EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFALG00000007136 (Gene tree)
Gene ID: -
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Ficedula_albicollis
Status: putative
Strand: Minus strand
Length: 24598 bases
Position: chrJH603177.1:8572581-8597178
Accession: 4861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFALP00000007445	ResIII	PF04851.15	7.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFALT00000007477	HELLS-201	2676	-	ENSFALP00000007445	828 (aa)	-	U3JXE1

Gene Model

Click here to download ENSFALG00000007136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFALG00000007136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFALG00000007136	HELLS	54	36.500	ENSFALG00000009480	RAD54L	67	33.624
ENSFALG00000007136	HELLS	70	44.765	ENSFALG00000004987	SMARCA5	55	46.528
ENSFALG00000007136	HELLS	68	44.667	ENSFALG00000000209	SMARCA1	59	44.667
ENSFALG00000007136	HELLS	67	36.796	ENSFALG00000006089	SMARCAD1	53	36.796
ENSFALG00000007136	HELLS	57	49.495	ENSFALG00000006087	CHD1L	54	49.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFALG00000007136	HELLS	99	81.387	ENSG00000119969	HELLS	99	82.725	Homo_sapiens
ENSFALG00000007136	HELLS	95	65.944	ENSAPOG00000007707	hells	98	66.162	Acanthochromis_polyacanthus
ENSFALG00000007136	HELLS	99	80.657	ENSAMEG00000013525	HELLS	98	81.265	Ailuropoda_melanoleuca
ENSFALG00000007136	HELLS	86	68.776	ENSACIG00000018996	hells	99	69.339	Amphilophus_citrinellus
ENSFALG00000007136	HELLS	98	66.953	ENSAOCG00000006348	hells	95	67.936	Amphiprion_ocellaris
ENSFALG00000007136	HELLS	98	66.953	ENSAPEG00000001422	hells	95	67.936	Amphiprion_percula
ENSFALG00000007136	HELLS	98	67.813	ENSATEG00000008107	hells	99	66.378	Anabas_testudineus
ENSFALG00000007136	HELLS	95	95.420	ENSAPLG00000002649	HELLS	99	95.420	Anas_platyrhynchos
ENSFALG00000007136	HELLS	87	78.225	ENSACAG00000028785	HELLS	96	78.225	Anolis_carolinensis
ENSFALG00000007136	HELLS	99	81.364	ENSANAG00000034765	-	99	82.378	Aotus_nancymaae
ENSFALG00000007136	HELLS	98	66.502	ENSACLG00000007613	hells	99	66.502	Astatotilapia_calliptera
ENSFALG00000007136	HELLS	83	69.855	ENSAMXG00000002088	hells	99	69.714	Astyanax_mexicanus
ENSFALG00000007136	HELLS	81	83.658	ENSBTAG00000005979	HELLS	99	83.658	Bos_taurus
ENSFALG00000007136	HELLS	99	81.242	ENSCJAG00000015819	HELLS	99	82.092	Callithrix_jacchus
ENSFALG00000007136	HELLS	99	80.755	ENSCAFG00000008090	HELLS	97	81.608	Canis_familiaris
ENSFALG00000007136	HELLS	98	78.218	ENSCAFG00020004809	HELLS	98	81.679	Canis_lupus_dingo
ENSFALG00000007136	HELLS	99	79.487	ENSCHIG00000019462	HELLS	97	80.098	Capra_hircus
ENSFALG00000007136	HELLS	99	80.414	ENSTSYG00000005811	-	99	82.251	Carlito_syrichta
ENSFALG00000007136	HELLS	99	81.022	ENSCPOG00000003043	HELLS	98	81.630	Cavia_porcellus
ENSFALG00000007136	HELLS	55	83.041	ENSCCAG00000026761	HELLS	96	83.041	Cebus_capucinus
ENSFALG00000007136	HELLS	99	76.817	ENSCATG00000033830	HELLS	99	82.659	Cercocebus_atys
ENSFALG00000007136	HELLS	99	80.414	ENSCLAG00000003938	HELLS	99	81.022	Chinchilla_lanigera
ENSFALG00000007136	HELLS	86	82.560	ENSCSAG00000006181	HELLS	99	82.560	Chlorocebus_sabaeus
ENSFALG00000007136	HELLS	86	88.202	ENSCPBG00000025739	HELLS	99	90.504	Chrysemys_picta_bellii
ENSFALG00000007136	HELLS	99	76.586	ENSCANG00000037736	HELLS	99	82.138	Colobus_angolensis_palliatus
ENSFALG00000007136	HELLS	99	81.242	ENSCGRG00001017410	Hells	99	80.390	Cricetulus_griseus_chok1gshd
ENSFALG00000007136	HELLS	94	67.561	ENSCSEG00000016985	hells	99	67.561	Cynoglossus_semilaevis
ENSFALG00000007136	HELLS	63	66.411	ENSCVAG00000000159	hells	97	66.411	Cyprinodon_variegatus
ENSFALG00000007136	HELLS	95	69.785	ENSDARG00000057738	hells	95	69.306	Danio_rerio
ENSFALG00000007136	HELLS	76	84.810	ENSDNOG00000017758	HELLS	99	84.810	Dasypus_novemcinctus
ENSFALG00000007136	HELLS	99	80.900	ENSDORG00000011812	Hells	98	81.022	Dipodomys_ordii
ENSFALG00000007136	HELLS	71	56.219	ENSEBUG00000016152	hells	93	56.219	Eptatretus_burgeri
ENSFALG00000007136	HELLS	99	81.144	ENSEASG00005011764	HELLS	99	81.242	Equus_asinus_asinus
ENSFALG00000007136	HELLS	99	80.999	ENSECAG00000018810	HELLS	98	81.608	Equus_caballus
ENSFALG00000007136	HELLS	73	93.478	ENSEEUG00000007680	HELLS	77	93.478	Erinaceus_europaeus
ENSFALG00000007136	HELLS	96	67.462	ENSELUG00000014909	hells	93	67.076	Esox_lucius
ENSFALG00000007136	HELLS	86	82.700	ENSFCAG00000005206	HELLS	99	82.948	Felis_catus
ENSFALG00000007136	HELLS	99	80.049	ENSFDAG00000010042	HELLS	99	80.049	Fukomys_damarensis
ENSFALG00000007136	HELLS	99	66.586	ENSFHEG00000022950	hells	95	66.586	Fundulus_heteroclitus
ENSFALG00000007136	HELLS	99	89.769	ENSGALG00000005451	HELLS	99	95.827	Gallus_gallus
ENSFALG00000007136	HELLS	98	65.809	ENSGAFG00000001204	hells	94	65.809	Gambusia_affinis
ENSFALG00000007136	HELLS	94	67.471	ENSGACG00000003897	hells	91	67.471	Gasterosteus_aculeatus
ENSFALG00000007136	HELLS	84	90.216	ENSGAGG00000010269	HELLS	99	90.216	Gopherus_agassizii
ENSFALG00000007136	HELLS	99	76.886	ENSGGOG00000008103	HELLS	99	82.444	Gorilla_gorilla
ENSFALG00000007136	HELLS	98	67.607	ENSHBUG00000010270	hells	99	66.502	Haplochromis_burtoni
ENSFALG00000007136	HELLS	99	80.535	ENSHGLG00000011377	-	99	81.144	Heterocephalus_glaber_female
ENSFALG00000007136	HELLS	73	81.595	ENSHGLG00000006537	-	100	81.595	Heterocephalus_glaber_female
ENSFALG00000007136	HELLS	88	72.428	ENSHGLG00100001957	-	96	72.177	Heterocephalus_glaber_male
ENSFALG00000007136	HELLS	99	80.292	ENSHGLG00100017230	-	99	80.900	Heterocephalus_glaber_male
ENSFALG00000007136	HELLS	86	66.620	ENSHCOG00000001119	hells	97	66.620	Hippocampus_comes
ENSFALG00000007136	HELLS	99	68.856	ENSIPUG00000002634	HELLS	95	68.856	Ictalurus_punctatus
ENSFALG00000007136	HELLS	99	82.117	ENSSTOG00000021976	HELLS	99	82.725	Ictidomys_tridecemlineatus
ENSFALG00000007136	HELLS	98	78.133	ENSJJAG00000000865	Hells	99	78.624	Jaculus_jaculus
ENSFALG00000007136	HELLS	99	66.951	ENSKMAG00000017279	hells	95	67.439	Kryptolebias_marmoratus
ENSFALG00000007136	HELLS	98	69.448	ENSLBEG00000027807	hells	94	69.448	Labrus_bergylta
ENSFALG00000007136	HELLS	99	81.630	ENSLAFG00000007049	HELLS	99	82.238	Loxodonta_africana
ENSFALG00000007136	HELLS	99	81.121	ENSMFAG00000044053	HELLS	99	82.659	Macaca_fascicularis
ENSFALG00000007136	HELLS	99	74.856	ENSMMUG00000017255	HELLS	99	82.779	Macaca_mulatta
ENSFALG00000007136	HELLS	99	76.817	ENSMNEG00000042628	HELLS	99	82.659	Macaca_nemestrina
ENSFALG00000007136	HELLS	99	81.121	ENSMLEG00000041751	HELLS	99	82.659	Mandrillus_leucophaeus
ENSFALG00000007136	HELLS	94	67.471	ENSMAMG00000009850	hells	99	69.899	Mastacembelus_armatus
ENSFALG00000007136	HELLS	98	67.607	ENSMZEG00005018414	hells	99	66.502	Maylandia_zebra
ENSFALG00000007136	HELLS	96	93.633	ENSMGAG00000006818	HELLS	97	96.833	Meleagris_gallopavo
ENSFALG00000007136	HELLS	97	79.650	ENSMAUG00000021941	Hells	97	80.176	Mesocricetus_auratus
ENSFALG00000007136	HELLS	69	83.652	ENSMICG00000046554	-	95	83.652	Microcebus_murinus
ENSFALG00000007136	HELLS	99	79.659	ENSMOCG00000019342	Hells	99	79.659	Microtus_ochrogaster
ENSFALG00000007136	HELLS	98	62.287	ENSMMOG00000007950	hells	97	62.728	Mola_mola
ENSFALG00000007136	HELLS	97	80.697	ENSMODG00000005589	-	50	82.636	Monodelphis_domestica
ENSFALG00000007136	HELLS	98	63.916	ENSMALG00000010244	hells	94	63.916	Monopterus_albus
ENSFALG00000007136	HELLS	99	80.877	MGP_CAROLIEiJ_G0022930	Hells	99	80.877	Mus_caroli
ENSFALG00000007136	HELLS	99	80.512	ENSMUSG00000025001	Hells	99	80.512	Mus_musculus
ENSFALG00000007136	HELLS	99	81.364	MGP_PahariEiJ_G0014423	Hells	99	81.364	Mus_pahari
ENSFALG00000007136	HELLS	99	80.755	MGP_SPRETEiJ_G0023848	Hells	99	80.755	Mus_spretus
ENSFALG00000007136	HELLS	99	80.562	ENSMPUG00000017131	HELLS	97	81.174	Mustela_putorius_furo
ENSFALG00000007136	HELLS	99	81.296	ENSMLUG00000030511	HELLS	97	81.296	Myotis_lucifugus
ENSFALG00000007136	HELLS	99	81.387	ENSNGAG00000014049	Hells	98	81.873	Nannospalax_galili
ENSFALG00000007136	HELLS	98	62.315	ENSNBRG00000024242	hells	99	62.315	Neolamprologus_brichardi
ENSFALG00000007136	HELLS	99	76.701	ENSNLEG00000012987	HELLS	99	82.278	Nomascus_leucogenys
ENSFALG00000007136	HELLS	99	79.684	ENSODEG00000015916	HELLS	98	79.684	Octodon_degus
ENSFALG00000007136	HELLS	98	67.730	ENSONIG00000013166	hells	94	67.853	Oreochromis_niloticus
ENSFALG00000007136	HELLS	99	85.036	ENSOANG00000005139	HELLS	99	85.645	Ornithorhynchus_anatinus
ENSFALG00000007136	HELLS	99	82.582	ENSOCUG00000026731	HELLS	98	82.582	Oryctolagus_cuniculus
ENSFALG00000007136	HELLS	99	66.343	ENSORLG00000000987	hells	97	65.201	Oryzias_latipes
ENSFALG00000007136	HELLS	99	66.343	ENSORLG00020003952	hells	97	64.591	Oryzias_latipes_hni
ENSFALG00000007136	HELLS	99	66.707	ENSORLG00015010960	hells	97	64.591	Oryzias_latipes_hsok
ENSFALG00000007136	HELLS	99	66.100	ENSOMEG00000000135	hells	94	67.072	Oryzias_melastigma
ENSFALG00000007136	HELLS	99	80.414	ENSOGAG00000017145	HELLS	98	81.022	Otolemur_garnettii
ENSFALG00000007136	HELLS	99	81.319	ENSOARG00000004495	HELLS	97	81.929	Ovis_aries
ENSFALG00000007136	HELLS	99	77.251	ENSPPAG00000001726	HELLS	99	82.865	Pan_paniscus
ENSFALG00000007136	HELLS	86	82.841	ENSPPRG00000005839	HELLS	99	83.092	Panthera_pardus
ENSFALG00000007136	HELLS	99	81.074	ENSPTIG00000007647	HELLS	99	83.092	Panthera_tigris_altaica
ENSFALG00000007136	HELLS	99	77.129	ENSPTRG00000002778	HELLS	99	82.378	Pan_troglodytes
ENSFALG00000007136	HELLS	99	76.817	ENSPANG00000033528	HELLS	99	82.659	Papio_anubis
ENSFALG00000007136	HELLS	98	68.088	ENSPKIG00000010890	hells	98	66.095	Paramormyrops_kingsleyae
ENSFALG00000007136	HELLS	95	87.452	ENSPSIG00000005462	HELLS	99	87.452	Pelodiscus_sinensis
ENSFALG00000007136	HELLS	98	61.754	ENSPMGG00000014690	hells	99	68.543	Periophthalmus_magnuspinnatus
ENSFALG00000007136	HELLS	99	75.152	ENSPEMG00000017579	Hells	99	75.152	Peromyscus_maniculatus_bairdii
ENSFALG00000007136	HELLS	93	63.030	ENSPMAG00000004376	hells	96	62.672	Petromyzon_marinus
ENSFALG00000007136	HELLS	99	81.785	ENSPCIG00000013361	HELLS	97	82.396	Phascolarctos_cinereus
ENSFALG00000007136	HELLS	99	64.520	ENSPFOG00000001954	hells	95	64.885	Poecilia_formosa
ENSFALG00000007136	HELLS	99	64.642	ENSPLAG00000006504	hells	97	66.011	Poecilia_latipinna
ENSFALG00000007136	HELLS	99	64.520	ENSPMEG00000003024	hells	97	65.871	Poecilia_mexicana
ENSFALG00000007136	HELLS	99	64.520	ENSPREG00000020337	hells	95	64.885	Poecilia_reticulata
ENSFALG00000007136	HELLS	99	77.074	ENSPPYG00000002502	HELLS	98	77.650	Pongo_abelii
ENSFALG00000007136	HELLS	99	75.518	ENSPCAG00000013618	HELLS	98	76.127	Procavia_capensis
ENSFALG00000007136	HELLS	99	78.795	ENSPCOG00000023985	HELLS	99	82.948	Propithecus_coquereli
ENSFALG00000007136	HELLS	80	82.682	ENSPVAG00000017899	HELLS	90	82.682	Pteropus_vampyrus
ENSFALG00000007136	HELLS	98	64.286	ENSPNYG00000009100	hells	99	64.286	Pundamilia_nyererei
ENSFALG00000007136	HELLS	96	65.389	ENSPNAG00000029968	hells	97	65.389	Pygocentrus_nattereri
ENSFALG00000007136	HELLS	99	81.364	ENSRNOG00000047104	Hells	98	81.364	Rattus_norvegicus
ENSFALG00000007136	HELLS	99	81.364	ENSRNOG00000047692	LOC100911660	99	81.364	Rattus_norvegicus
ENSFALG00000007136	HELLS	99	75.842	ENSRBIG00000041080	HELLS	99	81.766	Rhinopithecus_bieti
ENSFALG00000007136	HELLS	99	77.013	ENSRROG00000040169	HELLS	99	82.514	Rhinopithecus_roxellana
ENSFALG00000007136	HELLS	99	81.907	ENSSHAG00000014358	HELLS	99	82.518	Sarcophilus_harrisii
ENSFALG00000007136	HELLS	96	70.088	ENSSFOG00015017895	hells	98	69.268	Scleropages_formosus
ENSFALG00000007136	HELLS	98	67.239	ENSSMAG00000017423	hells	99	65.271	Scophthalmus_maximus
ENSFALG00000007136	HELLS	98	68.466	ENSSDUG00000016924	hells	99	66.173	Seriola_dumerili
ENSFALG00000007136	HELLS	98	66.216	ENSSLDG00000018960	hells	94	66.708	Seriola_lalandi_dorsalis
ENSFALG00000007136	HELLS	99	83.069	ENSSPUG00000017425	HELLS	100	85.031	Sphenodon_punctatus
ENSFALG00000007136	HELLS	95	66.456	ENSSPAG00000015579	hells	99	66.472	Stegastes_partitus
ENSFALG00000007136	HELLS	99	81.486	ENSSSCG00000010486	HELLS	98	82.095	Sus_scrofa
ENSFALG00000007136	HELLS	99	97.077	ENSTGUG00000007157	HELLS	98	97.077	Taeniopygia_guttata
ENSFALG00000007136	HELLS	95	67.513	ENSTRUG00000000350	hells	95	67.115	Takifugu_rubripes
ENSFALG00000007136	HELLS	98	57.264	ENSTNIG00000003738	hells	99	58.252	Tetraodon_nigroviridis
ENSFALG00000007136	HELLS	99	80.414	ENSUAMG00000003343	HELLS	99	81.144	Ursus_americanus
ENSFALG00000007136	HELLS	99	80.877	ENSUMAG00000004748	HELLS	98	84.018	Ursus_maritimus
ENSFALG00000007136	HELLS	99	80.268	ENSVPAG00000010115	HELLS	98	80.877	Vicugna_pacos
ENSFALG00000007136	HELLS	99	81.074	ENSVVUG00000022808	HELLS	97	81.685	Vulpes_vulpes
ENSFALG00000007136	HELLS	99	63.049	ENSXCOG00000013840	hells	97	63.049	Xiphophorus_couchianus
ENSFALG00000007136	HELLS	99	64.642	ENSXMAG00000005731	hells	98	65.217	Xiphophorus_maculatus