EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000007042 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Plus strand
Length: 23805 bases
Position: chrJH603257.1:3351937-3375741
Accession: 101809119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007355	KH_1	PF00013.29	7.8e-11	1	1
ENSFALP00000007355	DEAD	PF00270.29	1.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007387	-	3970	-	ENSFALP00000007355	664 (aa)	XP_005044196	U3JX51

Gene Model

Click here to download ENSFALG00000007042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000007042	-	52	32.362	ENSFALG00000002343	EIF4A3	95	32.362
ENSFALG00000007042	-	52	33.240	ENSFALG00000013672	DDX18	52	33.240
ENSFALG00000007042	-	51	30.495	ENSFALG00000009300	DDX55	60	30.769
ENSFALG00000007042	-	66	31.767	ENSFALG00000002703	DDX59	69	31.767
ENSFALG00000007042	-	56	41.953	ENSFALG00000010910	DDX4	51	41.953
ENSFALG00000007042	-	54	33.058	ENSFALG00000009831	DDX6	78	32.308
ENSFALG00000007042	-	52	30.518	ENSFALG00000005149	DDX25	84	30.518
ENSFALG00000007042	-	65	46.032	ENSFALG00000012560	DDX17	58	46.032
ENSFALG00000007042	-	59	39.604	ENSFALG00000008731	DDX41	63	39.651
ENSFALG00000007042	-	59	36.842	ENSFALG00000004884	DDX27	52	37.240
ENSFALG00000007042	-	52	35.014	ENSFALG00000013043	-	60	32.381
ENSFALG00000007042	-	60	30.067	ENSFALG00000001468	DDX31	63	30.067
ENSFALG00000007042	-	65	43.478	ENSFALG00000002317	DDX5	70	43.478
ENSFALG00000007042	-	52	31.180	ENSFALG00000010555	-	79	31.006
ENSFALG00000007042	-	58	37.245	ENSFALG00000011391	DDX47	83	36.296
ENSFALG00000007042	-	63	40.183	ENSFALG00000001530	-	75	40.183
ENSFALG00000007042	-	57	34.606	ENSFALG00000005155	DDX52	68	34.053
ENSFALG00000007042	-	53	32.955	ENSFALG00000008230	EIF4A2	85	32.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007042	-	98	58.754	ENSAPOG00000001712	ddx43	81	63.979	Acanthochromis_polyacanthus
ENSFALG00000007042	-	98	53.917	ENSACIG00000012170	ddx43	85	56.849	Amphilophus_citrinellus
ENSFALG00000007042	-	85	66.034	ENSAOCG00000001331	ddx43	81	66.090	Amphiprion_ocellaris
ENSFALG00000007042	-	98	60.863	ENSAPEG00000001133	ddx43	80	67.073	Amphiprion_percula
ENSFALG00000007042	-	99	60.448	ENSATEG00000012664	ddx43	84	65.299	Anabas_testudineus
ENSFALG00000007042	-	84	83.808	ENSAPLG00000010182	-	99	88.260	Anas_platyrhynchos
ENSFALG00000007042	-	91	73.642	ENSACAG00000004387	-	96	74.637	Anolis_carolinensis
ENSFALG00000007042	-	98	59.165	ENSACLG00000026081	ddx43	84	64.706	Astatotilapia_calliptera
ENSFALG00000007042	-	84	68.366	ENSAMXG00000004457	ddx43	93	61.982	Astyanax_mexicanus
ENSFALG00000007042	-	72	45.808	WBGene00013214	Y54G11A.3	96	46.029	Caenorhabditis_elegans
ENSFALG00000007042	-	56	49.086	ENSCSEG00000000532	ddx43	81	54.088	Cynoglossus_semilaevis
ENSFALG00000007042	-	84	54.833	ENSCVAG00000009980	ddx43	80	56.929	Cyprinodon_variegatus
ENSFALG00000007042	-	98	61.185	ENSDARG00000022614	ddx43	80	67.888	Danio_rerio
ENSFALG00000007042	-	92	48.602	FBgn0037549	CG7878	87	49.595	Drosophila_melanogaster
ENSFALG00000007042	-	76	44.950	ENSETEG00000014626	-	98	44.208	Echinops_telfairi
ENSFALG00000007042	-	61	46.559	ENSETEG00000019547	-	73	45.000	Echinops_telfairi
ENSFALG00000007042	-	88	64.081	ENSELUG00000012126	ddx43	89	64.081	Esox_lucius
ENSFALG00000007042	-	71	70.190	ENSFHEG00000011226	ddx43	87	69.439	Fundulus_heteroclitus
ENSFALG00000007042	-	67	68.610	ENSGMOG00000004178	ddx43	97	68.610	Gadus_morhua
ENSFALG00000007042	-	66	89.220	ENSGALG00000015928	-	99	89.220	Gallus_gallus
ENSFALG00000007042	-	98	58.102	ENSGAFG00000012622	ddx43	85	62.500	Gambusia_affinis
ENSFALG00000007042	-	82	66.245	ENSGACG00000012072	ddx43	99	64.706	Gasterosteus_aculeatus
ENSFALG00000007042	-	99	69.839	ENSGAGG00000025230	-	99	69.693	Gopherus_agassizii
ENSFALG00000007042	-	98	58.718	ENSHBUG00000011653	ddx43	87	62.255	Haplochromis_burtoni
ENSFALG00000007042	-	79	64.925	ENSHCOG00000014704	ddx43	81	65.918	Hippocampus_comes
ENSFALG00000007042	-	99	61.481	ENSIPUG00000023423	ddx43	98	61.367	Ictalurus_punctatus
ENSFALG00000007042	-	98	60.059	ENSKMAG00000016167	ddx43	95	60.239	Kryptolebias_marmoratus
ENSFALG00000007042	-	98	59.043	ENSLBEG00000007913	ddx43	86	64.154	Labrus_bergylta
ENSFALG00000007042	-	71	72.074	ENSLACG00000000741	ddx43	100	72.074	Latimeria_chalumnae
ENSFALG00000007042	-	98	62.158	ENSLOCG00000016170	ddx43	96	62.158	Lepisosteus_oculatus
ENSFALG00000007042	-	98	56.166	ENSMAMG00000022128	ddx43	96	56.166	Mastacembelus_armatus
ENSFALG00000007042	-	98	59.165	ENSMZEG00005027349	ddx43	84	64.706	Maylandia_zebra
ENSFALG00000007042	-	87	84.749	ENSMGAG00000013832	-	100	84.749	Meleagris_gallopavo
ENSFALG00000007042	-	88	62.689	ENSMMOG00000007346	ddx43	88	62.689	Mola_mola
ENSFALG00000007042	-	89	67.736	ENSMODG00000018546	-	92	67.613	Monodelphis_domestica
ENSFALG00000007042	-	88	60.580	ENSMODG00000014335	-	99	60.580	Monodelphis_domestica
ENSFALG00000007042	-	91	61.783	ENSMALG00000020673	ddx43	83	64.544	Monopterus_albus
ENSFALG00000007042	-	98	60.243	ENSNBRG00000010942	ddx43	96	60.243	Neolamprologus_brichardi
ENSFALG00000007042	-	98	60.514	ENSONIG00000001195	ddx43	96	59.670	Oreochromis_niloticus
ENSFALG00000007042	-	55	73.387	ENSOANG00000006467	-	100	71.802	Ornithorhynchus_anatinus
ENSFALG00000007042	-	89	62.069	ENSORLG00000002267	ddx43	92	62.069	Oryzias_latipes
ENSFALG00000007042	-	84	64.737	ENSORLG00020018592	ddx43	88	64.737	Oryzias_latipes_hni
ENSFALG00000007042	-	89	62.252	ENSORLG00015004854	ddx43	91	61.905	Oryzias_latipes_hsok
ENSFALG00000007042	-	89	63.192	ENSOMEG00000023418	ddx43	95	63.192	Oryzias_melastigma
ENSFALG00000007042	-	98	60.060	ENSPKIG00000002941	ddx43	83	65.862	Paramormyrops_kingsleyae
ENSFALG00000007042	-	82	81.636	ENSPSIG00000002202	-	99	75.120	Pelodiscus_sinensis
ENSFALG00000007042	-	55	51.064	ENSPMGG00000019854	ddx43	91	51.571	Periophthalmus_magnuspinnatus
ENSFALG00000007042	-	65	76.852	ENSPCIG00000017981	-	98	76.852	Phascolarctos_cinereus
ENSFALG00000007042	-	85	59.541	ENSPCIG00000002492	-	91	59.541	Phascolarctos_cinereus
ENSFALG00000007042	-	85	64.103	ENSPFOG00000004241	ddx43	85	63.043	Poecilia_formosa
ENSFALG00000007042	-	85	64.274	ENSPLAG00000023362	ddx43	85	63.211	Poecilia_latipinna
ENSFALG00000007042	-	86	63.729	ENSPMEG00000004870	ddx43	85	63.043	Poecilia_mexicana
ENSFALG00000007042	-	85	57.941	ENSPREG00000000923	ddx43	83	57.612	Poecilia_reticulata
ENSFALG00000007042	-	98	56.798	ENSPNYG00000009064	ddx43	81	63.110	Pundamilia_nyererei
ENSFALG00000007042	-	98	61.840	ENSPNAG00000001232	ddx43	81	67.067	Pygocentrus_nattereri
ENSFALG00000007042	-	85	65.194	ENSSHAG00000016933	-	98	65.194	Sarcophilus_harrisii
ENSFALG00000007042	-	85	68.301	ENSSHAG00000001847	-	95	65.902	Sarcophilus_harrisii
ENSFALG00000007042	-	84	63.556	ENSSFOG00015012193	ddx43	89	63.556	Scleropages_formosus
ENSFALG00000007042	-	89	62.927	ENSSMAG00000019288	ddx43	84	62.019	Scophthalmus_maximus
ENSFALG00000007042	-	98	58.884	ENSSDUG00000020120	ddx43	83	64.716	Seriola_dumerili
ENSFALG00000007042	-	98	59.193	ENSSLDG00000017225	ddx43	83	63.366	Seriola_lalandi_dorsalis
ENSFALG00000007042	-	73	71.227	ENSSPUG00000018097	-	99	71.227	Sphenodon_punctatus
ENSFALG00000007042	-	85	66.725	ENSSPAG00000006858	ddx43	86	65.225	Stegastes_partitus
ENSFALG00000007042	-	89	93.613	ENSTGUG00000012684	-	99	93.613	Taeniopygia_guttata
ENSFALG00000007042	-	84	61.168	ENSTRUG00000012795	ddx43	85	61.168	Takifugu_rubripes
ENSFALG00000007042	-	84	63.432	ENSTNIG00000009822	ddx43	97	63.972	Tetraodon_nigroviridis
ENSFALG00000007042	-	98	67.221	ENSXETG00000011767	ddx43	88	72.128	Xenopus_tropicalis
ENSFALG00000007042	-	71	71.125	ENSXCOG00000013810	ddx43	73	70.146	Xiphophorus_couchianus
ENSFALG00000007042	-	98	58.850	ENSXMAG00000017126	ddx43	85	63.062	Xiphophorus_maculatus