EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000006961 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 38682 bases
Position: chrJH603175.1:6968616-7007297
Accession: 101809717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007266	La	PF05383.17	3.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007298	LARP4B-201	6189	-	ENSFALP00000007266	725 (aa)	XP_016151777	U3JWW2

Gene Model

Click here to download ENSFALG00000006961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000006961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000006961	LARP4B	73	41.198	ENSFALG00000002114	LARP4	97	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000006961	LARP4B	100	73.965	ENSG00000107929	LARP4B	100	73.965	Homo_sapiens
ENSFALG00000006961	LARP4B	80	66.723	ENSAPOG00000020531	LARP4B	100	58.268	Acanthochromis_polyacanthus
ENSFALG00000006961	LARP4B	100	73.565	ENSAMEG00000001810	LARP4B	100	73.565	Ailuropoda_melanoleuca
ENSFALG00000006961	LARP4B	90	59.242	ENSAOCG00000007887	-	78	87.500	Amphiprion_ocellaris
ENSFALG00000006961	LARP4B	93	63.866	ENSAPEG00000002512	LARP4B	98	61.769	Amphiprion_percula
ENSFALG00000006961	LARP4B	100	60.077	ENSATEG00000012614	LARP4B	100	61.656	Anabas_testudineus
ENSFALG00000006961	LARP4B	100	93.048	ENSAPLG00000003813	LARP4B	98	93.048	Anas_platyrhynchos
ENSFALG00000006961	LARP4B	100	87.208	ENSACAG00000002858	LARP4B	100	87.208	Anolis_carolinensis
ENSFALG00000006961	LARP4B	100	72.630	ENSANAG00000007531	-	100	72.630	Aotus_nancymaae
ENSFALG00000006961	LARP4B	100	61.067	ENSACLG00000026356	LARP4B	100	61.568	Astatotilapia_calliptera
ENSFALG00000006961	LARP4B	92	56.433	ENSAMXG00000003335	larp4b	93	56.140	Astyanax_mexicanus
ENSFALG00000006961	LARP4B	100	75.000	ENSBTAG00000013899	LARP4B	100	75.000	Bos_taurus
ENSFALG00000006961	LARP4B	100	72.630	ENSCJAG00000018434	LARP4B	100	72.630	Callithrix_jacchus
ENSFALG00000006961	LARP4B	100	73.965	ENSCAFG00020004209	LARP4B	100	73.965	Canis_lupus_dingo
ENSFALG00000006961	LARP4B	100	72.510	ENSCHIG00000013543	LARP4B	100	72.510	Capra_hircus
ENSFALG00000006961	LARP4B	82	80.570	ENSTSYG00000002568	LARP4B	100	80.570	Carlito_syrichta
ENSFALG00000006961	LARP4B	90	73.466	ENSCAPG00000009725	LARP4B	89	73.466	Cavia_aperea
ENSFALG00000006961	LARP4B	100	76.502	ENSCPOG00000009375	LARP4B	100	76.502	Cavia_porcellus
ENSFALG00000006961	LARP4B	100	72.497	ENSCCAG00000024869	LARP4B	100	72.497	Cebus_capucinus
ENSFALG00000006961	LARP4B	100	73.965	ENSCATG00000019750	LARP4B	100	73.965	Cercocebus_atys
ENSFALG00000006961	LARP4B	100	77.915	ENSCLAG00000011570	LARP4B	100	77.915	Chinchilla_lanigera
ENSFALG00000006961	LARP4B	65	82.353	ENSCHOG00000007831	-	64	82.353	Choloepus_hoffmanni
ENSFALG00000006961	LARP4B	100	91.598	ENSCPBG00000017063	LARP4B	100	91.598	Chrysemys_picta_bellii
ENSFALG00000006961	LARP4B	100	72.096	ENSCANG00000038021	LARP4B	100	72.096	Colobus_angolensis_palliatus
ENSFALG00000006961	LARP4B	100	74.967	ENSCGRG00001022930	Larp4b	100	77.029	Cricetulus_griseus_chok1gshd
ENSFALG00000006961	LARP4B	100	74.967	ENSCGRG00000006022	Larp4b	100	77.029	Cricetulus_griseus_crigri
ENSFALG00000006961	LARP4B	100	59.060	ENSCSEG00000007342	LARP4B	100	59.195	Cynoglossus_semilaevis
ENSFALG00000006961	LARP4B	100	59.588	ENSCVAG00000008910	LARP4B	100	59.846	Cyprinodon_variegatus
ENSFALG00000006961	LARP4B	91	54.519	ENSDARG00000062146	larp4b	91	55.391	Danio_rerio
ENSFALG00000006961	LARP4B	96	80.571	ENSDNOG00000045543	-	100	80.594	Dasypus_novemcinctus
ENSFALG00000006961	LARP4B	100	73.333	ENSDORG00000009328	Larp4b	100	75.779	Dipodomys_ordii
ENSFALG00000006961	LARP4B	88	75.342	ENSETEG00000011249	LARP4B	91	75.342	Echinops_telfairi
ENSFALG00000006961	LARP4B	100	74.900	ENSEASG00005019068	-	100	74.900	Equus_asinus_asinus
ENSFALG00000006961	LARP4B	100	74.766	ENSECAG00000024040	LARP4B	100	74.766	Equus_caballus
ENSFALG00000006961	LARP4B	100	70.706	ENSEEUG00000008391	LARP4B	98	70.706	Erinaceus_europaeus
ENSFALG00000006961	LARP4B	89	42.226	ENSELUG00000001417	-	94	42.073	Esox_lucius
ENSFALG00000006961	LARP4B	100	62.339	ENSELUG00000008626	LARP4B	100	62.596	Esox_lucius
ENSFALG00000006961	LARP4B	100	74.635	ENSFCAG00000000721	-	100	74.668	Felis_catus
ENSFALG00000006961	LARP4B	100	75.300	ENSFDAG00000006158	LARP4B	97	75.300	Fukomys_damarensis
ENSFALG00000006961	LARP4B	100	52.880	ENSFHEG00000013037	LARP4B	65	93.277	Fundulus_heteroclitus
ENSFALG00000006961	LARP4B	53	40.103	ENSFHEG00000011539	-	79	40.103	Fundulus_heteroclitus
ENSFALG00000006961	LARP4B	87	53.251	ENSGMOG00000010818	-	91	59.225	Gadus_morhua
ENSFALG00000006961	LARP4B	100	94.650	ENSGALG00000006672	LARP4B	100	94.650	Gallus_gallus
ENSFALG00000006961	LARP4B	100	58.280	ENSGACG00000017535	LARP4B	98	58.824	Gasterosteus_aculeatus
ENSFALG00000006961	LARP4B	94	90.308	ENSGAGG00000008598	LARP4B	100	90.308	Gopherus_agassizii
ENSFALG00000006961	LARP4B	100	74.099	ENSGGOG00000003572	LARP4B	100	74.099	Gorilla_gorilla
ENSFALG00000006961	LARP4B	100	60.078	ENSHBUG00000007535	LARP4B	100	61.076	Haplochromis_burtoni
ENSFALG00000006961	LARP4B	100	75.532	ENSHGLG00000012936	LARP4B	100	78.066	Heterocephalus_glaber_female
ENSFALG00000006961	LARP4B	100	75.600	ENSHGLG00100016220	-	100	75.600	Heterocephalus_glaber_male
ENSFALG00000006961	LARP4B	88	63.692	ENSHGLG00100017261	-	100	63.692	Heterocephalus_glaber_male
ENSFALG00000006961	LARP4B	96	60.256	ENSHCOG00000011581	LARP4B	89	60.256	Hippocampus_comes
ENSFALG00000006961	LARP4B	95	55.430	ENSIPUG00000009705	larp4b	97	55.148	Ictalurus_punctatus
ENSFALG00000006961	LARP4B	100	74.400	ENSSTOG00000000587	LARP4B	100	74.400	Ictidomys_tridecemlineatus
ENSFALG00000006961	LARP4B	100	75.300	ENSJJAG00000020847	Larp4b	100	75.300	Jaculus_jaculus
ENSFALG00000006961	LARP4B	100	60.129	ENSKMAG00000021674	LARP4B	100	60.920	Kryptolebias_marmoratus
ENSFALG00000006961	LARP4B	81	65.169	ENSLBEG00000025293	-	85	65.342	Labrus_bergylta
ENSFALG00000006961	LARP4B	94	74.709	ENSLACG00000009492	LARP4B	100	74.709	Latimeria_chalumnae
ENSFALG00000006961	LARP4B	100	71.370	ENSLOCG00000012290	larp4b	100	71.370	Lepisosteus_oculatus
ENSFALG00000006961	LARP4B	100	78.752	ENSLAFG00000015334	LARP4B	99	80.228	Loxodonta_africana
ENSFALG00000006961	LARP4B	100	73.965	ENSMFAG00000001766	LARP4B	100	71.963	Macaca_fascicularis
ENSFALG00000006961	LARP4B	100	73.965	ENSMMUG00000005279	LARP4B	100	73.965	Macaca_mulatta
ENSFALG00000006961	LARP4B	100	73.832	ENSMNEG00000014019	LARP4B	100	71.829	Macaca_nemestrina
ENSFALG00000006961	LARP4B	100	73.733	ENSMLEG00000035198	LARP4B	100	73.733	Mandrillus_leucophaeus
ENSFALG00000006961	LARP4B	100	60.587	ENSMAMG00000013742	LARP4B	100	61.047	Mastacembelus_armatus
ENSFALG00000006961	LARP4B	94	58.491	ENSMZEG00005014594	-	100	60.082	Maylandia_zebra
ENSFALG00000006961	LARP4B	88	65.049	ENSMZEG00005006498	-	96	66.832	Maylandia_zebra
ENSFALG00000006961	LARP4B	100	88.755	ENSMGAG00000005472	LARP4B	100	88.755	Meleagris_gallopavo
ENSFALG00000006961	LARP4B	100	74.867	ENSMAUG00000021657	Larp4b	100	77.202	Mesocricetus_auratus
ENSFALG00000006961	LARP4B	100	73.626	ENSMICG00000001301	LARP4B	100	73.901	Microcebus_murinus
ENSFALG00000006961	LARP4B	90	76.842	ENSMOCG00000021452	Larp4b	100	76.842	Microtus_ochrogaster
ENSFALG00000006961	LARP4B	100	56.150	ENSMMOG00000011253	-	100	56.818	Mola_mola
ENSFALG00000006961	LARP4B	100	77.973	ENSMODG00000005957	LARP4B	100	77.973	Monodelphis_domestica
ENSFALG00000006961	LARP4B	100	53.981	ENSMALG00000012432	LARP4B	100	54.348	Monopterus_albus
ENSFALG00000006961	LARP4B	100	75.333	MGP_CAROLIEiJ_G0018216	Larp4b	100	77.470	Mus_caroli
ENSFALG00000006961	LARP4B	100	75.133	ENSMUSG00000033499	Larp4b	100	77.375	Mus_musculus
ENSFALG00000006961	LARP4B	100	75.200	MGP_PahariEiJ_G0019266	Larp4b	100	77.296	Mus_pahari
ENSFALG00000006961	LARP4B	100	75.000	MGP_SPRETEiJ_G0019074	Larp4b	100	77.375	Mus_spretus
ENSFALG00000006961	LARP4B	100	72.933	ENSMPUG00000016220	LARP4B	97	73.200	Mustela_putorius_furo
ENSFALG00000006961	LARP4B	96	73.429	ENSMLUG00000005880	LARP4B	99	73.571	Myotis_lucifugus
ENSFALG00000006961	LARP4B	100	74.099	ENSNGAG00000001750	Larp4b	100	74.099	Nannospalax_galili
ENSFALG00000006961	LARP4B	88	57.189	ENSNBRG00000020018	LARP4B	88	57.512	Neolamprologus_brichardi
ENSFALG00000006961	LARP4B	100	73.832	ENSNLEG00000013442	LARP4B	100	73.832	Nomascus_leucogenys
ENSFALG00000006961	LARP4B	83	72.087	ENSMEUG00000013114	-	83	72.087	Notamacropus_eugenii
ENSFALG00000006961	LARP4B	100	73.280	ENSOPRG00000003300	LARP4B	100	73.280	Ochotona_princeps
ENSFALG00000006961	LARP4B	100	72.230	ENSODEG00000001109	LARP4B	100	76.842	Octodon_degus
ENSFALG00000006961	LARP4B	100	61.104	ENSONIG00000017705	LARP4B	100	61.667	Oreochromis_niloticus
ENSFALG00000006961	LARP4B	100	80.713	ENSOANG00000006100	LARP4B	100	80.845	Ornithorhynchus_anatinus
ENSFALG00000006961	LARP4B	100	73.705	ENSOCUG00000004950	LARP4B	97	73.705	Oryctolagus_cuniculus
ENSFALG00000006961	LARP4B	100	59.355	ENSORLG00000006080	LARP4B	100	59.923	Oryzias_latipes
ENSFALG00000006961	LARP4B	100	59.512	ENSORLG00020020940	LARP4B	100	59.949	Oryzias_latipes_hni
ENSFALG00000006961	LARP4B	100	58.333	ENSORLG00015020608	LARP4B	100	59.794	Oryzias_latipes_hsok
ENSFALG00000006961	LARP4B	100	57.915	ENSOMEG00000019619	LARP4B	100	58.612	Oryzias_melastigma
ENSFALG00000006961	LARP4B	96	74.180	ENSOGAG00000011540	LARP4B	99	74.180	Otolemur_garnettii
ENSFALG00000006961	LARP4B	100	72.354	ENSOARG00000015320	LARP4B	98	72.354	Ovis_aries
ENSFALG00000006961	LARP4B	100	73.698	ENSPPAG00000039232	LARP4B	100	73.698	Pan_paniscus
ENSFALG00000006961	LARP4B	100	74.834	ENSPPRG00000009489	LARP4B	100	74.834	Panthera_pardus
ENSFALG00000006961	LARP4B	100	74.700	ENSPTIG00000008543	LARP4B	100	74.700	Panthera_tigris_altaica
ENSFALG00000006961	LARP4B	100	73.698	ENSPTRG00000002235	LARP4B	100	73.698	Pan_troglodytes
ENSFALG00000006961	LARP4B	100	73.965	ENSPANG00000023546	LARP4B	100	71.963	Papio_anubis
ENSFALG00000006961	LARP4B	99	60.000	ENSPKIG00000012368	LARP4B	99	60.400	Paramormyrops_kingsleyae
ENSFALG00000006961	LARP4B	76	92.063	ENSPSIG00000005600	LARP4B	99	92.063	Pelodiscus_sinensis
ENSFALG00000006961	LARP4B	89	55.917	ENSPMGG00000008261	LARP4B	87	53.706	Periophthalmus_magnuspinnatus
ENSFALG00000006961	LARP4B	100	75.434	ENSPEMG00000014052	Larp4b	100	75.434	Peromyscus_maniculatus_bairdii
ENSFALG00000006961	LARP4B	100	58.048	ENSPFOG00000000029	LARP4B	100	59.463	Poecilia_formosa
ENSFALG00000006961	LARP4B	100	60.080	ENSPLAG00000002871	LARP4B	100	59.495	Poecilia_latipinna
ENSFALG00000006961	LARP4B	100	58.612	ENSPMEG00000016361	LARP4B	100	59.588	Poecilia_mexicana
ENSFALG00000006961	LARP4B	100	73.965	ENSPPYG00000002035	LARP4B	97	73.965	Pongo_abelii
ENSFALG00000006961	LARP4B	100	72.326	ENSPCOG00000014688	LARP4B	100	72.326	Propithecus_coquereli
ENSFALG00000006961	LARP4B	82	73.167	ENSPVAG00000009784	LARP4B	83	73.167	Pteropus_vampyrus
ENSFALG00000006961	LARP4B	100	60.774	ENSPNYG00000024252	LARP4B	100	61.568	Pundamilia_nyererei
ENSFALG00000006961	LARP4B	91	56.869	ENSPNAG00000028956	larp4b	93	56.721	Pygocentrus_nattereri
ENSFALG00000006961	LARP4B	99	74.766	ENSRNOG00000015888	Larp4b	100	75.033	Rattus_norvegicus
ENSFALG00000006961	LARP4B	100	73.832	ENSRBIG00000033294	LARP4B	100	73.832	Rhinopithecus_bieti
ENSFALG00000006961	LARP4B	100	73.832	ENSRROG00000033879	LARP4B	100	73.832	Rhinopithecus_roxellana
ENSFALG00000006961	LARP4B	100	67.690	ENSSBOG00000021109	LARP4B	100	67.690	Saimiri_boliviensis_boliviensis
ENSFALG00000006961	LARP4B	100	80.438	ENSSHAG00000013392	LARP4B	100	80.438	Sarcophilus_harrisii
ENSFALG00000006961	LARP4B	96	61.411	ENSSFOG00015003256	LARP4B	90	62.637	Scleropages_formosus
ENSFALG00000006961	LARP4B	83	88.889	ENSSMAG00000005982	-	99	88.889	Scophthalmus_maximus
ENSFALG00000006961	LARP4B	100	60.875	ENSSDUG00000006704	LARP4B	100	62.214	Seriola_dumerili
ENSFALG00000006961	LARP4B	86	71.429	ENSSLDG00000020660	LARP4B	96	71.429	Seriola_lalandi_dorsalis
ENSFALG00000006961	LARP4B	65	90.654	ENSSARG00000001243	-	79	90.654	Sorex_araneus
ENSFALG00000006961	LARP4B	89	90.136	ENSSPUG00000013734	-	100	90.136	Sphenodon_punctatus
ENSFALG00000006961	LARP4B	100	84.986	ENSSPUG00000002102	-	100	84.986	Sphenodon_punctatus
ENSFALG00000006961	LARP4B	100	57.923	ENSSPAG00000014628	LARP4B	100	57.923	Stegastes_partitus
ENSFALG00000006961	LARP4B	100	71.791	ENSSSCG00000011162	LARP4B	100	73.864	Sus_scrofa
ENSFALG00000006961	LARP4B	100	96.311	ENSTGUG00000000811	-	100	96.311	Taeniopygia_guttata
ENSFALG00000006961	LARP4B	100	57.051	ENSTNIG00000004571	-	98	57.106	Tetraodon_nigroviridis
ENSFALG00000006961	LARP4B	99	55.969	ENSTNIG00000007991	LARP4B	99	58.908	Tetraodon_nigroviridis
ENSFALG00000006961	LARP4B	90	75.542	ENSTTRG00000011151	LARP4B	90	75.542	Tursiops_truncatus
ENSFALG00000006961	LARP4B	87	74.771	ENSUAMG00000016461	LARP4B	95	74.771	Ursus_americanus
ENSFALG00000006961	LARP4B	100	74.000	ENSUMAG00000016127	LARP4B	100	74.000	Ursus_maritimus
ENSFALG00000006961	LARP4B	100	73.698	ENSVVUG00000008641	LARP4B	100	73.698	Vulpes_vulpes
ENSFALG00000006961	LARP4B	99	78.984	ENSXETG00000016882	larp4b	100	78.984	Xenopus_tropicalis
ENSFALG00000006961	LARP4B	100	54.370	ENSXCOG00000019952	LARP4B	72	83.824	Xiphophorus_couchianus
ENSFALG00000006961	LARP4B	100	58.656	ENSXMAG00000021533	LARP4B	100	59.459	Xiphophorus_maculatus