SF3A1	83	93.443	Erinaceus_europaeus
ENSFALG00000006944	SF3A1	100	80.552	ENSELUG00000022578	sf3a1	96	80.683	Esox_lucius
ENSFALG00000006944	SF3A1	100	91.940	ENSFCAG00000011932	SF3A1	95	93.254	Felis_catus
ENSFALG00000006944	SF3A1	100	91.436	ENSFDAG00000009560	SF3A1	95	92.725	Fukomys_damarensis
ENSFALG00000006944	SF3A1	100	82.494	ENSFHEG00000010866	sf3a1	96	83.487	Fundulus_heteroclitus
ENSFALG00000006944	SF3A1	100	79.899	ENSGMOG00000016024	sf3a1	96	79.265	Gadus_morhua
ENSFALG00000006944	SF3A1	100	97.848	ENSGALG00000007937	SF3A1	100	97.848	Gallus_gallus
ENSFALG00000006944	SF3A1	100	82.116	ENSGAFG00000009111	sf3a1	96	82.143	Gambusia_affinis
ENSFALG00000006944	SF3A1	100	81.163	ENSGACG00000011893	sf3a1	96	81.589	Gasterosteus_aculeatus
ENSFALG00000006944	SF3A1	94	95.687	ENSGAGG00000000762	SF3A1	95	93.194	Gopherus_agassizii
ENSFALG00000006944	SF3A1	100	92.317	ENSGGOG00000012631	SF3A1	95	93.122	Gorilla_gorilla
ENSFALG00000006944	SF3A1	100	83.586	ENSHBUG00000015795	sf3a1	96	85.450	Haplochromis_burtoni
ENSFALG00000006944	SF3A1	100	91.688	ENSHGLG00000007907	SF3A1	95	92.989	Heterocephalus_glaber_female
ENSFALG00000006944	SF3A1	100	91.688	ENSHGLG00100013799	SF3A1	95	92.989	Heterocephalus_glaber_male
ENSFALG00000006944	SF3A1	100	79.823	ENSHCOG00000015423	sf3a1	97	80.845	Hippocampus_comes
ENSFALG00000006944	SF3A1	97	80.804	ENSIPUG00000002470	sf3a1	97	80.896	Ictalurus_punctatus
ENSFALG00000006944	SF3A1	100	91.940	ENSSTOG00000013892	SF3A1	95	93.386	Ictidomys_tridecemlineatus
ENSFALG00000006944	SF3A1	97	93.014	ENSJJAG00000022566	Sf3a1	95	93.386	Jaculus_jaculus
ENSFALG00000006944	SF3A1	100	81.486	ENSKMAG00000002400	sf3a1	96	83.113	Kryptolebias_marmoratus
ENSFALG00000006944	SF3A1	100	81.841	ENSLBEG00000022974	sf3a1	96	83.223	Labrus_bergylta
ENSFALG00000006944	SF3A1	100	84.257	ENSLACG00000003565	SF3A1	96	85.997	Latimeria_chalumnae
ENSFALG00000006944	SF3A1	100	84.422	ENSLOCG00000008251	sf3a1	96	85.921	Lepisosteus_oculatus
ENSFALG00000006944	SF3A1	99	58.365	ENSLAFG00000026032	-	96	59.025	Loxodonta_africana
ENSFALG00000006944	SF3A1	100	91.814	ENSLAFG00000000448	SF3A1	95	93.386	Loxodonta_africana
ENSFALG00000006944	SF3A1	100	91.814	ENSMFAG00000031979	SF3A1	95	93.122	Macaca_fascicularis
ENSFALG00000006944	SF3A1	100	91.814	ENSMMUG00000005547	SF3A1	95	93.122	Macaca_mulatta
ENSFALG00000006944	SF3A1	100	91.940	ENSMNEG00000037229	SF3A1	95	93.254	Macaca_nemestrina
ENSFALG00000006944	SF3A1	100	91.940	ENSMLEG00000041908	SF3A1	95	93.254	Mandrillus_leucophaeus
ENSFALG00000006944	SF3A1	96	85.117	ENSMAMG00000006460	sf3a1	95	84.433	Mastacembelus_armatus
ENSFALG00000006944	SF3A1	100	83.586	ENSMZEG00005009633	sf3a1	96	85.450	Maylandia_zebra
ENSFALG00000006944	SF3A1	97	97.917	ENSMGAG00000001330	SF3A1	99	97.917	Meleagris_gallopavo
ENSFALG00000006944	SF3A1	93	89.359	ENSMAUG00000020317	Sf3a1	94	88.950	Mesocricetus_auratus
ENSFALG00000006944	SF3A1	100	91.688	ENSMICG00000010038	SF3A1	95	92.989	Microcebus_murinus
ENSFALG00000006944	SF3A1	100	91.814	ENSMOCG00000008438	Sf3a1	95	93.122	Microtus_ochrogaster
ENSFALG00000006944	SF3A1	100	80.454	ENSMMOG00000015588	sf3a1	96	80.845	Mola_mola
ENSFALG00000006944	SF3A1	100	92.172	ENSMODG00000009270	SF3A1	95	93.907	Monodelphis_domestica
ENSFALG00000006944	SF3A1	100	82.976	ENSMALG00000000148	sf3a1	99	83.265	Monopterus_albus
ENSFALG00000006944	SF3A1	98	91.774	MGP_CAROLIEiJ_G0016029	Sf3a1	95	92.460	Mus_caroli
ENSFALG00000006944	SF3A1	98	91.774	ENSMUSG00000002129	Sf3a1	95	92.460	Mus_musculus
ENSFALG00000006944	SF3A1	98	91.645	MGP_PahariEiJ_G0016862	Sf3a1	95	92.328	Mus_pahari
ENSFALG00000006944	SF3A1	98	91.774	MGP_SPRETEiJ_G0016870	Sf3a1	95	92.460	Mus_spretus
ENSFALG00000006944	SF3A1	100	91.562	ENSMPUG00000013144	SF3A1	95	92.989	Mustela_putorius_furo
ENSFALG00000006944	SF3A1	100	91.688	ENSMLUG00000002139	SF3A1	95	93.254	Myotis_lucifugus
ENSFALG00000006944	SF3A1	100	92.065	ENSNGAG00000016977	Sf3a1	95	92.989	Nannospalax_galili
ENSFALG00000006944	SF3A1	100	83.586	ENSNBRG00000016642	sf3a1	96	85.450	Neolamprologus_brichardi
ENSFALG00000006944	SF3A1	100	91.940	ENSNLEG00000003686	SF3A1	95	93.254	Nomascus_leucogenys
ENSFALG00000006944	SF3A1	96	84.190	ENSMEUG00000008741	SF3A1	95	85.042	Notamacropus_eugenii
ENSFALG00000006944	SF3A1	97	93.333	ENSOPRG00000016636	SF3A1	95	93.254	Ochotona_princeps
ENSFALG00000006944	SF3A1	100	91.803	ENSODEG00000002571	SF3A1	95	92.989	Octodon_degus
ENSFALG00000006944	SF3A1	100	81.967	ENSONIG00000010848	sf3a1	96	84.412	Oreochromis_niloticus
ENSFALG00000006944	SF3A1	100	91.688	ENSOCUG00000007633	SF3A1	95	93.122	Oryctolagus_cuniculus
ENSFALG00000006944	SF3A1	97	82.481	ENSORLG00000013050	sf3a1	95	83.956	Oryzias_latipes
ENSFALG00000006944	SF3A1	97	83.101	ENSORLG00020003236	sf3a1	93	82.703	Oryzias_latipes_hni
ENSFALG00000006944	SF3A1	100	81.967	ENSORLG00015017411	sf3a1	96	83.995	Oryzias_latipes_hsok
ENSFALG00000006944	SF3A1	100	82.323	ENSOMEG00000013362	sf3a1	96	83.862	Oryzias_melastigma
ENSFALG00000006944	SF3A1	100	91.688	ENSOGAG00000012931	SF3A1	95	93.122	Otolemur_garnettii
ENSFALG00000006944	SF3A1	100	89.798	ENSOARG00000006849	SF3A1	95	90.993	Ovis_aries
ENSFALG00000006944	SF3A1	100	91.940	ENSPPAG00000041790	SF3A1	95	92.328	Pan_paniscus
ENSFALG00000006944	SF3A1	100	91.940	ENSPPRG00000004391	SF3A1	95	93.254	Panthera_pardus
ENSFALG00000006944	SF3A1	97	92.626	ENSPTIG00000000844	SF3A1	98	92.989	Panthera_tigris_altaica
ENSFALG00000006944	SF3A1	100	92.317	ENSPTRG00000014240	SF3A1	95	93.122	Pan_troglodytes
ENSFALG00000006944	SF3A1	100	91.940	ENSPANG00000020772	SF3A1	95	93.254	Papio_anubis
ENSFALG00000006944	SF3A1	85	93.982	ENSPSIG00000012803	SF3A1	93	96.693	Pelodiscus_sinensis
ENSFALG00000006944	SF3A1	96	83.486	ENSPMGG00000023096	sf3a1	99	83.422	Periophthalmus_magnuspinnatus
ENSFALG00000006944	SF3A1	96	93.298	ENSPEMG00000009494	Sf3a1	95	93.122	Peromyscus_maniculatus_bairdii
ENSFALG00000006944	SF3A1	82	77.372	ENSPMAG00000007139	-	87	81.359	Petromyzon_marinus
ENSFALG00000006944	SF3A1	100	92.172	ENSPCIG00000022692	SF3A1	95	93.775	Phascolarctos_cinereus
ENSFALG00000006944	SF3A1	100	74.275	ENSPFOG00000016768	sf3a1	93	76.294	Poecilia_formosa
ENSFALG00000006944	SF3A1	100	82.620	ENSPLAG00000017268	sf3a1	96	82.695	Poecilia_latipinna
ENSFALG00000006944	SF3A1	84	84.211	ENSPMEG00000019811	sf3a1	98	82.655	Poecilia_mexicana
ENSFALG00000006944	SF3A1	100	82.997	ENSPREG00000010347	sf3a1	96	83.355	Poecilia_reticulata
ENSFALG00000006944	SF3A1	100	91.940	ENSPPYG00000011707	SF3A1	95	93.254	Pongo_abelii
ENSFALG00000006944	SF3A1	57	95.021	ENSPCAG00000003266	SF3A1	56	95.021	Procavia_capensis
ENSFALG00000006944	SF3A1	100	91.814	ENSPCOG00000026630	SF3A1	95	93.122	Propithecus_coquereli
ENSFALG00000006944	SF3A1	94	92.225	ENSPVAG00000017719	SF3A1	94	91.689	Pteropus_vampyrus
ENSFALG00000006944	SF3A1	100	83.586	ENSPNYG00000018706	sf3a1	96	85.450	Pundamilia_nyererei
ENSFALG00000006944	SF3A1	99	82.107	ENSPNAG00000003721	sf3a1	97	83.289	Pygocentrus_nattereri
ENSFALG00000006944	SF3A1	97	92.119	ENSRNOG00000005218	Sf3a1	95	92.593	Rattus_norvegicus
ENSFALG00000006944	SF3A1	100	91.940	ENSRBIG00000032167	SF3A1	95	93.254	Rhinopithecus_bieti
ENSFALG00000006944	SF3A1	100	91.940	ENSRROG00000044908	SF3A1	95	93.254	Rhinopithecus_roxellana
ENSFALG00000006944	SF3A1	93	93.460	ENSSBOG00000021960	SF3A1	98	93.223	Saimiri_boliviensis_boliviensis
ENSFALG00000006944	SF3A1	98	89.974	ENSSHAG00000003666	SF3A1	96	91.258	Sarcophilus_harrisii
ENSFALG00000006944	SF3A1	100	82.685	ENSSFOG00015004579	sf3a1	96	84.757	Scleropages_formosus
ENSFALG00000006944	SF3A1	100	80.808	ENSSMAG00000004275	sf3a1	96	81.878	Scophthalmus_maximus
ENSFALG00000006944	SF3A1	100	83.480	ENSSDUG00000022219	sf3a1	96	83.884	Seriola_dumerili
ENSFALG00000006944	SF3A1	100	83.480	ENSSLDG00000012642	sf3a1	96	83.884	Seriola_lalandi_dorsalis
ENSFALG00000006944	SF3A1	97	90.458	ENSSARG00000005960	SF3A1	98	89.947	Sorex_araneus
ENSFALG00000006944	SF3A1	96	92.727	ENSSPUG00000018863	SF3A1	96	92.801	Sphenodon_punctatus
ENSFALG00000006944	SF3A1	100	84.005	ENSSPAG00000011856	sf3a1	96	84.544	Stegastes_partitus
ENSFALG00000006944	SF3A1	100	91.688	ENSSSCG00000010002	SF3A1	95	92.989	Sus_scrofa
ENSFALG00000006944	SF3A1	97	98.442	ENSTGUG00000010547	SF3A1	100	98.442	Taeniopygia_guttata
ENSFALG00000006944	SF3A1	100	80.076	ENSTRUG00000006118	sf3a1	96	81.242	Takifugu_rubripes
ENSFALG00000006944	SF3A1	61	82.836	ENSTNIG00000005713	sf3a1	81	84.956	Tetraodon_nigroviridis
ENSFALG00000006944	SF3A1	100	85.264	ENSTBEG00000012771	SF3A1	95	86.376	Tupaia_belangeri
ENSFALG00000006944	SF3A1	100	91.321	ENSTTRG00000001535	SF3A1	95	92.470	Tursiops_truncatus
ENSFALG00000006944	SF3A1	99	90.863	ENSUAMG00000006750	SF3A1	94	92.267	Ursus_americanus
ENSFALG00000006944	SF3A1	98	92.387	ENSUMAG00000016665	SF3A1	96	92.989	Ursus_maritimus
ENSFALG00000006944	SF3A1	100	91.814	ENSVVUG00000003075	SF3A1	95	93.122	Vulpes_vulpes
ENSFALG00000006944	SF3A1	100	84.151	ENSXETG00000016144	sf3a1	95	85.298	Xenopus_tropicalis
ENSFALG00000006944	SF3A1	100	81.864	ENSXCOG00000015653	sf3a1	96	81.878	Xiphophorus_couchianus
ENSFALG00000006944	SF3A1	100	81.990	ENSXMAG00000002753	sf3a1	96	82.011	Xiphophorus_maculatus